| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007E13 | Sequence | 508 | 008442 (9) | gb|AAB88854.1| | 6e-40 | S-adenosylmethionine decarboxylase [Nicotiana tabacum] | 621 | 008442 (9) | gb|AIS20829.1| | 3e-38 | SAMDC3 [Pyrus x bretschneideri] |
| JMFF007E24 | Sequence | 565 | 011911 (7) | gb|KDO58886.1| | 3e-17 | hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis] | 744 | 008442 (9) | ref|XP_009765510.1| | 1e-80 | PREDICTED: S-adenosylmethionine decarboxylase proenzyme, partial [Nicotiana syl |
| JMFF012O02 | Sequence | 523 | 011911 (7) | gb|KDO58886.1| | 2e-17 | hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis] | 611 | 008442 (9) | ref|XP_009625495.1| | 9e-58 | PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor |
| JMFF029C09 | Sequence | 483 | 011911 (7) | gb|KDO58886.1| | 2e-17 | hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis] | 739 | 008442 (9) | ref|XP_009625495.1| | 7e-75 | PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor |
| JMFF037O16 | Sequence | 573 | 011911 (7) | ref|XP_010046605.1| | 50.1 | PREDICTED: uncharacterized protein LOC104435580, partial [Eucalyptus grandis] | 738 | 008442 (9) | ref|XP_009625495.1| | 7e-79 | PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor |
| JMFF039I06 | Sequence | 623 | 011911 (7) | gb|KDO58886.1| | 4e-17 | hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis] | 630 | 008442 (9) | ref|XP_009765510.1| | 7e-59 | PREDICTED: S-adenosylmethionine decarboxylase proenzyme, partial [Nicotiana syl |
| JMSF008A05 | Sequence | 264 | 011911 (7) | 766 | 008442 (9) | ref|XP_009625495.1| | 2e-84 | PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor | |||
| JMSF034H20 | Sequence | 690 | 018969 | pdb|1MHM|B | 5e-20 | Chain B, Crystal Structure Of S-Adenosylmethionine Decarboxylase From Potato | 726 | 008442 (9) | ref|XP_009625495.1| | 2e-80 | PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor |
This contig is upended
. : . : . : . : . : . :
rJMFF037O16+ TGCATGACGGGTT
rJMFF007E24+ TGCATGACGGGTT
rJMSF034H20+ TGCATGACGGGTT
rJMFF029C09+ CGGGTT
rJMSF008A05+ CCAGGAATGGACCCTGTTTACACGGTCGAAATGTGCATGACGGGTT
____________________________________________________________
consensus CCAGGAATGGACCCTGTTTACACGGTCGAAATGTGCATGACGGGTT
. : . : . : . : . : . :
rJMFF037O16+ TGGATCACGAGAAGGCTCGTGTGTTTTACAAGGACGAATCGAGTTCTGCTGCTGTCATGA
rJMFF007E24+ TGGATCACGAGAAGGCTCGTGTGTTTTACAAGGACGAATCGAGTTCTGCTGCTGTCATGA
rJMSF034H20+ TGGATCACGAGAAGGCTCGTGTGTTTTACAAGGACGAATCGAGTTCTGCTGCTGTCATGA
rJMFF029C09+ TGGATCACGAGAAGGCTCGTGTGTTTTACAAGGACGAATCGAGTTTTGCTGCTGTCATGA
rJMSF008A05+ TGGATCACGAGAAGGCTCGTGTGTTTTACAAGGACGAATCGAGTTCTGCTGCTGTCATGA
____________________________________________________________
consensus TGGATCACGAGAAGGCTCGTGTGTTTTACAAGGACGAATCGAGTTCTGCTGCTGTCATGA
. : . : . : . : . : . :
rJMFF037O16+ CGGTTAACTCCGGGATTAGGAAGATCCTCCCCGAGTCTGACATCTGCGATTATGACTTTG
rJMFF007E24+ CGGTTAACTCCGGGATTAGGAAGATCCTCCCCGAGTCTGACATCTGCGATTATGACTTTG
rJMSF034H20+ CGGTTAACTCCGGGATTAGGAAGATCCTCCCCGAGTCTGACATCTGCGATTATGACTTTG
rJMFF029C09+ CGGTTAACTCCGGGATTAGGAAGATCCTCCCCGAGTCTGACATCTGCGATTATGACTTTG
rJMFF012O02+ TCTGACATCTGCGATTATGACTTTG
JMFF007E13- ACTTTG
rJMFF007E13+ GACTTTG
rJMFF039I06+ ATTAGGAAGATCCTCCCCGAGTCTGACATCTGCGATTATGACTTTG
rJMSF008A05+ CGGTTAACTCCGGGATTAGGAAGATCCTCCCCGAGTCTGACATCTGCGATTATGACTTTG
____________________________________________________________
consensus CGGTTAACTCCGGGATTAGGAAGATCCTCCCCGAGTCTGACATCTGCGATTATGACTTTG
. : . : . : . : . : . :
rJMFF037O16+ AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
rJMFF007E24+ AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
rJMSF034H20+ AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
rJMFF029C09+ AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
rJMFF012O02+ AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
JMFF007E13- AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
rJMFF007E13+ AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
rJMFF039I06+ AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
rJMSF008A05+ AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
____________________________________________________________
consensus AACCGTGTGGGTACTCCATGAATTCTATCGAAGGAGGTGCGCTCTCGACCATTCACGTGA
. : . : . : . : . : . :
rJMFF037O16+ CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
rJMFF007E24+ CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
rJMSF034H20+ CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
rJMFF029C09+ CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
rJMFF012O02+ CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
JMFF007E13- CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
rJMFF007E13+ CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
rJMFF039I06+ CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTNGGATATGATCTTGAAGCGG
rJMSF008A05+ CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
____________________________________________________________
consensus CACCGGAAGACGGGTTTAGTTACGCGAGCTTTGAAGCCGTTGGATATGATCTTGAAGCGG
. : . : . : . : . : . :
rJMFF037O16+ TGAAACTATCGGCCCTGATTGAGAGGGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
rJMFF007E24+ TGAAACTATCGGCCCTGATTGAGAGGGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
rJMSF034H20+ TGAAACTATCGGCCCTGATTGAGAGGGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
rJMFF029C09+ TGAAACTATCGGCCCTGATTGAGAGGGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
rJMFF012O02+ TGAAACTATCGGCCCTGATTGAGAGGGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
JMFF007E13- TGAAACTATCGGCCCTGATTGAGA-GGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
rJMFF007E13+ TGAAACTATCGGCCCTGATTGAGA-GGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
rJMFF039I06+ TGAAANTATCGGCCCTGATTGAGAGGGCNTTGGGGTGTTTTGAACCGAGCGAGTTNTCTG
rJMSF008A05+ TGAAACTATCGGCCCTGATTGAGAGGGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
____________________________________________________________
consensus TGAAACTATCGGCCCTGATTGAGAGGGCGTTGGGGTGTTTTGAACCGAGCGAGTTTTCTG
. : . : . : . : . : . :
rJMFF037O16+ TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
rJMFF007E24+ TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
rJMSF034H20+ TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
rJMFF029C09+ TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
rJMFF012O02+ TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
JMFF007E13- TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
rJMFF007E13+ TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
rJMFF039I06+ TTGCGGTTCATGNTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTNTNGACGTTA
rJMSF008A05+ TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
____________________________________________________________
consensus TTGCGGTTCATGCTGATGTTGCTGGTAAGCTGCTCGACCAGAATTGCTGTCTCGACGTTA
. : . : . : . : . : . :
rJMFF037O16+ AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
rJMFF007E24+ AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
rJMSF034H20+ AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
rJMFF029C09+ AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
rJMFF012O02+ AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
JMFF007E13- AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
rJMFF007E13+ AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
rJMFF039I06+ AAGGGTATTGTCTNGATGAGAGAAGCCCCGAGGAGTTTGGANCTGGCTGTGGTTCCNTTN
rJMSF008A05+ AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
____________________________________________________________
consensus AAGGGTATTGTCTCGATGAGAGAAGCACCGAGGAGTTTGGAACTGGCTGTGGTTCCGTTA
. : . : . : . : . : . :
rJMFF037O16+ TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
rJMFF007E24+ TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
rJMSF034H20+ TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
rJMFF029C09+ TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
rJMFF012O02+ TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
JMFF007E13- TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
rJMFF007E13+ TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
rJMFF039I06+ TTTACCAGAAGTTTGTTAGGGATGNTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
rJMSF008A05+ TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
____________________________________________________________
consensus TTTACCAGAAGTTTGTTAGGGATGCTTATGCTTGTGGCTCACCAAAGTCTGTTCTTCAAA
. : . : . : . : . : . :
rJMFF037O16+ GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
rJMFF007E24+ GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
rJMSF034H20+ GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
rJMFF029C09+ GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
rJMFF012O02+ GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
JMFF007E13- GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
rJMFF007E13+ GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
rJMFF039I06+ GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
rJMSF008A05+ GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
____________________________________________________________
consensus GCTCCTGGAAACAGGAGGATAAAGAAGAGAAGTAGTAGTGTTGAGGGTTGTTTTTTTGTT
. : . : . : . : . : . :
rJMFF037O16+ TTTTTTTCCTTTTTTGTTTTTATGTTTCGTAAAAATTCGTGTTTGTTCGTCGCTGTTGCA
rJMFF007E24+ TTTTTTTCCTTTTTTGTTTTTATGTTTCGTAAAAATTCGTGTTTGTTCGTCGCTGTTGCA
rJMSF034H20+ TTTTTTTCCTTTTTTGTTTTTATGTTTCGTAAAAATTCGTGTTTGTTCGTCGCTGTTGCA
rJMFF029C09+ TTTTTTTCCCTTTTTGTTTTTATGTTTCGTAAAAATTCGTGTTTGTTCGTCGCTGTTGCA
rJMFF012O02+ TTTTTTTCCTTTTTTGTTTTTATGTTTCGTAAAAATTCGTGTTTGTTCGTCGCTGTTGCA
JMFF007E13- TTTTTTTCCTTTTTTGTTTTTATGTTTCNTAAAAATTCNTGTTTGTTCNTCNCTGTTGCA
rJMFF007E13+ TTTTTTTCCTTTTTTGTTTTTATGTTTCGTAAAAATTCGTGTTTGTTCGTCGCTGTTGCA
rJMFF039I06+ TTTTNTTCCTTTTTAGTTTTTANGTTTCGTAAAAATTCGTNTTTGTTCGTCGCTGTTGCA
rJMSF008A05+ TTTTTTTCCTTTTTTGTTTTTATGTTTCGTAAAAATTCGTGTTTGTTCGTCGCTGTTGCA
____________________________________________________________
consensus TTTTTTTCCTTTTTTGTTTTTATGTTTCGTAAAAATTCGTGTTTGTTCGTCGCTGTTGCA
. : . : . : . : . : . :
rJMFF037O16+ TTAATGTTCTTGTGTTTCCGCTGAATAATGTTTGTTGTGTGCAGTCCAATTAGTTGGGTT
rJMFF007E24+ TTAATGTTCTTGTGTTTCCGCTGAATAATGTTTGTTGTGTGCAGTCCAATTAGTTGGGTT
rJMSF034H20+ TTAATGTTCTTGTGTTTCCGCTGAATAATGTTTGTTGTGTGCAGTCCAATTAGTTGGGTT
rJMFF029C09+ TTAATGTTCTTGTGTTTCCGCTGAATAATGTTTGTTGTGTGCAGTCCAATTAGTTGGGTT
rJMFF012O02+ TTAATGTTCTTGTGTTTCCGCTGAATAATGTTTGTTGTGTGCAGTCCAATTAGTTGGGTT
JMFF007E13- TTAATGTTCTTGTGTTTCC
rJMFF007E13+ TTAATGTTCTTGTGTTTCCGCTGAATAATGTTTGTTGTGTGCAGTCCAATTAGTTGGGTT
rJMFF039I06+ TTAATGTTCTTGTGTTTCCGCTGAATAATGTTNGTTGTGTGCAGTCCAATTAGTTGGGTT
rJMSF008A05+ TTAATGTTCTTGTGTTTCCGCTGAATAATGTTTGTTGTGTGCAGTCCAATTAGTTGGGTT
____________________________________________________________
consensus TTAATGTTCTTGTGTTTCCGCTGAATAATGTTTGTTGTGTGCAGTCCAATTAGTTGGGTT
. : . : . : . : . : . :
rJMFF037O16+ GTGGACAATGAAACAATTTGTGTTTTGTTGTACTGTTTGAGCTTTCTTATGGAGGCT
rJMFF007E24+ GTGGACAATGAAACAATTTGTGTTTTGTTGTACTGTTTGAGCTTTCTTATGGAGGCT
rJMSF034H20+ GTGGACAATGAAACAATTTGTGTTTTGTTGTACTGTTTGAGCTT
rJMFF029C09+ GTGGACAATGAAACAATTTGTGTTTTGTTGTACTGTTTGAGCTTTCTTATGGAGGCT
rJMFF012O02+ GTGGACAATGAAACAATTTGTGTTTTGTTGTACTGTTTGAGCTTTC
rJMFF007E13+ GTGGACAATGAAACAATTTGTGTTTTGTTGTACTGTTTGAGCTTTCTTATGGAGGCT
rJMFF039I06+ GTGGACAANGAAACAATTTGTGTTTTGTNGTAC
rJMSF008A05+ GTGGACAATGAAACAATTTGTGTTTTGTTGTACTGTTTGAGCTTTCTTANGGAGGCTGAA
____________________________________________________________
consensus GTGGACAATGAAACAATTTGTGTTTTGTTGTACTGTTTGAGCTTTCTTATGGAGGCTGAA