Contig 008456:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN013H21Sequence627008456 (8)gb|EYU34946.1|1e-63hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
JMFN038L10Sequence564008456 (8)gb|EYU34946.1|9e-67hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
JMFN039B24Sequence627008456 (8)gb|EYU34946.1|4e-65hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
JMFN044D20Sequence643008456 (8)gb|EYU34946.1|1e-64hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
JMSF009P04Sequence242008456 (8)613008456 (8)gb|EYU34946.1|1e-64hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
JMSF031J21Sequence670008456 (8)gb|EYU34946.1|2e-64hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]666008456 (8)gb|EYU34946.1|2e-64hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFN038L10+                                      ACAATTGGAATTAAGAAAAAGTAGCAATCAAAC
JMFN039B24+                                                                ATCAAAC
JMFN044D20+                                                                 TCAAAC
rJMSF031J21-                                                               ATCAAAC
JMSF031J21+                                                                ATCAAAC
                      ____________________________________________________________
consensus                                        ACAATTGGAATTAAGAAAAAGTAGCAATCAAAC
 
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JMFN038L10+           ATGCAATTCCGGACAAAACACATCACTTCACAAGCACAAAGTTGTTAATATCTCCATCAC
JMFN039B24+           ATGCAATTCCGGACAAAACACATCACTTCACAAGCACAAAGTTGTTAATATCTCCATCAC
JMFN044D20+           ATGCAATTCCGGACAAAACACATCACTTCACAAGCACAAAGTTGTTAATATCTCCATCAC
JMFN013H21+                 TTCCGGACAAAACACATCACTTCACAAGCACAAAGTTGTTAATATCTCCATCAC
rJMSF031J21-          ATGCAATTCCGGACAAAACACATCACTTCACAAGCACAAAGTTGTTAATATCTCCATCAC
JMSF031J21+           ANGCAATTCCGGACAAAACACATCANTTCACAAGCACAAAGTTGTTAATATNTCCATCAC
rJMSF009P04-                                                         ATATCTCCATCAC
                      ____________________________________________________________
consensus             ATGCAATTCCGGACAAAACACATCACTTCACAAGCACAAAGTTGTTAATATCTCCATCAC
 
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JMFN038L10+           AACAATATTTAGTAGGAGGTATAGTTCCCCCTACTAGTTCCCCAAACCACGCAATACATA
JMFN039B24+           AACAATATTTAGTAGGAGGTATAGTTCCCCCTACTAGTTCCCCAAACCACGCAATACATA
JMFN044D20+           AACAATATNTAGTAGGAGGTATAGTTCCCCCTACTAGTTCCCCAAACCACGCAATACATA
JMFN013H21+           AACAATATTTAGTAGGAGGTATAGTTCCCCCTACTAGTTCCCCAAACCACGCAATACATA
rJMSF031J21-          AACAATATTTAGTAGGAGGTATAGTTCCCCCTACTAGTTCCCCAAACCACGCAATACATA
JMSF031J21+           AACAATATTTAGTAGGAGGTATAGTTCCCCNTANTAGTTCCCCAAACCACGCAATACATA
rJMSF009P04-          AACAATATTTAGTAGGAGGTATAGTTCCCCCTACTAGTTCCCCAAACCACGCAATACATA
                      ____________________________________________________________
consensus             AACAATATTTAGTAGGAGGTATAGTTCCCCCTACTAGTTCCCCAAACCACGCAATACATA
 
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JMFN038L10+           ACATCCTATTAGAGCGACTACAACAGTTCAGCAAGTATTGCTTACGCCCCACCTACTTGT
JMFN039B24+           ACATCCTATTAGAGCGACTACAACAGTTCAGCAAGTATTGCTTACGCCCCACCTACTTGT
JMFN044D20+           ACATCCTATTAGAGCGACTACAACAGTTCAGCAAGTATTGCTTACGCCCCACCTACTTGT
JMFN013H21+           ACATCCTATTAGAGCGACTACAACAGTTCAGCAAGTATTGCTTACGCCCCACCTACTTGT
rJMSF031J21-          ACATCCTATTAGAGCGACTACAACAGTTCAGCAAGTATTGCTTACGCCCCACCTACTTGT
JMSF031J21+           ACATCCTATTAGAGCGACTACAACAGTTCAGCAAGTATTGCTTACGCCCCACCTACTTGT
rJMSF009P04-          ACATCCTATTAGAGCGACTACAACAGTTCAGCAAGTATTGCTTACGCCCCACCTACTTGT
                      ____________________________________________________________
consensus             ACATCCTATTAGAGCGACTACAACAGTTCAGCAAGTATTGCTTACGCCCCACCTACTTGT
 
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JMFN038L10+           CGTTTCCACGAGTCTTCAACTATCAGTTCGTCAACCCCCCAATCTTCATAACTTCCATCA
JMFN039B24+           CGTTTCCACGAGTCTTCAACTATCAGTTCGTCAACCCCCCAATCTTCATAACTTCCATCA
JMFN044D20+           CGTTTCCACGAGTCTTCAACTATCAGTTCGTCAACCCCCCAATCTTCATAACTTCCATCA
JMFN013H21+           CGTTTCCACGAGTCTTCAACTATCAGTTCGTCAACCCCCCAATCTTCATAACTTCCATCA
rJMSF031J21-          CGTTTCCACGAGTCTTCAACTATCAGTTCGTCAACCCCCCAATCTTCATAACTTCCATCA
JMSF031J21+           CGTTTCCACGAGTCTTCAACTATCAGTTCGTCAACCCCCCAATCTTCATAACTTCCATCA
rJMSF009P04-          CGTTTCCACGAGTCTTCAACTATCAGTTCGTCAACCCCCCAATCTTCATAACTTCCATCA
                      ____________________________________________________________
consensus             CGTTTCCACGAGTCTTCAACTATCAGTTCGTCAACCCCCCAATCTTCATAACTTCCATCA
 
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JMFN038L10+           GGCAAGTAACGGCGAATTGTGAAGGGAATCTTCCTCTCTCGAAGCTCTTTCATAGCAATC
JMFN039B24+           GGCAAGTAACGGCGAATTGTGAAGGGAATCTTCCTCTCTCGAAGCTCTTTCATAGCAATC
JMFN044D20+           GGCAAGTAACGGCGAATTGTGAAGGGAATCTTCCTCTCTCGAAGCTCTTTCATAGCAATC
JMFN013H21+           GGCAAGTAACGGCGAATTGTGATGGGAATCTTCCTCTCTCGAAGCTCTTTCATAGCAATC
rJMSF031J21-          GGCAAGTAACGGCGAATTGTGAAGGGAATCTTCCTCTCTCGAAGCTCTTTCATAGCAATC
JMSF031J21+           GGCAAGTAACGGCGAATTGTGAAGGGAATCTTCCTCTCTCGAAGCTCTTTCATAGCAATC
rJMSF009P04-          GGCAAGTAACGGCGAATTGTGAAGGGAATCTTCCTCTCTCGAAGCTCTTTCATAGCAATC
                      ____________________________________________________________
consensus             GGCAAGTAACGGCGAATTGTGAAGGGAATCTTCCTCTCTCGAAGCTCTTTCATAGCAATC
 
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JMFN038L10+           TCAAGGGGATCACTTTCGCCCTCCAACTCAACCATCACAGGAGCATTCATGCTGATCTGA
JMFN039B24+           TCAAGGGGATCACTTTCGCCCTCCAACTCAACCATCACAGGAGCATTCATGCTGATCTGA
JMFN044D20+           TCAAGGGGATCACTTTCGCCCTCCAACTCAACCATCACAGGAGCATTCATGCTGATCTGA
JMFN013H21+           TCAAGGGGATCACTTTCGCCCTCCAACTCAACCATCACAGGAGCATTCATGCTGATCTGA
rJMSF031J21-          TCAAGGGGATCACTTTCGCCCTCCAACTCAACCATCACAGGAGCATTCATGCTGATCTGA
JMSF031J21+           TCAAGGGGATCACTTTCGCCCTCCAACTCAACCATCACAGGAGCATTCATGCTGATCTGA
rJMSF009P04-          TCAAGGGGATCACTTTCGCCCTCCAACTCAACCATCACAGGAGCATTCATGCTGATCTGA
                      ____________________________________________________________
consensus             TCAAGGGGATCACTTTCGCCCTCCAACTCAACCATCACAGGAGCATTCATGCTGATCTGA
 
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JMFN038L10+           AGTGCACGGGTACCCAGAATTCTTGCTCTCTCATATTTTGTCATATATTTTGATGTTTTC
JMFN039B24+           AGTGCACGGGTACCCAGAATTCTTGCTCTCTCATATTTTGTCATATATTTTGATGTTTTC
JMFN044D20+           AGTGCACGGGTACCCAGAATTCTTGCTCTCTCATATTTTGTCATATATTTTGATGTTTTC
JMFN013H21+           AGTGCACGGGTACCCAGAATTCTTGCTCTCTCATATTTTGTCATATATTTTGATGTTTTC
rJMSF031J21-          AGTGCACGGGTACCCAGAATTCTTGCTCTCTCATATTTTGTCATATATTTTGATGTTTTC
JMSF031J21+           AGTGCACGGGTACCCAGAATTCTTGCTCTCTCATATTTTGTCATATATTTTGATGTTTTC
JMSF009P04+                                                                     TC
rJMSF009P04-          AGTGCACGGGTACCCAGAATTCTTGCTCTCTCATATTTTGTCATATATTTTGATGTTTTC
                      ____________________________________________________________
consensus             AGTGCACGGGTACCCAGAATTCTTGCTCTCTCATATTTTGTCATATATTTTGATGTTTTC
 
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JMFN038L10+           CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
JMFN039B24+           CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
JMFN044D20+           CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
JMFN013H21+           CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
rJMSF031J21-          CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
JMSF031J21+           CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
JMSF009P04+           CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
rJMSF009P04-          CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
                      ____________________________________________________________
consensus             CGAGGCCGTTCCACTGCATCCTGCTCATTTTTATCATCACCGTCACCCATTAGGGCGTCA
 
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JMFN038L10+           GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTC                 
JMFN039B24+           GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTCCTTCTTCAATCTCAGGC
JMFN044D20+           GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTCCTTCTTCAATCTCAGGC
JMFN013H21+           GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTCCTTCTTCAATCTCAGGC
rJMSF031J21-          GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTCCTTCTTCAATCTCAGGC
JMSF031J21+           GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTCCTTCTTCAATCTCAGGC
JMSF009P04+           GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTCCTTCTTCAATCTCAGGC
rJMSF009P04-          GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTCCTTCTTCAATCTCAGGC
                      ____________________________________________________________
consensus             GGTACATCTTCTGGCTGAGCATTATCCTCCTCTGGCTCAACTCCTTCTTCAATCTCAGGC
 
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JMFN039B24+           TCTACTGGCTCCTCCTCATATCCTCCGTCCATCTCATAGTCTTCGTCCGCCATTTTTGAG
JMFN044D20+           TCTACTGGCTCCTCCTCATATCCTCCGTCCATCTCATAGTCTTCGTCCGCCATTTTTGAG
JMFN013H21+           TCTACTGGCTCCTCCTCATATCCTCCGTCCATCTCATAGTCTTCGTCCGCCATTTTTGAG
rJMSF031J21-          TCTACTGGCTCCTCCTCATATCCTCCGTCCATCTCATAGTCTTCGTCCGCCATTTTTGAG
JMSF031J21+           TCTACTGGCTCCTCCTCATATCCTCCGTCCATCTCATAGTCTTCGTCCGCCATTTTTGAG
JMSF009P04+           TCTACTGGCTCCTCCTCATATCCTCCGTCCATCTCATAGTCTTCGTCCGCCATTTTTGAG
rJMSF009P04-          TCTACTGGCTCCTCCTCATATCCTCCGTCCATCTCATAGTCTTCGTCCGCCATTTTTGAG
                      ____________________________________________________________
consensus             TCTACTGGCTCCTCCTCATATCCTCCGTCCATCTCATAGTCTTCGTCCGCCATTTTTGAG
 
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JMFN039B24+           GTGCTTCTCAGTTC                                              
JMFN044D20+           GTGCTTCTCAGTTCTCCCTACCAGCAAAGCTCCGAAA                       
JMFN013H21+           GTGCTTCTCAGTTCTCCCTACCAGCAAAGCTCC                           
rJMSF031J21-          GTGCTTCTCAGTTCTCCCTACNAGCAAAGCTCCGAAACTCTTCTTCAGCTAANGCTCAC 
JMSF031J21+           GTGCTTCTCAGTTCTCCCTACCAGCAAAGCTCCGAAACTCTTCTTCAGCTAATGCTCAC 
JMSF009P04+           GTGCTTCTCAGTTCTCCCTACCAGCAAAGCTCCGAAACTCTTCTTCAGCTAATGCTCAC 
rJMSF009P04-          GTGCTTCTCAGTTCTCCCTACCAGCAAAGCTCCGAAACTCTTCTTCAGCTAATGCTCACC
                      ____________________________________________________________
consensus             GTGCTTCTCAGTTCTCCCTACCAGCAAAGCTCCGAAACTCTTCTTCAGCTAATGCTCACC