Contig 008429:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009C19+                      CAGCNAAATGGTGTTGCCGAACGNTTGAACAGGACTCTATTGGAAAGA
                      ____________________________________________________________
consensus                         CAGCNAAATGGTGTTGCCGAACGNTTGAACAGGACTCTATTGGAAAGA
 
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rJMSF009C19+          GCTCGTTGTATGCTCTCTAATGCTGGGTTATGGAAACGGCGTGATTTTTGGGCCGAGGCC
                      ____________________________________________________________
consensus             GCTCGTTGTATGCTCTCTAATGCTGGGTTATGGAAACGGCGTGATTTTTGGGCCGAGGCC
 
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rJMSF009C19+          GTTTCTACTGCTTGCTATTTGGTAAATAGATCTCCACATTCATCCCTTGATTTCAAAATT
                      ____________________________________________________________
consensus             GTTTCTACTGCTTGCTATTTGGTAAATAGATCTCCACATTCATCCCTTGATTTCAAAATT
 
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rJMSF009C19+          CCAGAGGAAGTTTGGTCAGGTAATCCTGTTGATTACTCTATCTTAAGAGTTTTTGGATGT
                      ____________________________________________________________
consensus             CCAGAGGAAGTTTGGTCAGGTAATCCTGTTGATTACTCTATCTTAAGAGTTTTTGGATGT
 
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rJMSF009C19+          CCTGCTTATGCTCATTCCAGTACGGGTAAATTAAACCCGAGAGCTGTCAAATGCATTTTC
rJMSF020D07+                TATGCTCATTCCAGTACGGGTAAATTAAACCCGAGAGCTGTCAAATGCATTTTC
                      ____________________________________________________________
consensus             CCTGCTTATGCTCATTCCAGTACGGGTAAATTAAACCCGAGAGCTGTCAAATGCATTTTC
 
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rJMSF009C19+          CTTGGTTATGCTTCTGAGTCAAAAGGGTATCGTCTATGGTCTCCTGATTCTCGGAAAATC
JMFN005H17-                             TCAAAAGGGTATCGTCTATGGTCTCCTGATTCTCAGAAAATC
rJMSF020D07+          CTTGGTTATGCTTCTGAGTCAAAAGGGTATCGTCTATGGTCTCCTGATTCTCGGAAAATC
                      ____________________________________________________________
consensus             CTTGGTTATGCTTCTGAGTCAAAAGGGTATCGTCTATGGTCTCCTGATTCTCGGAAAATC
 
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rJMSF009C19+          ATTCTGAGTCGAGATATCACTTTTGATGAAAATGCACTACTTTCTTCTGGAAAAGTTCCC
JMFN005H17-           ATTCTGAGTCGAGATATCACTTTTGATGAAAATGCACTACTTTCTTCTGGAAAAGTTCCC
rJMSF020D07+          ATTCTGAGTCGAGATATCACTTTTGATGAAAATGCACTACTTTCTTCTGGAAAAGTTCCC
                      ____________________________________________________________
consensus             ATTCTGAGTCGAGATATCACTTTTGATGAAAATGCACTACTTTCTTCTGGAAAAGTTCCC
 
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rJMSF009C19+          AGTACTGGTGAGACGCAAAGTACTGGTGAGAAGGTGGAGTTTGAGTTCAGGCCTAGTGAT
JMFN005H17-           AGTACAGGTGAGACGCAGAGTACTGGTGAGAAGGTGGAGTTTGAGTTCAGGCCTATTGAT
rJMSF020D07+          AGTACTGGTGAGACGCAAAGTACTGGTGAGAAGGTGGAGTTTGAGTTCAGGCCTAGTGAT
                      ____________________________________________________________
consensus             AGTACTGGTGAGACGCAAAGTACTGGTGAGAAGGTGGAGTTTGAGTTCAGGCCTAGTGAT
 
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rJMSF009C19+          AGTGTTACTACTGCTGATGGTAATACTAAAGATGATGCATCTACTAGCACCGCACCTCTC
JMFN005H17-           AGTGTTACTACTGCTAATGGTAATACTAAAGATGATGCATCTACTAGCGTCGCACCTCTC
rJMSF020D07+          AGTGTTACTACTGCTGATGGTAATACTAAAGATGATGCATCTACTAGCACCGCACCTCTC
                      ____________________________________________________________
consensus             AGTGTTACTACTGCTGATGGTAATACTAAAGATGATGCATCTACTAGCACCGCACCTCTC
 
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rJMSF009C19+          GTCGAGCCACAACGAGAGTATTCCATTGCTATGGATCGGCCTAGAAGGACAATCAAGAAA
JMFN005H17-           GTCGAGCCACAGCGAGAGTATTGCATTGCTATGGATCGTCCTAGGAGGACAATTAAAAAA
rJMSF020D07+          GTCGAGCCACAACGAGAGTATTCCATTGCTATGGATCGGCCTAGAAGGACAATCAAGAAA
                      ____________________________________________________________
consensus             GTCGAGCCACAACGAGAGTATTCCATTGCTATGGATCGGCCTAGAAGGACAATCAAGAAA
 
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rJMSF009C19+          CCTGCTAGGTACGCTAGTGACGATGAAACCAATATGGTTGCTTATGCTCTTTCAGTCGCA
JMFN005H17-           CCTGCTAGGTATGCTAGTGATGATGAAACCAACATGGTTGCTTATGCTCTTTCAGTCGCA
rJMSF020D07+          CCTGCTAGGTACGCTAGTGACGATGAAACCAATATGGTTGCTTATGCTCTTTCAGTCGCA
                      ____________________________________________________________
consensus             CCTGCTAGGTACGCTAGTGACGATGAAACCAATATGGTTGCTTATGCTCTTTCAGTCGCA
 
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rJMSF009C19+          TAGGAAGTTGATGGTGATTCATCCTGCTATTCTGAAGCTTTTCCTATTGCTAAGTTCAAG
JMFN005H17-           TAGGAAGTTGATGGTGATCCATCCTGCTATTTTGAGGTTCTTCCTATTGCTAAGTTCAAG
rJMSF020D07+          TAGGAAGTTGATGGTGATTCATCCTGCTATTCTGAAGCTTTTCCTATTGCTAAGTTCAAG
rJMSF006E16+                                        TCTGAAGCTTTTCCTATTGCTAAGTTCAAG
                      ____________________________________________________________
consensus             TAGGAAGTTGATGGTGATTCATCCTGCTATTCTGAAGCTTTTCCTATTGCTAAGTTCAAG
 
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rJMSF009C19+          CCATACTTGAGTTTAGTCGGCTGTTCCAGTTGTTAATTCCACAATGGATTTGATCCAAGG
JMFN005H17-           CAGCATTTGAGTTTAGTCGACTGTTCCAGTTGTTAATTTCACGATGAATTTGATCCCAGG
rJMSF020D07+          CCATACTTGAGTTTAGTCGGCTGTTCCAGTTGTTAATTCCACAATGGATTTGATCCAAGG
rJMSF006E16+          CCATACTTGAGNTTAGTCGGNTGTTCCAGTTGTTAATTCCACAATGGATNTGATCCAAGA
                      ____________________________________________________________
consensus             CCATACTTGAGTTTAGTCGGCTGTTCCAGTTGTTAATTCCACAATGGATTTGATCCAAGG
 
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rJMSF009C19+          TGGAGAT                                                     
JMFN005H17-           TGGAGATTGTTAG                                               
rJMSF020D07+          TGGAGATTGTTAGAAAACTAAAATATGTGGCTCAAA                        
rJMSF006E16+          TGGAGANNGTTAGAAAACTAAAATATGTGGCTCAAAATCCATGAGACCATTTCTCCATTG
                      ____________________________________________________________
consensus             TGGAGATTGTTAGAAAACTAAAATATGTGGCTCAAAATCCATGAGACCATTTCTCCATTG
 
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rJMSF006E16+          TTAGTGCCACATGTCCACATTGCACTCCAACATTGCATGTCCTTAATNTGCANGCGCACG
                      ____________________________________________________________
consensus             TTAGTGCCACATGTCCACATTGCACTCCAACATTGCATGTCCTTAATNTGCANGCGCACG