Contig 008432:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF007B12-            GGTCTAAGCTCCGGAGCCATCAGCCATGGCCTCCATCTCCCTCCTCACTACTACTACTA
JMSF035O21-                         GAGCCATCAGCCATGGCCTCCATCTCCCTCCTCACTACTACTACTA
                      ____________________________________________________________
consensus              GGTCTAAGCTCCGGAGCCATCAGCCATGGCCTCCATCTCCCTCCTCACTACTACTACTA
 
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JMSF007B12-           CTGCATCACCTCTCTCCCGCCCAGTTCCCTCGCCACTATGTTCTTCCATGAGGATTTCGC
JMSF035O21-           CTGCATCACCTCTCTCCCGCCCAGTTCCCTCGCCACTATGTTCTTCCATGAGGATTTCGC
rJMSF007B12+                                                  TTCTTCCATGAGGATTTCGC
                      ____________________________________________________________
consensus             CTGCATCACCTCTCTCCCGCCCAGTTCCCTCGCCACTATGTTCTTCCATGAGGATTTCGC
 
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JMSF007B12-           TTCCACTCCACCACCCCAAGAAGCTCCGCACGCGCTCAACACTTCACGCTTCTGCAGTTT
JMSF035O21-           TTCCACTCCACCACCCCAAGAAGCTCCGCACGCGCTCAACACTTCACGCTTCTGCAGTTT
rJMSF035O21+                              AAGCTCCGCACGCGCTCAACACTTCACGCTTNTGCAGTTT
rJMSF007B12+          TTCCACTCCACCACCCCAAGAAGCTCCGCACGCGCTCAACACTTCACGCTTCTGCAGTTT
                      ____________________________________________________________
consensus             TTCCACTCCACCACCCCAAGAAGCTCCGCACGCGCTCAACACTTCACGCTTCTGCAGTTT
 
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JMSF007B12-           CCGCACCGTCGCTATCCAAGCCCGATGATCTCGTCAATGCTCTTCTTTCT          
JMSF035O21-           CCGCACCGTCGCTATCCAAGCCCGATGATCTCGTCAATGCTCTTCTTTCTAAGGTTGTGC
rJMSF035O21+          CCGCACCGTCGCTATCCAAGCCCGATGATCTCGTCAATGCTCTTCTTTCTAAGGTTGTGC
rJMSF007B12+          CCGCACCGTCGCTATCCAAGCCCGATGATCTCGTCAATGCTCTTCTTTCTAAGGTTGTGC
                      ____________________________________________________________
consensus             CCGCACCGTCGCTATCCAAGCCCGATGATCTCGTCAATGCTCTTCTTTCTAAGGTTGTGC
 
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JMSF035O21-           AAACAGATAGAGGAGTTTTGTTGACCACAGAAGAGCATGGAAAGGTGGCTGAGATGGCTA
rJMSF035O21+          AAACAGATAGAGGAGTTTTGTTGACCACAGAAGAGCATGGAAAGGTGGCTGAGATGGCTA
rJMSF007B12+          AAACAGATAGAGGAGTTTTGTTGACCACAGAAGAGCATGGAAAGGTGGCTGAGATGGCTA
                      ____________________________________________________________
consensus             AAACAGATAGAGGAGTTTTGTTGACCACAGAAGAGCATGGAAAGGTGGCTGAGATGGCTA
 
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JMSF035O21-           GTGATTTGGAGAGCTTCTGTGTTGATGAACCTGTTAAGTGCCCTCTAATATTTGGAGAAT
rJMSF035O21+          GTGATTTGGAGAGCTTCTGTGTTGATGAACCTGTTAAGTGCCCTCTAATATTTGGAGAAT
rJMSF007B12+          GTGATTTGGAGAGCTTCTGTGTTGATGAACCTGTTAAGTGCCCTCTAATATTTGGAGAAT
                      ____________________________________________________________
consensus             GTGATTTGGAGAGCTTCTGTGTTGATGAACCTGTTAAGTGCCCTCTAATATTTGGAGAAT
 
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JMSF035O21-           GGGATGTAGTCTACTGCTCAAATCCCACATCACCAGGCGGTCTCTATAGGAGTGCAGTTG
rJMSF035O21+          GGGATGTAGTCTACTGCTCAAATCCCACATCACCAGGCGGTCTCTATAGGAGTGCAGTTG
rJMSF007B12+          GGGATGTAGTCTACTGCTCAAATCCCACATCACCAGGCGGTCTCTATAGGAGTGCAGTTG
                      ____________________________________________________________
consensus             GGGATGTAGTCTACTGCTCAAATCCCACATCACCAGGCGGTCTCTATAGGAGTGCAGTTG
 
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JMSF035O21-           GTCGCCTTTTCTTCAAAACCAAAGAAATGATTCAGGTTCTTGAAGCCCCTGACACCGTGA
rJMSF035O21+          GTCGCCTTTTCTTCAAAACCAAAGAAATGATTCAGGTTCTTGAAGCCCCTGACACCGTGA
rJMSF007B12+          GTCGCCTTTTCTTCAAAACCAAAGAAATGATTCAGGTTCTTGAAGCCCCTGACACCGTGA
                      ____________________________________________________________
consensus             GTCGCCTTTTCTTCAAAACCAAAGAAATGATTCAGGTTCTTGAAGCCCCTGACACCGTGA
 
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JMSF035O21-           GAAACAAAGTCTCCTTCTCTCTTTTTGGATTCCTTGATGGAGAAGTTTCTTTGAAAGGGA
rJMSF035O21+          GAAACAAAGTCTCCTTCTCTCTTTTTGGATTCCTTGATGGAGAAGTTTCTTTGAAAGGGA
rJMSF007B12+          GAAACAAAGTCTCCTTCTCTCTTTTTGGATTCCTTGATGGAGAAGTTTCTTTGAAAGGGA
                      ____________________________________________________________
consensus             GAAACAAAGTCTCCTTCTCTCTTTTTGGATTCCTTGATGGAGAAGTTTCTTTGAAAGGGA
 
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JMSF035O21-           AATTGAATGTTCTTGATGAAAAATGGATTCAAGTGGTGTTTGAGTCGCCTG         
rJMSF035O21+          AATTGAATGTTCTTGATGAAAAATGGATTCAAGTGGTGTTTGAGTCGCCTGAAATTAAGA
rJMSF007B12+          AATTGAATGTTCTTGATGAAAAATGGATTCAAGTGGTGTTTGAGTCGCCTGAAATTAAGA
                      ____________________________________________________________
consensus             AATTGAATGTTCTTGATGAAAAATGGATTCAAGTGGTGTTTGAGTCGCCTGAAATTAAGA
 
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rJMSF035O21+          TAGGCGGGTTAGAAACGCGATATGGTGGCGAGAGTGAAGTTAAACTGGAGATCATATACA
rJMSF007B12+          TAGGCGGGTTAGAAACGCGATATGGTGGCGAGAGTGAAGTTAAACTGGAGATCATATACA
                      ____________________________________________________________
consensus             TAGGCGGGTTAGAAACGCGATATGGTGGCGAGAGTGAAGTTAAACTGGAGATCATATACA
 
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rJMSF035O21+          TAGATGAGAAGATGAGGCTGGGAAAGGGGTCTAGAGGTTCATTATTTGTTTTCCAGCGAC
rJMSF007B12+          TAGATGAGAAGATGAGGCTGGGAAAGGGGTCTAGAGGTTCATTATTTGTTTTCCAGCGAC
                      ____________________________________________________________
consensus             TAGATGAGAAGATGAGGCTGGGAAAGGGGTCTAGAGGTTCATTATTTGTTTTCCAGCGAC
 
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rJMSF035O21+          GAGGTACCTTTTAAATCTTCATATTGTACAAGTAAAACCGGCCTTGTGTGTATAGTTCAA
rJMSF007B12+          GAGGTACCTTTTAAATCTTCATATTGTACAAGTAAAACCGGCCTTGTGTGTATAGTTCAA
                      ____________________________________________________________
consensus             GAGGTACCTTTTAAATCTTCATATTGTACAAGTAAAACCGGCCTTGTGTGTATAGTTCAA
 
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rJMSF035O21+          CAAGCTAGCTTATCCGATCCAAGAAAAATCATTGTTTTCTTATACATTTTGTGGTGATAG
rJMSF007B12+          CAAGCTAGCTTATCCGATCCAAGAAAAATCATTGTTTTCTTATACATTTTGTGGTGATAG
                      ____________________________________________________________
consensus             CAAGCTAGCTTATCCGATCCAAGAAAAATCATTGTTTTCTTATACATTTTGTGGTGATAG