Contig 008435:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007G01Sequence367022035ref|XP_010323234.1|9e-42PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [So762008435 (2)ref|XP_009608072.1|1e-126PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 iso
JMSF033K15Sequence100008435 (2)ref|XP_009608071.1|6e-05PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 iso

Alignment

This contig is upended


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rJMSF007G01+                            ATCTTCACAAATGCTGCAAGCATCGGATAATCCATCGCGACA
                      ____________________________________________________________
consensus                               ATCTTCACAAATGCTGCAAGCATCGGATAATCCATCGCGACA
 
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rJMSF007G01+          TTAAAGCCTCCAATGTTCTCTTAGGTCCAGACTATGAACCCCAGATTTCAGATTTCGGGT
                      ____________________________________________________________
consensus             TTAAAGCCTCCAATGTTCTCTTAGGTCCAGACTATGAACCCCAGATTTCAGATTTCGGGT
 
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rJMSF007G01+          TGGCGAAATGGCTGCCAAACAAATGGACACACCATGCTGTGATTCCAATTGAGGGTACAT
                      ____________________________________________________________
consensus             TGGCGAAATGGCTGCCAAACAAATGGACACACCATGCTGTGATTCCAATTGAGGGTACAT
 
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rJMSF007G01+          TTGGGTACTTGGCTCCAGAGTATTTCATGTATGGAATTGTTGATGAGAAAATAGATGTTT
                      ____________________________________________________________
consensus             TTGGGTACTTGGCTCCAGAGTATTTCATGTATGGAATTGTTGATGAGAAAATAGATGTTT
 
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rJMSF007G01+          TTGCATTTGGGATTCTTCTTCTTGAGATCATCACTGGCAGGAGGCCTGTTGATTCATCAA
                      ____________________________________________________________
consensus             TTGCATTTGGGATTCTTCTTCTTGAGATCATCACTGGCAGGAGGCCTGTTGATTCATCAA
 
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rJMSF007G01+          GGCAAAACCTGCTTCTTTGGGCAAAGCCATTAATGGAAGGTGGGAAATTAGATGAGCTAG
                      ____________________________________________________________
consensus             GGCAAAACCTGCTTCTTTGGGCAAAGCCATTAATGGAAGGTGGGAAATTAGATGAGCTAG
 
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rJMSF007G01+          CAGATCCAAGATTAGAAGGTGAGTATGAAATGGACCAACTACACAGGATAGTTCTAACTG
                      ____________________________________________________________
consensus             CAGATCCAAGATTAGAAGGTGAGTATGAAATGGACCAACTACACAGGATAGTTCTAACTG
 
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rJMSF033K15+                                             CCAACCATGGCAGAGNCGTTAGACA
rJMSF007G01+          CTTCCTACTGCGTAAGGCAATCCTCAATGTGGCGCCCAACCATGACAGAGGTGTTAGACT
                      ____________________________________________________________
consensus             CTTCCTACTGCGTAAGGCAATCCTCAATGTGGCGCCCAACCATGGCAGAGGTGTTAGACT
 
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rJMSF033K15+          TGTTCCGCTANGGAGANGATTCAGANGCAGCAAGAAGTTGGAGAATACCGAAGTTNGCAA
rJMSF007G01+          TGTTACGCTATGGAGATGATTCAGAGGCAGCAAGAAGTTGGAGAATACCGAAGTTTACAA
                      ____________________________________________________________
consensus             TGTTCCGCTATGGAGATGATTCAGAGGCAGCAAGAAGTTGGAGAATACCGAAGTTTGCAA
 
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rJMSF033K15+          NTGATGAGATGGATG                                             
rJMSF007G01+          GTGATGAGATGGATGACTGCTCTATGGTCTTTGGATATGACCTTCCCTCGGATTTAATAG
                      ____________________________________________________________
consensus             GTGATGAGATGGATGACTGCTCTATGGTCTTTGGATATGACCTTCCCTCGGATTTAATAG
 
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rJMSF007G01+          TAGAGGACCTATATTAGGCTATCATTATTTTTATTTTATTCTTATTTTATTTTTGGCTTA
                      ____________________________________________________________
consensus             TAGAGGACCTATATTAGGCTATCATTATTTTTATTTTATTCTTATTTTATTTTTGGCTTA
 
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rJMSF007G01+          CTTATAGTTCATTCTGATTATCATTATCATTATTATTAACATTTATATTTTATATTATAA
                      ____________________________________________________________
consensus             CTTATAGTTCATTCTGATTATCATTATCATTATTATTAACATTTATATTTTATATTATAA
 
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rJMSF007G01+          TCTCCTTCTCAATATATAACCCAATGTTACTCTCTTTTATACCAATGTATGACCTAACAA
                      ____________________________________________________________
consensus             TCTCCTTCTCAATATATAACCCAATGTTACTCTCTTTTATACCAATGTATGACCTAACAA