Contig 008453:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS029F12Sequence636008453 (2)
JMSF009G01Sequence382009106 (3)ref|XP_009604550.1|179PREDICTED: uncharacterized protein LOC104099302 [Nicotiana tomentosiformis] ref|722008453 (2)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-                                                          GATGCTGATATGA
                      ____________________________________________________________
consensus                                                            GATGCTGATATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           TTGAGTTGTTGTGCCCATTTTTTATGGAAGAGAATGGCTTGCTACCAATTGAGAGTAACA
rJMSF009G01+                                                                    CA
                      ____________________________________________________________
consensus             TTGAGTTGTTGTGCCCATTTTTTATGGAAGAGAATGGCTTGCTACCAATTGAGAGTAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           ATAATAAGAATATGAGTGATCTTAACCAAGCAAGATCTGTAGAGATAGCAGCATGTAATG
rJMSF009G01+          ATAATAAGAATATGAGTGATCTTAACCAAGCAAGATCTGTAGAGATAGCAGCATGTAATG
                      ____________________________________________________________
consensus             ATAATAAGAATATGAGTGATCTTAACCAAGCAAGATCTGTAGAGATAGCAGCATGTAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           ATGGAGATGATATCTATAATGGCCTAGGAGGTTTGGATAACTTGCCAACGCTTGATGAAG
rJMSF009G01+          ATGGAGATGATATCTATAATGGCCTAGGAGGTTTGGATAACTTGCCAACGCTTGATGAAG
                      ____________________________________________________________
consensus             ATGGAGATGATATCTATAATGGCCTAGGAGGTTTGGATAACTTGCCAACGCTTGATGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           ACGGATTTTGTAATACCCGAAATCCATGGGAAGAGACTACTGCATACTATGGTGACAGTG
rJMSF009G01+          ACGGATTTTGTAATACCCGAAATCCATGGGAAGAGACTACTGCATACTATGGTGACAGTG
                      ____________________________________________________________
consensus             ACGGATTTTGTAATACCCGAAATCCATGGGAAGAGACTACTGCATACTATGGTGACAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           ATGCATATATTAACCAAGCAAGAAGTGTAGAAGTATCAGAGTGTAATGATGGAGATGATA
rJMSF009G01+          ATGCATATATTAACCAAGCAAGAAGTGTAGAAGTATCAGAGTGTAATGATGGAGATGATA
                      ____________________________________________________________
consensus             ATGCATATATTAACCAAGCAAGAAGTGTAGAAGTATCAGAGTGTAATGATGGAGATGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           TGTTCAACATCTTAGGATACCTGGGTAACTTGCCAACAACTGGTGAAGACGGATTTCCTA
rJMSF009G01+          TGTTCAACATCTTAGGATACCTGGGTAACTTGCCAACAACTGGTGAAGACGGATTTCCTA
                      ____________________________________________________________
consensus             TGTTCAACATCTTAGGATACCTGGGTAACTTGCCAACAACTGGTGAAGACGGATTTCCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           ATATGACTATGGCTGCTGCTGCTGGATATGTGGAGCTTGATGATCTTTTGAAGCCATTAG
rJMSF009G01+          ATATGACTATGGCTGCTGCTGCTGGATATGTGGAGCTTGATGATCTTTTGAAGCCATTAG
                      ____________________________________________________________
consensus             ATATGACTATGGCTGCTGCTGCTGGATATGTGGAGCTTGATGATCTTTTGAAGCCATTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           ATGAATCAAATTGTGGTAGTGAAACTCAGCACTTGTATCCATTTTACAATAATGTGGAAC
rJMSF009G01+          ATGAATCAAATGGTGGTAGTGAAACTCAGCACTTGTATCCATTTTACAATAATGTGGAAC
                      ____________________________________________________________
consensus             ATGAATCAAATTGTGGTAGTGAAACTCAGCACTTGTATCCATTTTACAATAATGTGGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           AGTCCCATATTAGAGGCAATACTACTAGTGGCAGTAATCCAGTGGCAGCCGAGGAAAACA
rJMSF009G01+          AGTCCCATATTAGAGGCAATACTACTAGTGGCAGTAATCCAGTGGCAGCCGAGGAAAACA
                      ____________________________________________________________
consensus             AGTCCCATATTAGAGGCAATACTACTAGTGGCAGTAATCCAGTGGCAGCCGAGGAAAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           TCCATCCAAAACCAAAAGGATACAATTCATGGTGAATGCTGACAGTTGNGAGTGATGGAG
rJMSF009G01+          TCCATCCAAAACCAAAAGGATACAATTCATGGTGAATGCTGACAGTTGGGAGTGATGGAG
                      ____________________________________________________________
consensus             TCCATCCAAAACCAAAAGGATACAATTCATGGTGAATGCTGACAGTTGGGAGTGATGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029F12-           CAGGCAGATTGATGGTTGATAAC                                     
rJMSF009G01+          CAGGCAGATTGATGGTTGATAACCAATTAAGTTACATTGATGAAGAGCAACGTTGTGATT
                      ____________________________________________________________
consensus             CAGGCAGATTGATGGTTGATAACCAATTAAGTTACATTGATGAAGAGCAACGTTGTGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009G01+          TTTGTTTATAGATTGCTGGCTGGCTGGCTGGCTTTGTGTTTTAAGTTTGAACCATATTCC
                      ____________________________________________________________
consensus             TTTGTTTATAGATTGCTGGCTGGCTGGCTGGCTTTGTGTTTTAAGTTTGAACCATATTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009G01+          ATTTTCTTTCACTTCAGACTTGAATTGGTGTATGTACATAATTTGTATCTTCTTGTCATG
                      ____________________________________________________________
consensus             ATTTTCTTTCACTTCAGACTTGAATTGGTGTATGTACATAATTTGTATCTTCTTGTCATG