Contig 008428:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005P12Sequence275006701 (3)400008428 (2)ref|XP_009590354.1|8e-07PREDICTED: uncharacterized protein LOC104087550 isoform X2 [Nicotiana tomentosi
JMSF045D18Sequence739006701 (3)emb|CDP10040.1|7e-09unnamed protein product [Coffea canephora]726008428 (2)ref|XP_009590354.1|9e-20PREDICTED: uncharacterized protein LOC104087550 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF045D18+                             CCCTCCCGACCCCGACTTGCAACGTTCATTGCGCTTGGCTC
                      ____________________________________________________________
consensus                                CCCTCCCGACCCCGACTTGCAACGTTCATTGCGCTTGGCTC
 
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rJMSF045D18+          TTCGAACCCGAGATGACACCGATGACAACGACACCGTGAGAAGGCCTCCCCACGATGACA
                      ____________________________________________________________
consensus             TTCGAACCCGAGATGACACCGATGACAACGACACCGTGAGAAGGCCTCCCCACGATGACA
 
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rJMSF045D18+          ATGACGACGATGATCTAGATGCTGAGTTAGACGAGCACGATGAGTACGAGGAGAATCATA
                      ____________________________________________________________
consensus             ATGACGACGATGATCTAGATGCTGAGTTAGACGAGCACGATGAGTACGAGGAGAATCATA
 
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rJMSF045D18+          ATTTTCCCTATGGGATTCAAACCGGCCCTGCAAAGAAACCGAAACCAAACGCTTGCTTTG
                      ____________________________________________________________
consensus             ATTTTCCCTATGGGATTCAAACCGGCCCTGCAAAGAAACCGAAACCAAACGCTTGCTTTG
 
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rJMSF045D18+          GAAGTCTAGACTGTAACAAATCTTGAGTTTTCGGCCACAAAATGCAAATGCAGAAGCGAA
                      ____________________________________________________________
consensus             GAAGTCTAGACTGTAACAAATCTTGAGTTTTCGGCCACAAAATGCAAATGCAGAAGCGAA
 
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rJMSF045D18+          CCTAATGTCACCCGATGAGTTGAAAGACAGCAATTTGCAGAAGCGTTGGATGGATCAACG
                      ____________________________________________________________
consensus             CCTAATGTCACCCGATGAGTTGAAAGACAGCAATTTGCAGAAGCGTTGGATGGATCAACG
 
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rJMSF045D18+          GTCTCTTCAGCTCGAAGAGCAGAAGCTGCATATCCAAGCACAGATGTTGGAATTGGAGAA
rJMSF005P12+                               GAAGCNGCATATCCAAGCACAGATGTTGGAATTGGAGAA
                      ____________________________________________________________
consensus             GTCTCTTCAGCTCGAAGAGCAGAAGCTGCATATCCAAGCACAGATGTTGGAATTGGAGAA
 
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rJMSF045D18+          AGAGCGGTTTAAGTGGCAAAGGTTTAGCCAGAAGAAGAACTTCGAGTTGGAAATGATGAG
rJMSF005P12+          AGAGCGGTTTAAGTGGCAAAGGTTTAGCCAGAAGAAGAACTTCGAGTTGGAAATGATGAG
                      ____________________________________________________________
consensus             AGAGCGGTTTAAGTGGCAAAGGTTTAGCCAGAAGAAGAACTTCGAGTTGGAAATGATGAG
 
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rJMSF045D18+          GATGGAGAACGAGAGGATGAAACTCGAGAATGAACGAATGGCGTTAGAGTTGAAGCAGAA
rJMSF005P12+          GATGGAGAACGAGAGGATGAAACTCGAGAATGAACGAATGGCGTTAGAGTTGAAGCAGAA
                      ____________________________________________________________
consensus             GATGGAGAACGAGAGGATGAAACTCGAGAATGAACGAATGGCGTTAGAGTTGAAGCAGAA
 
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rJMSF045D18+          GGAAATGCTTGCAGACAATAATAGTTAAGGTTTACTTTAAACTGCAAGAACTTCTTGTCT
rJMSF005P12+          GGAAATGCTTGCAGACAATAATAGTTAAGGTTTACTTTAAACTGCAAGAACTTCTTGTCT
                      ____________________________________________________________
consensus             GGAAATGCTTGCAGACAATAATAGTTAAGGTTTACTTTAAACTGCAAGAACTTCTTGTCT
 
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rJMSF045D18+          TCTTTATCCGCCCAATTTCCTTTGATTTTCTGGACGGGAAAAATATTTAGGATCGTATGC
rJMSF005P12+          TCTTTATCCGCCCAATTTCCTTTGATTTTCTGGACGGGAAAAATATTTAGGATCGTATGC
                      ____________________________________________________________
consensus             TCTTTATCCGCCCAATTTCCTTTGATTTTCTGGACGGGAAAAATATTTAGGATCGTATGC
 
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rJMSF045D18+          TTTTTAGGACTGTAGTAGCCGCAAAAA-CTGTCGTTTTAGCTGCTTTGCTTGTAATATTA
rJMSF005P12+          TTTTTAGGACTGTAGTAGCCGCAAAAAGCTGTCGTTTTAGCTGCTTTGCTTGTAATATTA
                      ____________________________________________________________
consensus             TTTTTAGGACTGTAGTAGCCGCAAAAAGCTGTCGTTTTAGCTGCTTTGCTTGTAATATTA
 
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rJMSF045D18+          ATGANCTAGAGCTTTTGTATGGTGAA                                  
rJMSF005P12+          ATGA-CTAGAGCTTTTGTATGGTGAAGAGTTGTCTTATATTTTCCATGATAGAATCATAT
                      ____________________________________________________________
consensus             ATGANCTAGAGCTTTTGTATGGTGAAGAGTTGTCTTATATTTTCCATGATAGAATCATAT