Contig 008465:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011F15Sequence255002469 (5)739008465 (5)ref|XP_009587659.1|7e-101PREDICTED: protein trichome birefringence-like 36 [Nicotiana tomentosiformis]
JMSF011L23Sequence272002469 (5)736008465 (5)ref|XP_009587659.1|1e-97PREDICTED: protein trichome birefringence-like 36 [Nicotiana tomentosiformis]
JMSF015O20Sequence247002469 (5)emb|CDO99906.1|6e-06unnamed protein product [Coffea canephora]745008465 (5)ref|XP_009587659.1|3e-101PREDICTED: protein trichome birefringence-like 36 [Nicotiana tomentosiformis]
JMSF050G23Sequence621002469 (5)emb|CDO99906.1|7e-59unnamed protein product [Coffea canephora]702008465 (5)ref|XP_009587659.1|5e-93PREDICTED: protein trichome birefringence-like 36 [Nicotiana tomentosiformis]
JMSF050J02Sequence640002469 (5)emb|CDO99906.1|2e-91unnamed protein product [Coffea canephora]705008465 (5)ref|XP_009587659.1|2e-94PREDICTED: protein trichome birefringence-like 36 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF015O20+ GTGGAATGAAGCAAGGAGCAGAAAAC
rJMSF011F15+ GGAGCAGAAAAC
rJMSF011L23+ GGAGCAGAAACC
                      ____________________________________________________________
consensus GTGGAATGAAGCAAGGAGCAGAAAAC
 
. : . : . : . : . : . :
rJMSF015O20+ AAGAGAATACTGCATCTTGATTTGATAGAAGAGAATGCAAGGTACTGGAGAGGCTCTGAT
rJMSF050J02+ GCATCTTGATTTGATAGAAGAGAATGCAAGGTACTGGAGAGGCTCTGAT
rJMSF050G23+ TGATTTGATAGAAGAGAATGCAAGGTACTGGAGAGGCTCTGAT
rJMSF011F15+ AAGAGAATACTGCATCTTGATTTGATAGAAGAGAATGCAAGGTACTGGAGAGGCTCTGAT
rJMSF011L23+ AAGAGAATACTGCATCTTGATTTGATAGAAGAGAATGCAAGGTACTGGAGAGGCTCTGAT
                      ____________________________________________________________
consensus AAGAGAATACTGCATCTTGATTTGATAGAAGAGAATGCAAGGTACTGGAGAGGCTCTGAT
 
. : . : . : . : . : . :
rJMSF015O20+ GTGCTTGTGTTTGATTCAGCTCATTGGTGGACTCATTCTCAAAACCGGAGCTCGTGGGAT
rJMSF050J02+ GTGCTTGTGTTTGATTCAGCTCATTGGTGGACTCATTCTCAAAACCGGAGCTCGTGGGAT
rJMSF050G23+ GTGCTTGTGTTTGATTCAGCTCATTGGTGGACTCATTCTCAAAACCGGAGCTCGTGGGAT
rJMSF011F15+ GTGCTTGTGTTTGATTCAGCTCATTGGTGGACTCATTCTCAAAACCGGAGCTCGTGGGAT
rJMSF011L23+ GTGCTTGTGTTTGATTCAGCTCATTGGTGGACTCATTCTCAAAACCGGAGCTCGTGGGAT
                      ____________________________________________________________
consensus GTGCTTGTGTTTGATTCAGCTCATTGGTGGACTCATTCTCAAAACCGGAGCTCGTGGGAT
 
. : . : . : . : . : . :
rJMSF015O20+ TATATTATGGAGGGTACCAATTTCTTCAGATATATGAACCCTATGGTTGCCTATGAGAAA
rJMSF050J02+ TATATTATGGAGGGTACCAATTTCTTCAGATATATGAACCCTATGGTTGCCTATGAGAAA
rJMSF050G23+ TATATTATGGAGGGTACCAATTTCTTCAGATATATGAACCCTATGGTTGCCTATGAGAAA
rJMSF011F15+ TATATTATGGAGGGTACCAATTTCTTCAGATATATGAACCCTATGGTTGCCTATGAGAAA
rJMSF011L23+ TATATTATGGAGGGTACCAATTTCTTCAGATATATGAACCCTATGGTTGCCTATGAGAAA
                      ____________________________________________________________
consensus TATATTATGGAGGGTACCAATTTCTTCAGATATATGAACCCTATGGTTGCCTATGAGAAA
 
. : . : . : . : . : . :
rJMSF015O20+ GGGCTCATGACATGGGCTAAATGGATAGACTTAAACGTCGATCCCAGGAAAAGCCGAGTC
rJMSF050J02+ GGGCTCATGACATGGGCTAAATGGATAGACTTAAACGTCGATCCCAGGAAAAGCCGAGTC
rJMSF050G23+ GGGCTCATGACATGGGCTAAATGGATAGACTTAAACGTCGATCCCAGGAAAAGCCGAGTC
rJMSF011F15+ GGGCTCATGACATGGGCTAAATGGATAGACTTAAACGTCGATCCCAGGAAAAGCCGAGTC
rJMSF011L23+ GGGCTCATGACATGGGCTAAATGGATAGACTTAAACGTCGATCCCAGGAAAAGCCGAGTC
                      ____________________________________________________________
consensus GGGCTCATGACATGGGCTAAATGGATAGACTTAAACGTCGATCCCAGGAAAAGCCGAGTC
 
. : . : . : . : . : . :
rJMSF015O20+ TTCTTCAGAAGCATGTCGCCTAAGCATAACAGAGAAAACGGGTGGAAATGTTTCAACGAG
rJMSF050J02+ TTCTTCAGAAGCATGTCGCCTAAGCATAACAGAGAAAACGGGTGGAAATGTTTCAACGAG
rJMSF050G23+ TTCTTCAGAAGCATGTCGCCTAAGCATAACAGAGAAAACGGGTGGAAATGTTTCAACGAG
rJMSF011F15+ TTCTTCAGAAGCATGTCGCCTAAGCATAACAGAGAAAACGGGTGGAAATGTTTCAACGAG
rJMSF011L23+ TTCTTCAGAAGCATGTCGCCTAAGCATAACAGAGAAAACGGGTGGAAATGTTTCAACGAG
                      ____________________________________________________________
consensus TTCTTCAGAAGCATGTCGCCTAAGCATAACAGAGAAAACGGGTGGAAATGTTTCAACGAG
 
. : . : . : . : . : . :
rJMSF015O20+ AGGGAGCCTCTGGAGCACTTTAGTCGCCCCCGAGTACCTCAACAGCTGGTGGTACTAAAA
rJMSF050J02+ AGGGAGCCTCTGGAGCACTTTAGTCGCCCCCGAGTACCTCAACAGCTGGTGGTACTAAAA
rJMSF050G23+ AGGGAGCCTCTGGAGCACTTTAGTCGCCCCCGAGTACCTCAACAGCTGGTGGTACTAAAA
rJMSF011F15+ AGGGAGCCTCTGGAGCACTTTAGTCGCCCCCGAGTACCTCAACAGCTGGTGGTACTAAAA
rJMSF011L23+ AGGGAGCCTCTGGAGCACTTTAGTCGCCCCCGAGTACCTCAACAGCTGGTGGTACTAAAA
                      ____________________________________________________________
consensus AGGGAGCCTCTGGAGCACTTTAGTCGCCCCCGAGTACCTCAACAGCTGGTGGTACTAAAA
 
. : . : . : . : . : . :
rJMSF015O20+ CAGGTGCTGAGAAGGATGAACTTCCCGGTGTATTTGCAGGATATCAGTACAATGTCAGCG
rJMSF050J02+ CAGGTGCTGAGAAGGATGAACTTCCCGGTGTATTTGCAGGATATCAGTACAATGTCAGCG
rJMSF050G23+ CAGGTGCTGAGAAGGATGAACTTCCCGGTGTATTTGCAGGATATCAGTACAATGTCAGCG
rJMSF011F15+ CAGGTGCTGAGAAGGATGAACTTCCCGGTGTATTTGCAGGATATCAGTACAATGTCAGCG
rJMSF011L23+ CAGGTGCTGAGAAGGATGAACTTCCCGGTGTATTTGCAGGATATCAGTACAATGTCAGCG
                      ____________________________________________________________
consensus CAGGTGCTGAGAAGGATGAACTTCCCGGTGTATTTGCAGGATATCAGTACAATGTCAGCG
 
. : . : . : . : . : . :
rJMSF015O20+ TTTAGAAGAGACGCTCATCCCTCCGTTTATGGTAAAGTCGTAGGTCAAGAAGAGAAGCAG
rJMSF050J02+ TTTAGAAGAGACGCTCATCCCTCCGTTTATGGTAAAGTCGTAGGTCAAGAAGAGAAGCAG
rJMSF050G23+ TTTAGAAGAGACGCTCATCCCTCCGTTTATGGTAAAGTCGTAGGTCAAGAAGAGAAGCAG
rJMSF011F15+ TTTAGAAGAGACGCTCATCCCTCCGTTTATGGTAAAGTCGTAGGTCAAGAAGAGAAGCAG
rJMSF011L23+ TTTAGAAGAGACGCTCATCCCTCCGTTTGTGGTAAAGTCGTAGGTCAAGAAGAGAAGCAG
                      ____________________________________________________________
consensus TTTAGAAGAGACGCTCATCCCTCCGTTTATGGTAAAGTCGTAGGTCAAGAAGAGAAGCAG
 
. : . : . : . : . : . :
rJMSF015O20+ CACCTCCGAGGCTACAAATCCGATTGTAGCCACTGGTGCCTTCCTGGCGTGCCCGATATT
rJMSF050J02+ CACCTCCGAGGCTACAAATCCGATTGTAGCCACTGGTGCCTTCCTGGCGTGCCCGATATT
rJMSF050G23+ CACCTCCGAGGCTACAAATCCGATTGTAGCCACTGGTGCCTTCCTGGCGTGCCCGATATT
rJMSF011F15+ CACCTCCGAGGCTACAAATCCGATTGTAGCCACTGGTGCCTTCCTGGCGTGCCCGATATT
rJMSF011L23+ CACCTCCGAGGCTACAAATCCGATTGTAGCCACTGGTGCCTTCCTGGCGTGCCCGATATT
                      ____________________________________________________________
consensus CACCTCCGAGGCTACAAATCCGATTGTAGCCACTGGTGCCTTCCTGGCGTGCCCGATATT
 
. : . : . : . : . : . :
rJMSF015O20+ TGGAATGAGATGTTGAATGCCATGCTCTAGAGCCTTAGCTTGTCTCTAAGTGTGAAAGGT
rJMSF050J02+ TGGAATGAGATGTTGAATGCCATGCTCTAGAGCCTTAGCTTGTCTCTAAGTGTGAAAGGT
rJMSF050G23+ TGGAATGAGATGTTGAATGCCATGCTCTAGAGCCTTAGCTTGTCTCTAAGTGTGAAAGGT
rJMSF011F15+ TGGAATGAGATGTTGAATGCCATGCTCTAGAGCCTTAGCTTGTCTCTAAGTGTGAAAGGT
rJMSF011L23+ TGGAATGAGATGTTGAATGCCATGCTCTAGAGCCTTAGCTTGTCTCTAAGTGTGAAAGGT
                      ____________________________________________________________
consensus TGGAATGAGATGTTGAATGCCATGCTCTAGAGCCTTAGCTTGTCTCTAAGTGTGAAAGGT
 
. : . : . : . : . : . :
rJMSF015O20+ GTCTCATGCTGTATAAGCTCTAGGGATGGGTCATTGAGATCTCTTGTCTCAAAAGATCTG
rJMSF050J02+ GTCTCATGCTGTATAAGCTCTAGGGATGGGTCATTGAGATCTCTTGTCTCAAAAGATCTG
rJMSF050G23+ GTCTCATGCTGTATAAGCTCTAGGGATGGGTCATTGAGATCTCTTGTCTCAAAAGATCTG
rJMSF011F15+ GTCTCATGCTGTATAAGCTCTAGGGATGGGTCATTGAGATCTCTTGTCTCAAAAGATCTG
rJMSF011L23+ GTCTCATGCTGTATAAGCTCTAGGGATGGGTCATTGAGATCTCTTGTCTCAAAAGATCTG
                      ____________________________________________________________
consensus GTCTCATGCTGTATAAGCTCTAGGGATGGGTCATTGAGATCTCTTGTCTCAAAAGATCTG
 
. : . : . : . : . : . :
rJMSF015O20+ TTGAGTTTCTTTTCCCTTTTCTCTTTCTTTCTTTGTGAAAAGTTGTTGAC
rJMSF050J02+ TTGAGTTTCTTTTCCCTTTTCTCTTTCTTTCTTTGTGAAAAGTTGT
rJMSF050G23+ TTGAGTTTCTTTTCCCTTTTCTCTTTCTTTCTTTGTGAAAAGTTGTTGAC
rJMSF011F15+ TTGAGTTTCTTTTCCCTTTTCTCTTTCTTTCTTTGTGAAAAGTTGTTGAC
rJMSF011L23+ TTGAGTTTCTTTTCCCTTTTCTCTTTCTTTCTTTGTGAAAAGTTGTTGACCTTGAGTTAA
                      ____________________________________________________________
consensus TTGAGTTTCTTTTCCCTTTTCTCTTTCTTTCTTTGTGAAAAGTTGTTGACCTTGAGTTAA