Contig 008427:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004B19Sequence317013873 (6)ref|XP_009786717.1|2e-56PREDICTED: malonate--CoA ligase-like [Nicotiana sylvestris]379008427 (2)
JMSF016H02Sequence241000690 (6)740008427 (2)ref|XP_009773798.1|2e-27PREDICTED: cyclin-T1-4-like [Nicotiana sylvestris] ref|XP_009773799.1| PREDICTED

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016H02+ GAGAATGAAAAAAACAAACGTGAANGAAACAAAGCTGGTCTAAATCTTCAATCA
                      ____________________________________________________________
consensus GAGAATGAAAAAAACAAACGTGAANGAAACAAAGCTGGTCTAAATCTTCAATCA
 
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rJMSF016H02+ AGTCAGAGCATGAAAGTTCCCATCAAGATGGGGGTGGAGATGGACAGTACCAAGTGAAGA
                      ____________________________________________________________
consensus AGTCAGAGCATGAAAGTTCCCATCAAGATGGGGGTGGAGATGGACAGTACCAAGTGAAGA
 
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rJMSF016H02+ AAGAGCAGCCATCGCGTAATGCAGATTATGACAATAATGTGGAAGAGGGAGAGCTGGATC
                      ____________________________________________________________
consensus AAGAGCAGCCATCGCGTAATGCAGATTATGACAATAATGTGGAAGAGGGAGAGCTGGATC
 
. : . : . : . : . : . :
rJMSF016H02+ CTTATGATGATATTGACAAGGGATATCATTCCCCAAAGTTGAGCAACCGGAAGCGAAAGG
                      ____________________________________________________________
consensus CTTATGATGATATTGACAAGGGATATCATTCCCCAAAGTTGAGCAACCGGAAGCGAAAGG
 
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rJMSF016H02+ CAACTAGCCCCCCTATGGAGGGTAAGCAGAGGTATGAATATGGCTCAGGGACCCACAACC
                      ____________________________________________________________
consensus CAACTAGCCCCCCTATGGAGGGTAAGCAGAGGTATGAATATGGCTCAGGGACCCACAACC
 
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rJMSF016H02+ ACACATACCATGACTTCCCAGAAGATAGAAACACGGGGAAAATTGCTTATTCAGAAAGAG
                      ____________________________________________________________
consensus ACACATACCATGACTTCCCAGAAGATAGAAACACGGGGAAAATTGCTTATTCAGAAAGAG
 
. : . : . : . : . : . :
rJMSF016H02+ ACCACAAAAGGCATGTGCAGGAGAATCATGTGTGAAATGTGTTTGTTGCCAGCAGCAGCA
                      ____________________________________________________________
consensus ACCACAAAAGGCATGTGCAGGAGAATCATGTGTGAAATGTGTTTGTTGCCAGCAGCAGCA
 
. : . : . : . : . : . :
rJMSF016H02+ GCAGCAGCAGCATTTCTCAGTCATTCTGAATGTTCAACCAGAGTCGGTTGCATTGGATGT
                      ____________________________________________________________
consensus GCAGCAGCAGCATTTCTCAGTCATTCTGAATGTTCAACCAGAGTCGGTTGCATTGGATGT
 
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rJMSF016H02+ CCGTGATTTGGGTTGCTAGAATTTTTTGAGACAGCTTAAACCTCCGACCACTGAGAGAGA
                      ____________________________________________________________
consensus CCGTGATTTGGGTTGCTAGAATTTTTTGAGACAGCTTAAACCTCCGACCACTGAGAGAGA
 
. : . : . : . : . : . :
rJMSF016H02+ GGTTCTATTCATAGAAGAAAAACACAAAGTGTCAGTTTTGAGGAAAGATTTGGCCAGGTA
rJMSF004B19+ AAGATTTGGCCAGGTA
                      ____________________________________________________________
consensus GGTTCTATTCATAGAAGAAAAACACAAAGTGTCAGTTTTGAGGAAAGATTTGGCCAGGTA
 
. : . : . : . : . : . :
rJMSF016H02+ TCCATGTTGGTCCTCTTTTTACTTTGTGAACATGATAGACACAATTCACTATGCTTGCTT
rJMSF004B19+ TCCATGTTGGTCCTCTTTTTACTTNGTGAACATGATAGACACAATTCACTATGCTTGCTT
                      ____________________________________________________________
consensus TCCATGTTGGTCCTCTTTTTACTTTGTGAACATGATAGACACAATTCACTATGCTTGCTT
 
. : . : . : . : . : . :
rJMSF016H02+ ATATGCATGCTTGCGTTTATGGTGCCAGTCCTTGTTGCTATTGGAACATATATGGTAGAA
rJMSF004B19+ ATATGCATGCTTGCGTTTATGGTGCCAGTCCTTGTTGCTATTGGAACATATATGGTAGAA
                      ____________________________________________________________
consensus ATATGCATGCTTGCGTTTATGGTGCCAGTCCTTGTTGCTATTGGAACATATATGGTAGAA
 
. : . : . : . : . : . :
rJMSF016H02+ ATCCAAAGATTGTCAGAACTAGAGTG
rJMSF004B19+ ATCCAAAGATTGTCAGAACTAGAGTGTGCACCTGAACAGGGAAAGAAATAAATAGTTTTG
                      ____________________________________________________________
consensus ATCCAAAGATTGTCAGAACTAGAGTGTGCACCTGAACAGGGAAAGAAATAAATAGTTTTG
 
. : . : . : . : . : . :
rJMSF004B19+ CCATTATGCTGTCTACTCTACTCTACTCTGCAGATCTAGGCTATAGGCTATTGGAGTTGC
                      ____________________________________________________________
consensus CCATTATGCTGTCTACTCTACTCTACTCTGCAGATCTAGGCTATAGGCTATTGGAGTTGC
 
. : . : . : . : . : . :
rJMSF004B19+ ATGAATGTGTTAATGCTTACTAGTCATTTGTTTGTTTCATTTAATGCCAAAAATGTAAGA
                      ____________________________________________________________
consensus ATGAATGTGTTAATGCTTACTAGTCATTTGTTTGTTTCATTTAATGCCAAAAATGTAAGA
 
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rJMSF004B19+ CTTACTTTGAATTCCAGTTTCTTTAATGATAGATAGATTTAGAAATGGAAATAGGCATAT
                      ____________________________________________________________
consensus CTTACTTTGAATTCCAGTTTCTTTAATGATAGATAGATTTAGAAATGGAAATAGGCATAT