Contig 008425:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023P15Sequence633008425 (2)ref|XP_010519984.1|177PREDICTED: uncharacterized protein LOC104799264 [Tarenaya hassleriana]
JMSF003J17Sequence337022010774008425 (2)ref|XP_009620380.1|239PREDICTED: uncharacterized protein LOC104112225 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003J17+              GACAGAGNTTACACAATTGATTCCATTCATCAAGGGGCAGGATATAATGGTGTAAC
                      ____________________________________________________________
consensus                 GACAGAGNTTACACAATTGATTCCATTCATCAAGGGGCAGGATATAATGGTGTAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+                                                          AAGGTATTCATT
rJMSF003J17+          TAATCCCAAAACACCTGTCAAAATAGGTGATTATTATACCACAACTCCAAGGTATTCATT
                      ____________________________________________________________
consensus             TAATCCCAAAACACCTGTCAAAATAGGTGATTATTATACCACAACTCCAAGGTATTCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          GAACTATACAGATATGGAAGATTCCGGATATGGAGAAGCTGTATGCGATGATTCAAGCAC
rJMSF003J17+          GAACTATACAGATATGGAAGATT-CTGATATGGAGAAGCTGTATGCGAGGATTCAAGCAC
                      ____________________________________________________________
consensus             GAACTATACAGATATGGAAGATTCCTGATATGGAGAAGCTGTATGCGATGATTCAAGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          TTGAGGCTGATAAGGAGTCAATGAGGCAGACAATTATGTCAATGCGGACTGAGAAAGCAC
rJMSF003J17+          TTGAGGCTGATAAGGAGTCAATGAGGCAGACAATTATGTCAATGCGGACTGAGAAAGCAC
                      ____________________________________________________________
consensus             TTGAGGCTGATAAGGAGTCAATGAGGCAGACAATTATGTCAATGCGGACTGAGAAAGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          AGCTGGAATTGCTGAAGGAGATCGCCCAACACTTGTACAAAGACATGTCACCAGCAAGGA
rJMSF003J17+          AGCTGGAATTGCTGAAGGAGATCGCCCAACACTTGTACAAAGACATGTCACCAGCAAGGA
                      ____________________________________________________________
consensus             AGCTGGAATTGCTGAAGGAGATCGCCCAACACTTGTACAAAGACATGTCACCAGCAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          GTGCACCTGTGAGGAAGACCTCTACCAATGGGAGATTTTCATTCTTCTCATTATTCAAGT
rJMSF003J17+          GTGCACCTGTGAGGAAGACCTCTACCAATGGGAGATTTTCATTCTTCTCATTATTCAAGT
                      ____________________________________________________________
consensus             GTGCACCTGTGAGGAAGACCTCTACCAATGGGAGATTTTCATTCTTCTCATTATTCAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          GGATCATACCCTTTGCCTTNTGGAGGAAGAGAACGCGTCGATGCNAGTATGCGTTTGGAA
rJMSF003J17+          GGATCATACCCTTTGCCTTCTGGAGGAAGAGAACGCGTCGATGCAAGTATGCGTTTGGAA
                      ____________________________________________________________
consensus             GGATCATACCCTTTGCCTTCTGGAGGAAGAGAACGCGTCGATGCAAGTATGCGTTTGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          TATCAGGCAACAATCCAGGCTTGCTATTGCTTTTAGACAAGGGACCTCGTGTAGGGCAAT
rJMSF003J17+          TATCAGGCAACAATCCAGGCTTGCTATTGCTTTTAGACAAGGGACCTCGTGTAGGGCAAT
                      ____________________________________________________________
consensus             TATCAGGCAACAATCCAGGCTTGCTATTGCTTTTAGACAAGGGACCTCGTGTAGGGCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          GGAGATGCCTTACAAGCACACAGGTCTGACNGCCAGTTTCTATATCAATGTCTGAGACTC
rJMSF003J17+          GGAGATGCCTTACAAGCACACAGGTCTGAC-GCCAGTTTCTATATCAATGTCTGAGACTT
                      ____________________________________________________________
consensus             GGAGATGCCTTACAAGCACACAGGTCTGACNGCCAGTTTCTATATCAATGTCTGAGACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          GTAATCATGAGTGTGTGTGTGTATGTAGAGTGGATTTTAGTGAAGGCATGGTGGTTGTAG
rJMSF003J17+          GTAATCATGAGTGTGTGTGTGTATGTAGAGTGGATTTTAGTGAAGGCATGGTGGTTGTAG
                      ____________________________________________________________
consensus             GTAATCATGAGTGTGTGTGTGTATGTAGAGTGGATTTTAGTGAAGGCATGGTGGTTGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          GTATTACATTCTTTTATTCGGGATTCCACGCTCTGGAAATTTAGGGTCGTTTTTTTTGCT
rJMSF003J17+          GTATTACATTCTTTTATTCGGGATTCCACGCTCTGGAAATTTAGGGTCGTTTTTTTTGCT
                      ____________________________________________________________
consensus             GTATTACATTCTTTTATTCGGGATTCCACGCTCTGGAAATTTAGGGTCGTTTTTTTTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          TGCTTTTAGCCAGGCTTGAGTTCTGATAGTTTCATTTACTGTACATGGAAAGATTTGTTA
rJMSF003J17+          TGCTTTTAGCCAGGCTTGAGTTCTGATAGTTTCATTTACTGTACATGGAAAGATTTGTTA
                      ____________________________________________________________
consensus             TGCTTTTAGCCAGGCTTGAGTTCTGATAGTTTCATTTACTGTACATGGAAAGATTTGTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023P15+          GTGATTCAAGTGTGATATAAG                                       
rJMSF003J17+          GTGATTCAAGTGTGATATAAGTGGCATTGTTAGCAGTATTGTACAATGTACATAACAATT
                      ____________________________________________________________
consensus             GTGATTCAAGTGTGATATAAGTGGCATTGTTAGCAGTATTGTACAATGTACATAACAATT