Contig 008445:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J12Sequence416008445 (2)ref|XP_009607286.1|283PREDICTED: uncharacterized protein LOC104101522 [Nicotiana tomentosiformis]673019057emb|CDP13869.1|1e-46unnamed protein product [Coffea canephora]
JMSF008C20Sequence368007753 (2)757008445 (2)emb|CDP13869.1|8e-112unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005J12-                                  AAGAGATTAAAATCAGTCCAGGAATTATGCTGTTGAT
                      ____________________________________________________________
consensus                                    AAGAGATTAAAATCAGTCCAGGAATTATGCTGTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005J12-           ATTTACCAAAGCTAGTGCCTATGTTCCCCTAAAGATTCTTTCTATTGAGGATGGGACTGT
                      ____________________________________________________________
consensus             ATTTACCAAAGCTAGTGCCTATGTTCCCCTAAAGATTCTTTCTATTGAGGATGGGACTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005J12-           TCTCAAATCGTTCAACCATCTGCTTCATCGTAATAAGAAGGTCGACTTCATTGAACAGTT
                      ____________________________________________________________
consensus             TCTCAAATCGTTCAACCATCTGCTTCATCGTAATAAGAAGGTCGACTTCATTGAACAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005J12-           CAATGAAAAGCTACTTGTCAAGCAAGAAAACGAGAATCTTCAGATTCTTGACGTCCGCAA
rJMSF008C20+                                         GAGAATCTTCAGATTCTTGATGTCCGTAA
                      ____________________________________________________________
consensus             CAATGAAAAGCTACTTGTCAAGCAAGAAAACGAGAATCTTCAGATTCTTGATGTCCGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005J12-           TTCTGAACTGACGGAAGTCAGTAGGACCGAGTTCATGACACCATCGGCTTTCATATTTCT
rJMSF008C20+          CTCTGAATTAACAGAAGTTAGCAGAACCGAGTTCATGACCCCTTCAGCATTCATTTTTCT
                      ____________________________________________________________
consensus             TTCTGAATTGACGGAAGTTAGTAGGACCGAGTTCATGACCCCTTCGGCTTTCATTTTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005J12-           GTACGAGAACCAGCTATTCTTGACGTTCAGAAACAGAACAGTTGCCGTTTGGAACTTCCG
rJMSF008C20+          GTACGAGAACCAGCTGTTCTTGACATTCCGAAACAGAACAGTTGCTGTCTGGAACTTCCG
                      ____________________________________________________________
consensus             GTACGAGAACCAGCTGTTCTTGACGTTCCGAAACAGAACAGTTGCTGTTTGGAACTTCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005J12-           TGGGGAGCTCGTAACTTCATTTGAGGATCACCTTTTGTGGCATCCAGACTGCAATACTAA
rJMSF008C20+          AGGGGAGCTTGTAACTTCATTCGAGGATCATCTTTTGTGGCATCCTGATTGTAATACTAA
                      ____________________________________________________________
consensus             TGGGGAGCTTGTAACTTCATTTGAGGATCATCTTTTGTGGCATCCTGATTGTAATACTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF005J12-           CAACATTTACATTACTAGT                                         
rJMSF008C20+          CAACATTTACATAACTAGTGACCAGGACCTAATCATCTCCTACTGTAAAGCCGATTCTTA
                      ____________________________________________________________
consensus             CAACATTTACATTACTAGTGACCAGGACCTAATCATCTCCTACTGTAAAGCCGATTCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008C20+          TGAGTCTCTATCAGAAGGAACTGCTGGCTCTATCAATATCAGCAATATTTTGACAGGGAA
                      ____________________________________________________________
consensus             TGAGTCTCTATCAGAAGGAACTGCTGGCTCTATCAATATCAGCAATATTTTGACAGGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008C20+          GTGCCTTGCTAAAATAAAAGCAACCGACGCTGTTGCCACGAACGATTGCAATTGCACTGC
                      ____________________________________________________________
consensus             GTGCCTTGCTAAAATAAAAGCAACCGACGCTGTTGCCACGAACGATTGCAATTGCACTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008C20+          CCGCTGTGGTGGTAGGAGCTGCAAGTCGAAGCGTGTCCAAGCGTCTAGAATTAGGAGCAC
                      ____________________________________________________________
consensus             CCGCTGTGGTGGTAGGAGCTGCAAGTCGAAGCGTGTCCAAGCGTCTAGAATTAGGAGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008C20+          GGTTGCAGAGGCCCTGGACGATATCACCGCCCTCTTTTACGATGAGGAGCGCAACGAGAT
                      ____________________________________________________________
consensus             GGTTGCAGAGGCCCTGGACGATATCACCGCCCTCTTTTACGATGAGGAGCGCAACGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008C20+          CTATACTGGCAATAGGTGTGGACTGGTCCATGTGTGGTCTAACTGAAGGGCCTGTGTTCA
                      ____________________________________________________________
consensus             CTATACTGGCAATAGGTGTGGACTGGTCCATGTGTGGTCTAACTGAAGGGCCTGTGTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008C20+          AGGTGGAATGAACAACTCAAAACTGCAACCTCTGCAGTTGTACCATTAGGCACTGATGTT
                      ____________________________________________________________
consensus             AGGTGGAATGAACAACTCAAAACTGCAACCTCTGCAGTTGTACCATTAGGCACTGATGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008C20+          TCTGTTTACTTTGTAGCATTTTCTGGGCTCCCCACAATACTTAAGTGGGGAGGATGTTGC
                      ____________________________________________________________
consensus             TCTGTTTACTTTGTAGCATTTTCTGGGCTCCCCACAATACTTAAGTGGGGAGGATGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008C20+          ATCTGTCATCTATTAACATTGTGGTATATTTTTTGTTAATAATTTGACTTGTTGGGGGAT
                      ____________________________________________________________
consensus             ATCTGTCATCTATTAACATTGTGGTATATTTTTTGTTAATAATTTGACTTGTTGGGGGAT