Contig 008459:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005P11Sequence264011916 (2)ref|XP_009790563.1|78.6PREDICTED: uncharacterized protein LOC104238005 [Nicotiana sylvestris]372008459 (3)
JMSF010H21Sequence285010603 (3)762008459 (3)ref|XP_010315092.1|5e-45PREDICTED: uncharacterized protein LOC101244909 isoform X2 [Solanum lycopersicu
JMSF020E02Sequence659019979ref|XP_006359284.1|8e-50PREDICTED: dentin sialophosphoprotein-like isoform X5 [Solanum tuberosum]795008459 (3)ref|XP_010315088.1|1e-52PREDICTED: uncharacterized protein LOC101244909 isoform X1 [Solanum lycopersicu

Alignment

This contig is upended


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rJMSF020E02+                                       AATGAAAAAAGNTAGAGAAGCAGCTCCCTTC
                      ____________________________________________________________
consensus                                          AATGAAAAAAGNTAGAGAAGCAGCTCCCTTC
 
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rJMSF020E02+          AGGGTTCAAATCTGAAAATCACAGTGATATGAATGGGATCAACATGAAAGATCCTATGCA
rJMSF010H21+                            TCACAGTGATATGAATGGGATCAACATGAAAGATCCTATGCA
                      ____________________________________________________________
consensus             AGGGTTCAAATCTGAAAATCACAGTGATATGAATGGGATCAACATGAAAGATCCTATGCA
 
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rJMSF020E02+          ATTAGATTCTTCAATACTACTGGAAAGCTCTTCCATCAGTTCAGGAATGGATGAAGTTTC
rJMSF010H21+          ATTAGATTCTTCAATACTACTGGAAAGCTCTTCCATCAGTTCAGGAATGGATGAAGTTTC
                      ____________________________________________________________
consensus             ATTAGATTCTTCAATACTACTGGAAAGCTCTTCCATCAGTTCAGGAATGGATGAAGTTTC
 
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rJMSF020E02+          AGAAGAAGCTGTTTGTTTTAACCAGCTTCAAAATGTCATGGAACAGCTTGATCTGAAGAC
rJMSF010H21+          AGAAGAAGCTGTTTGTTTTAACCAGCTTCAAAATGTCATGGAACAGCTTGATCTGAAGAC
                      ____________________________________________________________
consensus             AGAAGAAGCTGTTTGTTTTAACCAGCTTCAAAATGTCATGGAACAGCTTGATCTGAAGAC
 
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rJMSF020E02+          AAAGCTATGCATAAGGGACAGTCTGTACCGGTTGGCTCGAAGTGCTGAACATAGGCATAG
rJMSF010H21+          AAAGCTATGCATAAGGGACAGTCTGTACCGGTTGGCTCGAAGTGCTGAACATAGGCATAG
                      ____________________________________________________________
consensus             AAAGCTATGCATAAGGGACAGTCTGTACCGGTTGGCTCGAAGTGCTGAACATAGGCATAG
 
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rJMSF020E02+          AAATGCTAACTTTAATGGTGGCAGTGGAGATAACAGAGATGCAAGTGGGGCATTGGTAGC
rJMSF010H21+          AAATGCTAACTTTAATGGTGGCAGTGGAGATAACAGAGATGCAAGTGGGGCATTGGTAGC
                      ____________________________________________________________
consensus             AAATGCTAACTTTAATGGTGGCAGTGGAGATAACAGAGATGCAAGTGGGGCATTGGTAGC
 
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rJMSF020E02+          TCATGGAACAGACAGGTGTACTGGATATATGGACATGGAAACGGACACGAACCCTATAGA
rJMSF010H21+          TCATGGAACAGACAGGTGTACTGGATATATGGACATGGAAACGGACACGAACCCTATAGA
                      ____________________________________________________________
consensus             TCATGGAACAGACAGGTGTACTGGATATATGGACATGGAAACGGACACGAACCCTATAGA
 
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rJMSF020E02+          TCGATCCATAGCGCACTTACTATTTCATCAGCCCTCAGACTCACCTGT------------
rJMSF010H21+          TCGATCCATAGCGCACTTACTATTTCATCAGCCCTCAGACTCACCTGTGGAGTCAATGAA
                      ____________________________________________________________
consensus             TCGATCCATAGCGCACTTACTATTTCATCAGCCCTCAGACTCACCTGTGGAGTCAATGAA
 
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rJMSF020E02+          --GATTCAGGGGTCAATCACAAGCATGCCTGTGATTGCTACTGAGAAGGTTGGTCATGGA
rJMSF005P11+            GATTCAGGGGTCAATCACAAGCATGCCTGTGATTGCTACTGAGAAGGTTGGTCATGGA
rJMSF010H21+          CAGATTCAGGGGTCAATCACAAGCATGCCTGTGATTGCTACTGAGAAGGTTGGTCATGGA
                      ____________________________________________________________
consensus             CAGATTCAGGGGTCAATCACAAGCATGCCTGTGATTGCTACTGAGAAGGTTGGTCATGGA
 
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rJMSF020E02+          GATGCTGCTGTTGAAGAAGATAAGAAGGCTGGCTACGAGTGACAGGTACATAGTTAAGAA
rJMSF005P11+          GATGCTGCNGTTGAAGAAGATAAGAAGGCTGGCTACGAGTGACAGGTACATAGTTAAGAA
rJMSF010H21+          GATGCTGCTGTTGAAGAAGATAAGAAGGCTGGCTACGAGTGACAGGTACATAGTTAAGAA
                      ____________________________________________________________
consensus             GATGCTGCTGTTGAAGAAGATAAGAAGGCTGGCTACGAGTGACAGGTACATAGTTAAGAA
 
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rJMSF020E02+          AGCTCAACCGAAGACAACAATGCTTACATTTTACTACTTTAAATGGCCGACAGATACATA
rJMSF005P11+          AGCTCAACCGAAGACAACAATGCTTACATTTTACTACTTTAAATGGCCGACAGATACATA
rJMSF010H21+          AGCTCAACCGAAGACAACAATGCTTACATTTTACTACTTTAAATGGCCGACAGATACATA
                      ____________________________________________________________
consensus             AGCTCAACCGAAGACAACAATGCTTACATTTTACTACTTTAAATGGCCGACAGATACATA
 
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rJMSF020E02+          TTTAAGAAAGCAAGATGTCTGTATTTGACTACTTTGGTTGGTCATGAATAGAATTACTTA
rJMSF005P11+          TTTAAGAAAGCAAGATGTCTGTATTTGACTACTTTGGTTGGTCATGAATAGAATTACTTN
rJMSF010H21+          TTTAAGAAAGCAAGATGTCTGTATTTGACTACTTTGGTTGGTCATGAATAGAATTACTTA
                      ____________________________________________________________
consensus             TTTAAGAAAGCAAGATGTCTGTATTTGACTACTTTGGTTGGTCATGAATAGAATTACTTA
 
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rJMSF020E02+          CTGCTGGGGAATCCTGTAAAAACCCTCAGTGACTAGGCTTTGTTCTTGGATGTGTTTCTC
rJMSF005P11+          CTGCTGGGGAATCCTGTAAAAACCCTCAGTGACTAGGCTTNGTTCTTGGATGTGTTTCTC
rJMSF010H21+          CTGCTGGGGAATCCTGTAAAAACCCTCAGTGACTAGGCTTTGTTCTTGGATGTGTTTCTC
                      ____________________________________________________________
consensus             CTGCTGGGGAATCCTGTAAAAACCCTCAGTGACTAGGCTTTGTTCTTGGATGTGTTTCTC
 
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rJMSF020E02+          ACAGCTTTGGCTTTTTATGTATAATCTTGTTTATGAGTTTATGT                
rJMSF005P11+          ACANCTTTGNCTTTTTACNNATAATCNTGTTTATGAGTTTATGT                
rJMSF010H21+          ACAGCTTTGGCTTTTTATGTATAATCTTGTTTATGAGTTTATGTTGTAGCCCCAGAGTTT
                      ____________________________________________________________
consensus             ACAGCTTTGGCTTTTTATGTATAATCTTGTTTATGAGTTTATGTTGTAGCCCCAGAGTTT