Contig 008443:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017B09+            GGCTCAGATGATGCTCAGATTTGCCTGTGGGACATTAATGCTACTCCAAAGAATAAGG
                      ____________________________________________________________
consensus               GGCTCAGATGATGCTCAGATTTGCCTGTGGGACATTAATGCTACTCCAAAGAATAAGG
 
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rJMSF017B09+          CCCTTGATGCCATGCATATATATAAGATTCACGAGGGAGTTGTTGAGGATGTAGCATGGC
                      ____________________________________________________________
consensus             CCCTTGATGCCATGCATATATATAAGATTCACGAGGGAGTTGTTGAGGATGTAGCATGGC
 
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rJMSF017B09+          ATCTGAGGCATGAGTATTTGTTTGGTTCAGTTGGAGATGATCAATATCTACACGTATGGG
rJMSF008A18+                GGCATGAGTATTTGTTTGGTTCAGTTGGAGATGATCAATATCTACACGTATGGG
                      ____________________________________________________________
consensus             ATCTGAGGCATGAGTATTTGTTTGGTTCAGTTGGAGATGATCAATATCTACACGTATGGG
 
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rJMSF017B09+          ATATGCGGACTCCATCAGTCACCAAGCCTATGCAGTCTGTAGTTGCTCATAATGGAGAGG
rJMSF008A18+          ATATGCGGACTCCATCAGTCACCAAGCCTATGCAGTCTGTAGTTGCTCATAATGGAGAGG
                      ____________________________________________________________
consensus             ATATGCGGACTCCATCAGTCACCAAGCCTATGCAGTCTGTAGTTGCTCATAATGGAGAGG
 
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rJMSF017B09+          TCAACTGCTTAGCATTCAATCCTTTTAATGAGTGGGTTGTCGCAACGGGATCCACTGACA
rJMSF008A18+          TCAACTGCTTAGCATTCAATCCTTTTAATGAGTGGGTTGTCGCAACGGGATCCACTGACA
                      ____________________________________________________________
consensus             TCAACTGCTTAGCATTCAATCCTTTTAATGAGTGGGTTGTCGCAACGGGATCCACTGACA
 
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rJMSF017B09+          AGACAGTCAAATTATTTGATCTGCGCAAGATTACTTCTGCCCTCCATACCTTTGAATGTC
rJMSF008A18+          AGACAGTCAAATTATTTGATCTGCGCAAGATTACTTCTGCCCTCCATACCTTTGAATGTC
                      ____________________________________________________________
consensus             AGACAGTCAAATTATTTGATCTGCGCAAGATTACTTCTGCCCTCCATACCTTTGAATGTC
 
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rJMSF017B09+          ACAAGGAGGAGGTTTTCCAAGTTGGTTGGAATCCAAAGAATGAGACTATCTTAGCTTCTT
rJMSF008A18+          ACAAGGAGGAGGTTTTCCAAGTTGGTTGGAATCCAAAGAATGAGACTATCTTAGCTTCTT
                      ____________________________________________________________
consensus             ACAAGGAGGAGGTTTTCCAAGTTGGTTGGAATCCAAAGAATGAGACTATCTTAGCTTCTT
 
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rJMSF017B09+          GTTGCCTTGGTAGGAGACTCATGGTCTGGGACCTGAGCAGGATTGATGAAGAGCAAACAC
rJMSF008A18+          GTTGCCTTGGTAGGAGACTCATGGTCTGGGACCTGAGCAGGATTGATGAAGAGCAAACAC
                      ____________________________________________________________
consensus             GTTGCCTTGGTAGGAGACTCATGGTCTGGGACCTGAGCAGGATTGATGAAGAGCAAACAC
 
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rJMSF017B09+          CAGAGGATGCTGAAGATGGGCCGCCAGAATTGCTCTTTATTCATGGTGGGCATACCAGTA
rJMSF008A18+          CAGAGGATGCTGAAGATGGGCCGCCAGAATTGCTCTTTATTCATGGTGGGCATACCAGTA
                      ____________________________________________________________
consensus             CAGAGGATGCTGAAGATGGGCCGCCAGAATTGCTCTTTATTCATGGTGGGCATACCAGTA
 
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rJMSF017B09+          AAATTTCCGACTTCTCATGGAATCCATGTGAAGATTGGGTCATTGCCAGTGTAGCCGAAG
rJMSF008A18+          AAATTTCCGACTTCTCATGGAATCCATGTGAAGATTGGGTCATTGCCAGTGTAGCCGAAG
                      ____________________________________________________________
consensus             AAATTTCCGACTTCTCATGGAATCCATGTGAAGATTGGGTCATTGCCAGTGTAGCCGAAG
 
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rJMSF017B09+          ATAACATACTACAAATCTGGCAAATGGCCGAGAACATTTATCATGATGATGATGATATAA
rJMSF008A18+          ATAACATACTACAAATCTGGCAAATGGCCGAGAACATTTATCATGATGATGATGATATAA
                      ____________________________________________________________
consensus             ATAACATACTACAAATCTGGCAAATGGCCGAGAACATTTATCATGATGATGATGATATAA
 
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rJMSF017B09+          CTGGAGATGACGCTACAAAAGCTCCCTAGTCCAGGTTTCTACTCTCCAATGCAAATGTAA
rJMSF008A18+          CTGGAGATGACGCTACAAAAGCTCCCTAGTCCAGGTTTCTACTCTCCAATGCAAATGTAA
                      ____________________________________________________________
consensus             CTGGAGATGACGCTACAAAAGCTCCCTAGTCCAGGTTTCTACTCTCCAATGCAAATGTAA
 
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rJMSF017B09+          CCCCCCGGGATCTCATGCCTAGTTTCTGTTAGGAGGGTGTAGATGTTTTCTCTAGTTTAC
rJMSF008A18+          CCCCCCGGGATCTCATGCCTAGTTTCTGTTAGGAGGGTGTAGATGTTTTCTCTAGTTTAC
                      ____________________________________________________________
consensus             CCCCCCGGGATCTCATGCCTAGTTTCTGTTAGGAGGGTGTAGATGTTTTCTCTAGTTTAC
 
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rJMSF017B09+          ACTCACTGTTGAAATTGAAATAGACTCTGCTGCTATCAA                     
rJMSF008A18+          ACTCACTGTTGAAATTGAAATAGACTCTGCTGCTATCAATTATGGCATTTCCTAACCTGC
                      ____________________________________________________________
consensus             ACTCACTGTTGAAATTGAAATAGACTCTGCTGCTATCAATTATGGCATTTCCTAACCTGC
 
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rJMSF008A18+          ATGTTCTCTTAATCTGCATCCAGGAATTTTGTACTTTAGATAGCAAACTTAGCTTATCTG
                      ____________________________________________________________
consensus             ATGTTCTCTTAATCTGCATCCAGGAATTTTGTACTTTAGATAGCAAACTTAGCTTATCTG