Contig 008431:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008E20+                                   TCCAAGTATTCAAAGAATGCTTCTGCCGTGCCATG
                      ____________________________________________________________
consensus                                      TCCAAGTATTCAAAGAATGCTTCTGCCGTGCCATG
 
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rJMSF008E20+          AAACATAGATGTTGATCGATACTCCTTTTGTCCAAATGCCCACATAGAGAGCAGACCTAA
                      ____________________________________________________________
consensus             AAACATAGATGTTGATCGATACTCCTTTTGTCCAAATGCCCACATAGAGAGCAGACCTAA
 
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rJMSF008E20+          TATGACAACATTACCTGCAACCGAGGCCAGCTGCTTTCACGGGTGTGCCCCCATCAACTT
JMFN032B10-                          TGCAACCGAGGCCAGCTGCTTTCACGGGTGTGCCCCCATCAACTT
                      ____________________________________________________________
consensus             TATGACAACATTACCTGCAACCGAGGCCAGCTGCTTTCACGGGTGTGCCCCCATCAACTT
 
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rJMSF008E20+          ACTGTGGATGATACCATTCCTACAACCAAGTGCCCTTGCCTCTATTTAAAAAACTTGTTC
JMFN032B10-           ACTGTGGATGATACCATTCCTACAACCAAGTGCCCTTGCCTCTATTTAAAAAACTTGTTC
                      ____________________________________________________________
consensus             ACTGTGGATGATACCATTCCTACAACCAAGTGCCCTTGCCTCTATTTAAAAAACTTGTTC
 
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rJMSF008E20+          GCGAAACCTTCCTGGCTATACACATCTGCTTAAAGTGAGTTTCAATGTCCATCAACTTTG
JMFN032B10-           GCGAAACCTTCCTGGCTATACACATCTGCTTAAAGTGAGTTTCAATGTCCATCAACTTTG
                      ____________________________________________________________
consensus             GCGAAACCTTCCTGGCTATACACATCTGCTTAAAGTGAGTTTCAATGTCCATCAACTTTG
 
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rJMSF008E20+          CGCGACATTACTATGGGTTTGTTGTATCATTTCCACCCCCTGGCCCATAAAGCCTCATTA
JMFN032B10-           CGCGACATTACTATGGGTTTGTTGTATCATTTCCACCCCCTGGCCCATAAAGCCTCATTA
rJMSF006N04+                                                                    TA
                      ____________________________________________________________
consensus             CGCGACATTACTATGGGTTTGTTGTATCATTTCCACCCCCTGGCCCATAAAGCCTCATTA
 
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rJMSF008E20+          GCGCTTCACTATAATCACAATGTTTGAAAGCCGGCTCATCCATGGATGATTCGGTATGAC
JMFN032B10-           GCGCTTCACTATAATCACAATGTTTGAAAGCCGGCTCATCCATGGATGATTCGGTATGAC
rJMSF006N04+          GCGCTTCACNATAATCACAATGTTTGAAAGCCGGCTCATCCATGGATGATTCGGTATGAC
                      ____________________________________________________________
consensus             GCGCTTCACTATAATCACAATGTTTGAAAGCCGGCTCATCCATGGATGATTCGGTATGAC
 
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rJMSF008E20+          CTGAATGTGTAGCTTTGGTTCTATTCTGTGGTGATCATGGCGAGATGGGAGATGATGGGG
JMFN032B10-           CTGAATTTGTAGCTTTGGTTCTATTCTGTGGTGATCATGGCGAGATGGGAGATGATGGGG
rJMSF006N04+          CTGAATGTGTAGCTTTGGTTCTATTCTGTGGNGATCATGNCGAGATGGGAGATGATGGGG
                      ____________________________________________________________
consensus             CTGAATGTGTAGCTTTGGTTCTATTCTGTGGTGATCATGGCGAGATGGGAGATGATGGGG
 
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rJMSF008E20+          ATGTAGATTTGAATAGTTTAGTAGATGGCTTTGTTTGCCGGAGCAGACTCCAAATTTTGA
JMFN032B10-           ATGTAGATTTGAATAGTTTAGTAGATGGCTTTGTTTGCCGGAGCAGACTCCAAATTTTGA
rJMSF006N04+          ATGTAGATNTGAATAGTTTAGTAGATGGCTNTGTTTGCCGGAGCAGACTCCAAATTTTGA
                      ____________________________________________________________
consensus             ATGTAGATTTGAATAGTTTAGTAGATGGCTTTGTTTGCCGGAGCAGACTCCAAATTTTGA
 
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rJMSF008E20+          CGGTTCCAGCCTCTGGTGGTTGGTCGAGGACTCGAGGTTGTTAAACTTGACCAAACCTCT
JMFN032B10-           CGGTTCCAGCCTCTGGTGGTTGGTCGAGGACTCGAGGTTGTTAAACTTGACCAAACCTCT
rJMSF006N04+          CGGTTCCAGCCTCTGGTGGTTGGTCGAGGACTCGAGGTTGTTAAACNTGACCAAACCTCT
                      ____________________________________________________________
consensus             CGGTTCCAGCCTCTGGTGGTTGGTCGAGGACTCGAGGTTGTTAAACTTGACCAAACCTCT
 
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rJMSF008E20+          CTTCTTGGTTCCTCTTCGTTACGAGGAAAAATTTTGTGTTGTATCGTTACATTCTCTGCT
JMFN032B10-           CTTCTTGGTTCCTCTTCGTTACGAGGAAAAATTTTGTGTTGTATCGTTACATTCTCTGCT
rJMSF006N04+          CTTCTTGGTTCCTCTTCGTTACGAGGAAAAATTTTGCGTTGTATCGTTACATTCTCTGCT
                      ____________________________________________________________
consensus             CTTCTTGGTTCCTCTTCGTTACGAGGAAAAATTTTGTGTTGTATCGTTACATTCTCTGCT
 
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rJMSF008E20+          GGTGTGAATGTACTGAGGTAGATGTCATAGTCTCCATCCTATCCCTCCCTCCTTGTATAG
JMFN032B10-           GGTGTGAATGTACTGAGGTAGATGTCATAGTCTCCATCCTATCCCTCCCTCCTTGTATAG
rJMSF006N04+          GGTGTGAATGTACTGAGGTAGATNTCATAGTCTCCATCCTATCCCTCCCTCCTNGCATAG
                      ____________________________________________________________
consensus             GGTGTGAATGTACTGAGGTAGATGTCATAGTCTCCATCCTATCCCTCCCTCCTTGTATAG
 
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rJMSF008E20+          GATGGTTTTTCCTTTTCGTTTAGTGTCTTTCTTTTTG                       
JMFN032B10-           GATGGTTTTTCCTTTTCGTTTAGTGTCTTTCTTTTTGTATAA                  
rJMSF006N04+          GATGGTTTTTCCTTTTCGNTTAGCGTCTTTCTTTTTGTATAAAGGCTCTGATTAATGCAA
                      ____________________________________________________________
consensus             GATGGTTTTTCCTTTTCGTTTAGTGTCTTTCTTTTTGTATAAAGGCTCTGATTAATGCAA