Contig 008437:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+                                    CCGCGCTACGTAGTTCTCTCCCTCCCCATTTGCG
rJMSF007K07+                         TACAGAGATTTCCGCGCTACGTAGTTCTCTCCCTCCCCATTTGCG
                      ____________________________________________________________
consensus                            TACAGAGATTTCCGCGCTACGTAGTTCTCTCCCTCCCCATTTGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          CAAATGCTCGACAGTTGAGATTCTAACAGCCCTCATGTGGCGGTGCCGCACCATTGCCCT
rJMSF007K07+          CAAATGCTCGACAGTTGAGATTCTAACAGCCCTCATGTGGCGGTGCCGCACCATTGCCCT
                      ____________________________________________________________
consensus             CAAATGCTCGACAGTTGAGATTCTAACAGCCCTCATGTGGCGGTGCCGCACCATTGCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          TGGATTCCACCCGGACGAGGAAGTGCGCATGCTTTTACTCATCAATGCACGTTTTAGGTT
rJMSF007K07+          TGGATTCCACCCGGACGAGGAAGTGCGCATGCTTTTACTCATCAATGCACGTTTTAGGTT
                      ____________________________________________________________
consensus             TGGATTCCACCCGGACGAGGAAGTGCGCATGCTTTTACTCATCAATGCACGTTTTAGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          CAAAGATTCCCCGGTGCCAAGTGGGTACACCGGCAATGCGTTTGCTTATCCCGGCGCCAA
rJMSF007K07+          CAAAGATTCCCCGGTGCCAAGTGGGTACACCGGCAATGCGTTTGCTTATCCCGGCGCCAA
                      ____________________________________________________________
consensus             CAAAGATTCCCCGGTGCCAAGTGGGTACACCGGCAATGCGTTTGCTTATCCCGGCGCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          AACGACAGCCGGAAAATTGAGGAAAAACCCATTGGGTTACGCGGTTGAGTTGGTCACAAG
rJMSF007K07+          AACGACAGCCGGAAAATTGAGGAAAAACCCATTGGGTTACGCGGTTGAGTTGGTCACAAG
                      ____________________________________________________________
consensus             AACGACAGCCGGAAAATTGAGGAAAAACCCATTGGGTTACGCGGTTGAGTTGGTCACAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          CATCAAACGTTGCTTTAGCGAAGAGTACATGCAATCCGTGATGGACTTGATGGTTCTTAA
rJMSF007K07+          CATCAAACGTTGCTTTAGCGAAGAGTACATGCAATCCGTGATGGACTTGATGGTTCTTAA
                      ____________________________________________________________
consensus             CATCAAACGTTGCTTTAGCGAAGAGTACATGCAATCCGTGATGGACTTGATGGTTCTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          GGGCCGACCGCCCTTCCATGTTGCCGGAAGTTTTATTATGTCGGATCTCACGTACCCGTT
rJMSF007K07+          GGGCCGACCGCCCTTCCATGTTGCCGGAAGTTTTATTATGTCGGATCTCACGTACCCGTT
                      ____________________________________________________________
consensus             GGGCCGACCGCCCTTCCATGTTGCCGGAAGTTTTATTATGTCGGATCTCACGTACCCGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          CTAAAATACCTGATGTGGATTACGGTTGGGGCAAAGCAGTTTTTGGCGGGGTGGCTCATG
rJMSF007K07+          CTAAAATACCTGATGTGGATTACGGTTGGGGCAAAGCAGTTTTTGGCGGGGTGGCTCATG
                      ____________________________________________________________
consensus             CTAAAATACCTGATGTGGATTACGGTTGGGGCAAAGCAGTTTTTGGCGGGGTGGCTCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          GAGGTGCCGGTGATGTTCCAGGTGTGATTACCTTTCACGTGCCATATGAAAATAAGAAAG
rJMSF007K07+          GAGGTGCCGGTGATGTTCCAGGTGTGATTACCTTTCACGTGCCATATGAAAATAAGAAAG
                      ____________________________________________________________
consensus             GAGGTGCCGGTGATGTTCCAGGTGTGATTACCTTTCACGTGCCATATGAAAATAAGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          GCGAAAATGGCACTTTGATTCCTATTTGCTTGCCGGCCGTCGCAATGGACAAATTTGTGA
rJMSF007K07+          GCGAAAATGGCACTTTGATTCCTATTTGCTTGCCGGCCGTCGCAATGGACAAATTTGTGA
                      ____________________________________________________________
consensus             GCGAAAATGGCACTTTGATTCCTATTTGCTTGCCGGCCGTCGCAATGGACAAATTTGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          ATGAGCTAGCAAATACTTTCATCAGGGCTGCTTTATGAATGAGTCTGCATGAATAGCTCG
rJMSF007K07+          ATGAGCTAGCAAATACTTTCATCAGGGCTGCTTTATGAATGAGTCTGCATGAATAGCTCG
                      ____________________________________________________________
consensus             ATGAGCTAGCAAATACTTTCATCAGGGCTGCTTTATGAATGAGTCTGCATGAATAGCTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019D21+          GTTGGTTACTGAGTGACAAATTATTAGCAGATCAAGTGTTAAGAAC              
rJMSF007K07+          GTTGGTTACTGAGTGACAAATTATTAGCAGATCAAGTGTTAAGAACTTAAGATTCAGTAA
                      ____________________________________________________________
consensus             GTTGGTTACTGAGTGACAAATTATTAGCAGATCAAGTGTTAAGAACTTAAGATTCAGTAA