Contig 008433:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS167G01Sequence592008433 (4)ref|XP_004244079.1|1e-95PREDICTED: fimbrin-1 [Solanum lycopersicum] ref|XP_010324295.1| PREDICTED: fimbr
JMSF006A09Sequence248013230 (5)ref|XP_009625354.1|3e-18PREDICTED: SUMO-activating enzyme subunit 1B-1-like [Nicotiana tomentosiformis]299008433 (4)
JMSF007C16Sequence299000608 (4)ref|XP_004167407.1|1e-06PREDICTED: fimbrin-like protein 2-like, partial [Cucumis sativus]814008433 (4)emb|CDP13763.1|2e-35unnamed protein product [Coffea canephora]
JMSF013K10Sequence545000608 (4)ref|XP_009784172.1|7e-48PREDICTED: fimbrin-1-like isoform X2 [Nicotiana sylvestris]676008433 (4)emb|CDP13763.1|2e-04unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS167G01-                                                 AGTAGAGAATTGCAACCAAGTT
                      ____________________________________________________________
consensus                                                   AGTAGAGAATTGCAACCAAGTT
 
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JMFS167G01-           GTCAGGATTGGGAAGCAGTTAAAACTCTCTTTGGTGAATGTGGGTGGAAATGACTTTGTT
                      ____________________________________________________________
consensus             GTCAGGATTGGGAAGCAGTTAAAACTCTCTTTGGTGAATGTGGGTGGAAATGACTTTGTT
 
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JMFS167G01-           CAGGGGAACAAAAAACTTACTCTTGCATTCTTGTGGCAGTTAATGAGGTTTAACATGCTC
                      ____________________________________________________________
consensus             CAGGGGAACAAAAAACTTACTCTTGCATTCTTGTGGCAGTTAATGAGGTTTAACATGCTC
 
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JMFS167G01-           CAACTCTTGAAGAACTTGAGATCCCGCTTTCAAGGCAAGGAGATTAGTGATGTTGATATC
                      ____________________________________________________________
consensus             CAACTCTTGAAGAACTTGAGATCCCGCTTTCAAGGCAAGGAGATTAGTGATGTTGATATC
 
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JMFS167G01-           CTGAATTGGGCAAACAAAAAAGTGAAAAGCACAGGAAGAACATCTCGAATGGAGAGCTTC
                      ____________________________________________________________
consensus             CTGAATTGGGCAAACAAAAAAGTGAAAAGCACAGGAAGAACATCTCGAATGGAGAGCTTC
 
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JMFS167G01-           AAGGACAAGAGCCTTTCAAGTGGGTTATTTTTCCTCGAGCTTCTCAGTGCAGTGGAGCCA
                      ____________________________________________________________
consensus             AAGGACAAGAGCCTTTCAAGTGGGTTATTTTTCCTCGAGCTTCTCAGTGCAGTGGAGCCA
 
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JMFS167G01-           CGGGTTGTTAACTGGAACCTTGTTTCTAAGGGTGAAAGCGATGATGAAAAGAAATTAAAT
rJMSF007C16+                                    TAAGGGTGAAAGCGATGATGAAAAGAAATTAAAT
                      ____________________________________________________________
consensus             CGGGTTGTTAACTGGAACCTTGTTTCTAAGGGTGAAAGCGATGATGAAAAGAAATTAAAT
 
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JMFS167G01-           GCTACATATATCATTAGTGTTGCCCGGAAACTTGGATGTTCAATATTTTTGCTGCCCGAG
rJMSF007C16+          GCTACATATATCATTAGTGTTGCCCGGAAACTTGGATGTTCAATATTTTTGCTGCCCGAG
                      ____________________________________________________________
consensus             GCTACATATATCATTAGTGTTGCCCGGAAACTTGGATGTTCAATATTTTTGCTGCCCGAG
 
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JMFS167G01-           GATATCATGGAGGTCAACCAAAAGATGATCTTAACTCTCACTGCCAGCATTATGTACTGG
rJMSF013K10+                                                  CTGCCAGCATTATGTACTGG
rJMSF007C16+          GATATCATGGAGGTCAACCAAAAGATGATCTTAACTCTCACTGCCAGCATTATGTACTGG
                      ____________________________________________________________
consensus             GATATCATGGAGGTCAACCAAAAGATGATCTTAACTCTCACTGCCAGCATTATGTACTGG
 
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JMFS167G01-           AGCCTTCAGCAACCGGTGAATGATTCAGAGTCGTCTCCTTCGCCTGCTACTTCCGAGGCA
rJMSF013K10+          AGCCTTCAGCAACCGGTGAATGATTCAGAGTCGTCTCCTTCGCCTGCTACTTCCGAGGCA
rJMSF007C16+          AGCCTTCAGCAACCGGTGAATGATTCAGAGTCGTCTCCTTCGCCTGCTACTTCCGAGGCA
                      ____________________________________________________________
consensus             AGCCTTCAGCAACCGGTGAATGATTCAGAGTCGTCTCCTTCGCCTGCTACTTCCGAGGCA
 
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JMFS167G01-           TCCCCAGCTCCTTCGACAA                                         
rJMSF013K10+          TCCCCAGCTCCTTCGACAAATGGCTCATCATCTCCTCCTGCTGGTCCCGCTACCCCTGAT
rJMSF007C16+          TCCCCAGCTCCTTCGACAAATGGCTCATCATCTCCTCCTGCTGGTCCCGCTACCCCTGAT
                      ____________________________________________________________
consensus             TCCCCAGCTCCTTCGACAAATGGCTCATCATCTCCTCCTGCTGGTCCCGCTACCCCTGAT
 
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rJMSF013K10+          GCATCCCCAGCTCCTTCGACAAATGGCTTGTCATCTCCCGCTGTAGCACTTTCCCCCGAT
rJMSF007C16+          GCATCCCCAGCTCCTTCGACAAATGGCTTGTCATCTCCCGCTGTAGCACTTTCCCCCGAT
                      ____________________________________________________________
consensus             GCATCCCCAGCTCCTTCGACAAATGGCTTGTCATCTCCCGCTGTAGCACTTTCCCCCGAT
 
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rJMSF013K10+          TCATCCCCAGCACCATCTGTCAACGGGGAAGATGACAGCTCACTCGTTGGAGTGTCGAAT
rJMSF007C16+          TCATCCCCAGCACCATCTGTCAACGGGGAAGATGACAGCTCACTCGTTGGAGTGTCGAAT
                      ____________________________________________________________
consensus             TCATCCCCAGCACCATCTGTCAACGGGGAAGATGACAGCTCACTCGTTGGAGTGTCGAAT
 
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rJMSF013K10+          CTGACCATCAACGATGCTGCCTCTGATTCTACAGTCTCGTCTTCACTGGTTGAAAGCGAG
rJMSF007C16+          CTGACCATCAACGATGCTGCCTCTGATTCTACAGTCTCGTCTTCACTGGTTGAAAGCGAG
                      ____________________________________________________________
consensus             CTGACCATCAACGATGCTGCCTCTGATTCTACAGTCTCGTCTTCACTGGTTGAAAGCGAG
 
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rJMSF013K10+          GGCAATGTGTCACAGAAGGCTACGTCTTCACAGGTTGAATACGAAGACACGGAGTCGCAG
rJMSF006A09+                                   CTTCACAGGTTGAATACGAAGACACGGAGTCGCAG
rJMSF007C16+          GGCAATGTGTCACAGAAGGCTACGTCTTCACAGGTTGAATACGAAGACACGGAGTCGCAG
                      ____________________________________________________________
consensus             GGCAATGTGTCACAGAAGGCTACGTCTTCACAGGTTGAATACGAAGACACGGAGTCGCAG
 
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rJMSF013K10+          GAGGTCTCATCGAAACCAGTCGAGCACGAGGAGACAGAAGCAGAGGAGGAGGTTTCCTCA
rJMSF006A09+          GAGGTCTCATCGAAACCAGTCGNGCACGAGGAGACAGAAGCAGAGGAGGAGGTTTCNTCN
rJMSF007C16+          GAGGTCTCATCGAAACCAGTCGAGCACGAGGAGACAGAAGCAGAGGAGGAGGTTTCCTCA
                      ____________________________________________________________
consensus             GAGGTCTCATCGAAACCAGTCGAGCACGAGGAGACAGAAGCAGAGGAGGAGGTTTCCTCA
 
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rJMSF013K10+          TCCCAAGTTGAGAAACAAGATCCCCGGTCACAGAGTGATACATAGCTGAAGGTCATTTCC
rJMSF006A09+          TCCCAAGTTGAGAAACAAGATCCCCGGTCACAGAGTGATACATAGCTGAAGGTCATNTCC
rJMSF007C16+          TCCCAAGTTGAGAAACAAGATCCCCGGTCACAGAGTGATACATAGCTGAAGGTCATTTCC
                      ____________________________________________________________
consensus             TCCCAAGTTGAGAAACAAGATCCCCGGTCACAGAGTGATACATAGCTGAAGGTCATTTCC
 
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rJMSF013K10+          ATTTTAAGCTGGAGGAGGGATGATGAATAAGAAAAGCGCAGAGACAGATATAAACATAAA
rJMSF006A09+          ATTTTAAGCTGGAGGAGGGATGATGAATNAGANAAGCGCAGAGACAGATATAAACATAAA
rJMSF007C16+          ATTTTAAGCTGGAGGAGGGATGATGAATAAGAAAAGCGCAGAGACAGATATAAACATAAA
                      ____________________________________________________________
consensus             ATTTTAAGCTGGAGGAGGGATGATGAATAAGAAAAGCGCAGAGACAGATATAAACATAAA
 
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rJMSF013K10+          CAAAAATATAGGAAAATCATCTAAAAAATTATATAAATAGTCTCCCTTAGCATATTCATA
rJMSF006A09+          CAAAAATATANGAAAATCATCTAAAAAATTATATCAATNGTCTCCCTTAGCATATTCATA
rJMSF007C16+          CAAAAATATAGGAAAATCATCTAAAAAATTATATAAATAGTCTCCCTTAGCATATTCATA
                      ____________________________________________________________
consensus             CAAAAATATAGGAAAATCATCTAAAAAATTATATAAATAGTCTCCCTTAGCATATTCATA
 
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rJMSF013K10+          CACAAATTCTACAGTGTCACCTTGTTAGTTCTCAAATATATAC                 
rJMSF006A09+          CACAAATTCTAC                                                
rJMSF007C16+          CACAAATTCTACAGTGTCACCTTGTTAGTTCTCAAATATATACACTGAGTTTGCTCTAAG
                      ____________________________________________________________
consensus             CACAAATTCTACAGTGTCACCTTGTTAGTTCTCAAATATATACACTGAGTTTGCTCTAAG