Contig 008475:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019K24Sequence347005111 (9)234008475 (5)gb|KJB70541.1|4e-33hypothetical protein B456_011G079800 [Gossypium raimondii]
JMSF013J01Sequence348005111 (9)322008475 (5)gb|KJB70541.1|2e-55hypothetical protein B456_011G079800 [Gossypium raimondii]
JMSF013J09Sequence350005111 (9)603008475 (5)gb|EYU21599.1|4e-81hypothetical protein MIMGU_mgv1a009096mg [Erythranthe guttata]
JMSF018J08Sequence231005111 (9)347008475 (5)ref|XP_011040004.1|3e-59PREDICTED: serine-threonine kinase receptor-associated protein [Populus euphrat
JMSF026A20Sequence347005111 (9)566008475 (5)gb|EYU21599.1|1e-64hypothetical protein MIMGU_mgv1a009096mg [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF018J08+                       ATCGACCAGATGCACCACCAAGGCAAATTGACGGTGGTCCTGGTTCG
                      ____________________________________________________________
consensus                          ATCGACCAGATGCACCACCAAGGCAAATTGACGGTGGTCCTGGTTCG
 
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rJMSF018J08+          GTTAGGACAGTTGCTTGGCTCCATAATGACCAAACCATATTAAGTTCCTGCAGTGATACG
rJMFF019K24+                                            CCATATTAAGTTCCTGCAGTGATNCG
rJMSF026A20+          GTTAGGACAGTTGCTTGGCTCCATAATGACCAAACCATATTAAGTTCCTGCAGTGATACG
rJMSF013J01+             AGGACAGTTGCTNGGCTCCATAATGACCAAACCATATTAAGTTCCTGCAGTGATACG
rJMSF013J09+          GTTAGGACAGTTGCTTGGCTCCATAATGACCAAACCATATTAAGTTCCTGCAGTGATACG
                      ____________________________________________________________
consensus             GTTAGGACAGTTGCTTGGCTCCATAATGACCAAACCATATTAAGTTCCTGCAGTGATACG
 
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rJMSF018J08+          AGTGGAGTGAGATTATGGGATTTAAGAAGCTGTGAAGTTGTTCGAACCCTTGATACCAAG
rJMFF019K24+          AGTGGAGTGAGATTATGGGATTTAAGAAGCTGTGAAGTTGTTNGAACCCTTGATACCAAG
rJMSF026A20+          AGTGGAGTGAGATTATGGGATTTAAGAAGCTGTGAAGTTGTTCGAACCCTTGATACCAAG
rJMSF013J01+          AGTGGAGTGAGATTATGGGATTTAAGAAGCTGTGAAGTTGTTCGAACCCTTGATACCAAG
rJMSF013J09+          AGTGGAGTGAGATTATGGGATTTAAGAAGCTGTGAAGTTGTTCGAACCCTTGATACCAAG
                      ____________________________________________________________
consensus             AGTGGAGTGAGATTATGGGATTTAAGAAGCTGTGAAGTTGTTCGAACCCTTGATACCAAG
 
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rJMSF018J08+          TCTTCTGTAACCAGTGCTGAAGTGAGTCGAGATGGCCACTACATAACTACTGCTGATGGT
rJMFF019K24+          TNTTCTGTAACCAGTGNTGAAGTGAGTCGAGATGGCCACTACATAACTACTGNTGATGGT
rJMSF026A20+          TCTTCTGTAACCAGTGCTGAAGTGAGTCGAGATGGCCACTACATAACTACTGCTGATGGT
rJMSF013J01+          TCTTCTGTAACCAGTGCTGAAGTGAGTCGAGATGGCCACTACATAACTACTGCTGATGGT
rJMSF013J09+          TCTTCTGTAACCAGTGCTGAAGTGAGTCGAGATGGCCACTACATAACTACTGCTGATGGT
                      ____________________________________________________________
consensus             TCTTCTGTAACCAGTGCTGAAGTGAGTCGAGATGGCCACTACATAACTACTGCTGATGGT
 
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rJMSF018J08+          TCCTCTGTTAAGTTTTGGGATGCAAATCAATTTAGATTGGTAAAGAGCTATGACATGCCC
rJMFF019K24+          TCCTCTGTTAAGTTTTGGGATGCAAATCAATTTAGATTGGTAAAGAGCTATGACATGCCC
rJMSF026A20+          TCCTCTGTTAAGTTTTGGGATGCAAATCAATTTAGATTGGTAAAGAGCTATGACATGCCC
rJMSF013J01+          TCCTCTGTTAAGTTTTGGGATGCAAATCAATTTAGATTGGTAAAGAGCTATGACATGCCC
rJMSF013J09+          TCCTCTGTTAAGTTTTGGGATGCAAATCAATTTAGATTGGTAAAGAGCTATGACATGCCC
                      ____________________________________________________________
consensus             TCCTCTGTTAAGTTTTGGGATGCAAATCAATTTAGATTGGTAAAGAGCTATGACATGCCC
 
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rJMSF018J08+          TGCAATGTTGAATCTGCTTCATTAGAACCAAGGTTCGGAAAANGGTTCATTGCCGGAG  
rJMFF019K24+          TGCAATGTTGAATCTGCTTCATTAGA                                  
rJMSF026A20+          TGCAATGTTGAATCTGCTTCATTAGAACCAAGGTTCGGAAAAAGGTTCATTGCCGGAGGG
rJMSF013J01+          TGCAATGTTGAATCTGCTTCATTAGAACCAAGGTTCGGAAAAAGGTTCATTGCCGGAGGG
rJMSF013J09+          TGCAATGTTGAATCTGCTTCATTAGAACCAAGGTTCGGAAAAAGGTTCATTGCCGGAGTG
                      ____________________________________________________________
consensus             TGCAATGTTGAATCTGCTTCATTAGAACCAAGGTTCGGAAAAAGGTTCATTGCCGGAGGG
 
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rJMSF026A20+          GTAGACATGNGGGGTTCGTCTCTTTGACTTTCACNCTGGAGAACAAATNGGATGCAACAA
rJMSF013J01+          GAAGACATG-TGGGTTCGTCTCTT                                    
rJMSF013J09+          GAAGACATG-NGGNTTCGTCTCTTTGACTTTCACNCTGGAGAACAAATTGGATGCAACAA
                      ____________________________________________________________
consensus             GAAGACATG-TGGGTTCGTCTCTTTGACTTTCACNCTGGAGAACAAATTGGATGCAACAA
 
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rJMSF026A20+          GGGACACCATGGTCCTGTGCATNGTGTGCGTTTCTCTCCAGGAGGAGANTNTTNTGNTTC
rJMSF013J09+          GGGACACCATGGTCCTGTGCATTGTGTGCGTTTCTCTCCAGGAGGNGAATCTTNTGNTTC
                      ____________________________________________________________
consensus             GGGACACCATGGTCCTGTGCATTGTGTGCGTTTCTCTCCAGGAGGAGAATCTTNTGNTTC
 
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rJMSF026A20+          AGGTTCNGAAGACGGGACAATTAGAATATGGCAGACTGG                     
rJMSF013J09+          AGGTTCTGNAGACGGGACAATTAGAATATGGCAGACTGGGCCAAACGAGGCCACCGATGC
                      ____________________________________________________________
consensus             AGGTTCTGAAGACGGGACAATTAGAATATGGCAGACTGGGCCAAACGAGGCCACCGATGC
 
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rJMSF013J09+          ATCAGCTGGACCACNTAAGCCTAAGGTGNTGAAAGANGTCAANGTTGAGATTGACAAGNT
                      ____________________________________________________________
consensus             ATCAGCTGGACCACNTAAGCCTAAGGTGNTGAAAGANGTCAANGTTGAGATTGACAAGNT
 
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rJMSF013J09+          ACATATNGCCAAAGGGGCAANGATTGATGNCGATANNGNGAACGAAGAATGATCGATGTC
                      ____________________________________________________________
consensus             ACATATNGCCAAAGGGGCAANGATTGATGNCGATANNGNGAACGAAGAATGATCGATGTC