Contig 008466:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011M08Sequence116002134 (2)746008466 (3)ref|XP_011080796.1|8e-71PREDICTED: uncharacterized protein LOC105163956 isoform X2 [Sesamum indicum]
JMSF011N08Sequence246002134 (2)773008466 (3)ref|XP_011080796.1|3e-76PREDICTED: uncharacterized protein LOC105163956 isoform X2 [Sesamum indicum]
JMSF014F01Sequence273017793emb|CDP09187.1|4e-15unnamed protein product [Coffea canephora]765008466 (3)ref|XP_011080796.1|4e-72PREDICTED: uncharacterized protein LOC105163956 isoform X2 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF011M08+                                        ATTCAGACNAGCTTCAAAGAGTCATTGGGA
rJMSF014F01+                    AAGGGAGATGACTACGAGGTATTCAGACAAGCTTCAAAGAGTCATTGGGA
rJMSF011N08+                TGCTAAGGGAGATGACTACGAGGTATTCAGACAAGCTTCAAAGAGTCATTGGGA
                      ____________________________________________________________
consensus                   TGCTAAGGGAGATGACTACGAGGTATTCAGACAAGCTTCAAAGAGTCATTGGGA
 
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rJMSF011M08+          ATCTATGAAATTCTACTATCAGGAGGCTACATCAGCTTTTACCAATGGCGAAAGGGGGTA
rJMSF014F01+          ATCTATGAAATTCTACTATCAGAAGGCTACATCAGCTTTTACCAATGGCGAAAGGGGGTA
rJMSF011N08+          ATCTATGAAATTCTACTATCAGGAGGCTACATCAGCTTTTACCAATGGCGAAAGGGGGTA
                      ____________________________________________________________
consensus             ATCTATGAAATTCTACTATCAGGAGGCTACATCAGCTTTTACCAATGGCGAAAGGGGGTA
 
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rJMSF011M08+          TGCTGCTTATCTCTCTGAACAGGGTAGCTCACAAATCAGAAAGGCTCAAGAAGCTGAC-A
rJMSF014F01+          TGCTGCTTATCTCTCTGAACAGGGTAGCTCACAAATCAGAAAGGCTCAAGAAGCTGACAA
rJMSF011N08+          TGCTGCTTATCTCTCTGAACAGGGTAGCTCACAAATCAGAAAGGCTCAAGAAGCTGAC-A
                      ____________________________________________________________
consensus             TGCTGCTTATCTCTCTGAACAGGGTAGCTCACAAATCAGAAAGGCTCAAGAAGCTGAC-A
 
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rJMSF011M08+          AAAAAGCCAGCCTGGATATATTTGATGCTAGAAACAAGAGCATAGAAAACGTGATTACTA
rJMSF014F01+          AAAAAGCCAGCCTGGATATA-TTGATGCTAGAAACAAGAGCATAGAAAACGTGATTACTA
rJMSF011N08+          AAAAAGCCAGCCTGGATATATTTGATGCTAGAAACAAGAGCATAGAAAACGTGATTACTA
                      ____________________________________________________________
consensus             AAAAAGCCAGCCTGGATATATTTGATGCTAGAAACAAGAGCATAGAAAACGTGATTACTA
 
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rJMSF011M08+          TTGACTTGCATGGACAGCATGTCAAACAAGCAATGGAGTTTTTGAAACTGCACCTGCTAT
rJMSF014F01+          TTGACTTGCATGGACAGCATGTCAAACAAGCAATGGAGTTTTTGAAACTGCACCTGCTAT
rJMSF011N08+          TTGACTTGCATGGACAGCATGTCAAACAAGCAATGGAGTTTTTGAAACTGCACCTGCTAT
                      ____________________________________________________________
consensus             TTGACTTGCATGGACAGCATGTCAAACAAGCAATGGAGTTTTTGAAACTGCACCTGCTAT
 
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rJMSF011M08+          TTGGGGCATATGTACGCTCTGTGCGATCATTTAAGGTTATCACTGGATGTGGGAGCCATG
rJMSF014F01+          TTGGGGCATATGTACGCTCTGTGCGATCATTTAAGGTTATCACTGGATGTGGGAGCCATG
rJMSF011N08+          TTGGGGCATATGTACGCTCTGTGCGATCATTTAAGGTTATCACTGGATGTGGGAGCCATG
                      ____________________________________________________________
consensus             TTGGGGCATATGTACGCTCTGTGCGATCATTTAAGGTTATCACTGGATGTGGGAGCCATG
 
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rJMSF011M08+          GTGTTGGGAAGTCTAAGCTGAAAACCTCGGTAATCAATCTATTGGATAAAGAAGGTATTG
rJMSF014F01+          GTGTTGGGAAGTCTAAGCTGAAAACCTCGGTAATCAATCTATTGGATAAAGAAGGTATTG
rJMSF011N08+          GTGTTGGGAAGTCTAAGCTGAAAACCTCGGTAATCAATCTATTGGATAAAGAAGGTATTG
                      ____________________________________________________________
consensus             GTGTTGGGAAGTCTAAGCTGAAAACCTCGGTAATCAATCTATTGGATAAAGAAGGTATTG
 
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rJMSF011M08+          AATGGAGAGAGGAAAACAGGGGAGCATTGCTCATCAAGCTTCATGGGCAAACGAATTTCA
rJMSF014F01+          AATGGAGAGAGGAAAACAGGGGAGCATTGCTCATCAAGCTTCATGGGCAAACGAATTTCA
rJMSF011N08+          AATGGAGAGAGGAAAACAGGGGAGCATTGCTCATCAAGCTTCATGGGCAAACGAATTTCA
                      ____________________________________________________________
consensus             AATGGAGAGAGGAAAACAGGGGAGCATTGCTCATCAAGCTTCATGGGCAAACGAATTTCA
 
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rJMSF011M08+          GCTTCGTAGATTCTGACAGCGATAGCGATGACTGAGTATTCACAACCATTTAGGTTTCTT
rJMSF014F01+          GCTTCGTAGATTCTGACAGCGATAGCGATGACTGAGTATTCACAACCATTTAGGTTTCTT
rJMSF011N08+          GCTTCGTAGATTCTGACAGCGATAGCGATGACTGAGTATTCACAACCATTTAGGTTTCTT
                      ____________________________________________________________
consensus             GCTTCGTAGATTCTGACAGCGATAGCGATGACTGAGTATTCACAACCATTTAGGTTTCTT
 
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rJMSF011M08+          ATCAGGGGCAGCTAATATATATTAGTTCCTGACTTCTGTATGATTTATAATAGTTAGCAT
rJMSF014F01+          ATCAGGGGCAGCTAATATATATTAGTTCCTGACTTCTGTATGATTTATAATAGTTAGCAT
rJMSF011N08+          ATCAGGGGCAGCTAATATATATTAGTTCCTGACTTCTGTATGATTTATAATAGTTAGCAT
                      ____________________________________________________________
consensus             ATCAGGGGCAGCTAATATATATTAGTTCCTGACTTCTGTATGATTTATAATAGTTAGCAT
 
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rJMSF011M08+          CTCTAGATTGTAACCCTTGTTTGTAACTCTAGATGCTTGAGTTATGATACTCTGCCCTAT
rJMSF014F01+          CTCTAGATTGTAACCCTTGTTTGTAACTCTAGATGCTTGAGTTATGATACTCTGCCCTAT
rJMSF011N08+          CTCTAGATTGTAACCCTTGTTTGTAACTCTAGATGCTTGAGTTATGATACTCTGCCCTAT
                      ____________________________________________________________
consensus             CTCTAGATTGTAACCCTTGTTTGTAACTCTAGATGCTTGAGTTATGATACTCTGCCCTAT
 
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rJMSF011M08+          GTACAGCTGCTTGACATAGGTTCCCCTGGGAAGCAGAGCGGAGACTCTTGACTTCTTCCC
rJMSF014F01+          GTACAGCTGCTTGACATAGGTTCCCCTGGGAAGCAGAGCGGAGACTCTTGACTTCTTCCC
rJMSF011N08+          GTACAGCTGCTTGACATAGGTTCCCCTGGGAAGCAGAGCGGAGACTCTTGACTTCTTCCC
                      ____________________________________________________________
consensus             GTACAGCTGCTTGACATAGGTTCCCCTGGGAAGCAGAGCGGAGACTCTTGACTTCTTCCC
 
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rJMSF011M08+          GGTAAAGAGGTATTTTGTAATGATCGTGCCTCATGTTGTATCTTAGGCCGACCACA    
rJMSF014F01+          GGTAAAGAGGTATTTTGTAATGATCGTGCCTCATGTTGTATCTTAGGCCGACCACA    
rJMSF011N08+          GGTAAAGAGGTATTTTGTAATGATCGTGCCTCATGTTGTATCTTAGGCCGACCACATAAA
                      ____________________________________________________________
consensus             GGTAAAGAGGTATTTTGTAATGATCGTGCCTCATGTTGTATCTTAGGCCGACCACATAAA