| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003F23 | Sequence | 746 | 008424 (7) | ref|XP_006362350.1| | 290 | PREDICTED: uncharacterized protein LOC102594735 [Solanum tuberosum] | |||||
| JMSF003G23 | Sequence | 267 | 008424 (7) | gb|KDO64093.1| | 1e-06 | hypothetical protein CISIN_1g0270582mg, partial [Citrus sinensis] | 771 | 008424 (7) | emb|CDP06389.1| | 4e-102 | unnamed protein product [Coffea canephora] |
| JMSF050L21 | Sequence | 660 | 008424 (7) | emb|CDP06389.1| | 1e-94 | unnamed protein product [Coffea canephora] | 693 | 008424 (7) | ref|XP_006362350.1| | 255 | PREDICTED: uncharacterized protein LOC102594735 [Solanum tuberosum] |
| JMSF050P11 | Sequence | 669 | 008424 (7) | emb|CDP06389.1| | 2e-96 | unnamed protein product [Coffea canephora] | 734 | 008424 (7) | emb|CDP06389.1| | 5e-114 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF003G23- CCATTGTGAACCCTCAA
JMSF050L21- CCATTGTGAACCCTCAA
JMSF050P11- GAGTTCTCTGGACCATTGTGAACCCTCAA
____________________________________________________________
consensus GAGTTCTCTGGACCATTGTGAACCCTCAA
. : . : . : . : . : . :
JMSF003G23- ATACTGCCATTCCTACTACTACTACTCAATCTTCACTTCATCTTCGTCGACGACAGCCAT
JMSF050L21- ATACTGCCATTCCTACTACTACTACTCAATCTTCACTTCATCTTCGTCGACGACAGCCAT
JMSF050P11- ATACTGCCATTCCTACTACTACTACTCAATCTTCACTTCATCTTCGTCGACGACAGCCAT
____________________________________________________________
consensus ATACTGCCATTCCTACTACTACTACTCAATCTTCACTTCATCTTCGTCGACGACAGCCAT
. : . : . : . : . : . :
JMSF003G23- GGCCGGAATCTCCGGCCTCAAGCCGGCCTTCTGCCCCAATCTCTCCGTCGTTTCGTTCAA
JMSF050L21- GGCCGGAATCTCCGGCCTCAAGCCGGCCTTCTGCCCCAATCTCTCCGTCGTTTCGTTCAA
JMSF050P11- GGCCGGAATCTCCGGCCTCAAGCCGGCCTTCTGCCCCAATCTCTCCGTCGTTTCGTTCAA
____________________________________________________________
consensus GGCCGGAATCTCCGGCCTCAAGCCGGCCTTCTGCCCCAATCTCTCCGTCGTTTCGTTCAA
. : . : . : . : . : . :
JMSF003G23- GTCCTCGTCCCTCTCATTTCCATCTATAAAGCTATCTCCTAAAATCTCCTTCCGCTCCAA
JMSF050L21- GTCCTCGTCCCTCTCATTTCCATCTATAAAGCTATCTCCTAAAATCTCCTTCCGCTCCAA
JMSF050P11- GTCCTCGTCCCTCTCATTTCCATCTATAAAGCTATCTCCTAAAATCTCCTTCCGCTCCAA
____________________________________________________________
consensus GTCCTCGTCCCTCTCATTTCCATCTATAAAGCTATCTCCTAAAATCTCCTTCCGCTCCAA
. : . : . : . : . : . :
JMSF003G23- ATTCCCTAGAATATATGCGTTTTCTAGCAATGATATTAAAGTGGGCAGCAACATTGAAGT
JMSF050L21- ATTCCCTAGAATATATGCGTTTTCTAGCAATGATATTAAAGTGGGCAGCAACATTGAAGT
JMSF050P11- ATTCCCTAGAATATATGCGTTTTCTAGCAATGATATTAAAGTGGGCAGCAACATTGAAGT
rJMSF050P11+ TCTAGCAATGATATTAAAGTGGGCAGCAACATTGAAGT
____________________________________________________________
consensus ATTCCCTAGAATATATGCGTTTTCTAGCAATGATATTAAAGTGGGCAGCAACATTGAAGT
. : . : . : . : . : . :
JMSF003G23- GGACGG
JMSF050L21- GGACGGAGCTCCTTGGAGGGTTGTTGAATTTCTACATGTCAAACCTGGCAAAGGAGCTGC
JMSF050P11- GGACGGAGCTCCTTGGAGGGTTGTTGAATTTCTACATGTCAAACCTGGCAAAGGAGCTGC
rJMSF050P11+ GGACGGAGCTCCTTGGAGGGTTGTTGAATTTCTACATGTCAAACCTGGCAAAGGAGCTGC
rJMSF003G23+ TGGAGGGTTGTTGAATTTCTACATGTCAAACCTGGCAAAGGAGCTGC
rJMSF003F23+ CATGTCAANCCTGGCAAAGGAGCTGC
____________________________________________________________
consensus GGACGGAGCTCCTTGGAGGGTTGTTGAATTTCTACATGTCAAACCTGGCAAAGGAGCTGC
. : . : . : . : . : . :
JMSF050L21- ATATGTGAGAACCACATTGCGGAACTATGTCACAGGAAACTCGGTTGAGAAAACTTTCCG
JMSF050P11- ATATGTGAGAACCACATTGCGGAACTATGTCACAGGAAACTCGGTTGAGAAAACTTTCCG
rJMSF050P11+ ATATGTGAGAACCACATTGCGGAACTATGTCACAGGAAACTCGGTTGAGAAAACTTTCCG
rJMSF003G23+ ATATGTGAGAACCACATTGCGGAACTATGTCACAGGAAACTCGGTTGAGAAAACTTTCCG
rJMSF050L21+ ATGTCACAGGAAACTCGGTTGAGAAAACTTTCCG
rJMSF003F23+ ATATGTGAGAACCACATTGCGGAACTATGTCACAGGAAACTCGGTTGAGAAAACTTTCCG
____________________________________________________________
consensus ATATGTGAGAACCACATTGCGGAACTATGTCACAGGAAACTCGGTTGAGAAAACTTTCCG
. : . : . : . : . : . :
JMSF050L21- AGCTGGAAGTAAGATAGAAGCAGCAGATATTTCCAAGGAGACAAAACAGTTCACTTACAA
JMSF050P11- AGCTGGAAGTAAGATAGAAGCAGCAGATATTTCCAAGGAGACAAAACAGTTCACTTACAA
rJMSF050P11+ AGCTGGAAGTAAGATAGAAGCAGCAGATATTTCCAAGGAGACAAAACAGTTCACTTACAA
rJMSF003G23+ AGCTGGAAGTAAGATAGAAGCAGCAGATATTTCCAAGGAGACAAAACAGTTCACTTACAA
rJMSF050L21+ AGCTGGAAGTAAGATAGAAGCAGCAGATATTTCCAAGGAGACAAAACAGTTCACTTACAA
rJMSF003F23+ AGCTGGAAGTAAGATAGAAGCAGCAGATATTTCCAAGGAGACAAAACAGTTCACTTACAA
____________________________________________________________
consensus AGCTGGAAGTAAGATAGAAGCAGCAGATATTTCCAAGGAGACAAAACAGTTCACTTACAA
. : . : . : . : . : . :
JMSF050L21- AGATGGTGCCCAGTTTGTGTTCATGGACCTGAATACGTATGAAGAGTTTCGCCTCAATGC
JMSF050P11- AGATGGTGCCCAGTTTGTGTTCATGGACCTGAATACGTATGAAGAGTTTCGCCTCAATGC
rJMSF050P11+ AGATGGTGCCCAGTTTGTGTTCATGGACCTGAATACGTATGAAGAGTTTCGCCTCAATGC
rJMSF003G23+ AGATGGTGCCCAGTTTGTGTTCATGGACCTGAATACGTATGAAGAGTTTCGCCTCAATGC
rJMSF050L21+ AGATGGTGCCCAGTTTGTGTTCATGGACCTGAATACGTATGAAGAGTTTCGCCTCAATGC
rJMSF003F23+ AGATGGTGCCCAGTTTGTGTTCATGGACCTGAATACGTATGAAGAGTTTCGCCTCAATGC
____________________________________________________________
consensus AGATGGTGCCCAGTTTGTGTTCATGGACCTGAATACGTATGAAGAGTTTCGCCTCAATGC
. : . : . : . : . : . :
JMSF050L21- ATCAGATGTTGGGGATAAAACAAAGTTTCTGAAGGAGGGCATGGACTGCATTTTGCTTTT
JMSF050P11- ATCAGATGTTGGGGATAAAACAAAGTTTCTGAAGGAGGGCATGGACTGCATTTTGCTTTT
rJMSF050P11+ ATCAGATGTTGGGGATAAAACAAAGTTTCTGAAGGAGGGCATGGACTGCATTTTGCTTTT
rJMSF003G23+ ATCAGATGTTGGGGATAAAACAAAGTTTCTGAAGGAGGGCATGGACTGCATTTTGCTTTT
rJMSF050L21+ ATCAGATGTTGGGGATAAAACAAAGTTTCTGAAGGAGGGCATGGACTGCATTTTGCTTTT
rJMSF003F23+ ATCAGATGTTGGGGATAAAACAAAGTTTCTGAAGGAGGGCATGGACTGCATTTTGCTTTT
____________________________________________________________
consensus ATCAGATGTTGGGGATAAAACAAAGTTTCTGAAGGAGGGCATGGACTGCATTTTGCTTTT
. : . : . : . : . : . :
JMSF050L21- CTGGAATGGAAAAGTTATTGACTTTGAACTCCCAATTACAGTGAAGTTAACAGTAGTTGA
JMSF050P11- CTGGAATGGAAAAGTTATTGACTTTGAACTCCCAATTACAGTGAAGTTAACAGTAGTTGA
rJMSF050P11+ CTGGAATGGAAAAGTTATTGACTTTGAACTCCCAATTACAGTGAAGTTAACAGTAGTTGA
rJMSF003G23+ CTGGAATGGAAAAGTTATTGACTTTGAACTCCCAATTACAGTGAAGTTAACAGTAGTTGA
rJMSF050L21+ CTGGAATGGAAAAGTTATTGACTTTGAACTCCCAATTACAGTGAAGTTAACAGTAGTTGA
rJMSF003F23+ CTGGAATGGAAAAGTTATTGACTTTGAACTCCCAATTACAGTGAAGTTAACAGTAGTTGA
____________________________________________________________
consensus CTGGAATGGAAAAGTTATTGACTTTGAACTCCCAATTACAGTGAAGTTAACAGTAGTTGA
. : . : . : . : . : . :
JMSF050L21- TGTTGATCCTGGTCTTANAGGAGACACAGCCCAAGGTGG
JMSF050P11- TGTTGATCCTGGTCTTAGAGGAGACACAGCCCAAGGTGGA
rJMSF050P11+ TGTTGATCCTGGTCTTAGAGGAGACACAGCCCAAGGTGGATCAAAACCAGCAACCCTTGA
rJMSF003G23+ TGTTGATCCTGGTCTTAGAGGAGACACAGCCCAAGGTGGATCAAAACCAGCAACCCTTGA
rJMSF050L21+ TGTTGATCCTGGTCTTAGAGGAGACACAGCCCAAGGTGGATCAAAACCAGCAACCCTTGA
rJMSF003F23+ TGTTGATCCTGGTCTTAGAGGAGACACAGCCCAAGGTGGATCAAAACCAGCAACCCTTGA
____________________________________________________________
consensus TGTTGATCCTGGTCTTAGAGGAGACACAGCCCAAGGTGGATCAAAACCAGCAACCCTTGA
. : . : . : . : . : . :
rJMSF050P11+ GACCGGTGCTGTTGTTAATGTTCCATTGTTTATAGACAAAGGGGTGGAGATTATGGTGGA
rJMSF003G23+ GACCGGTGCTGTTGTTAATGTTCCATTGTTCATAGACAAAGGGGTGGAGATTATGGTGGA
rJMSF050L21+ GACCGGTGCTGTTGTTAATGTTCCATTGTTCATAGACAAAGGGGTGGAGATTATGGTGGA
rJMSF003F23+ GACCGGTGCTGTTGTTAATGTTCCATTGTTCATAGACAAAGGGGTGGAGATTATGGTGGA
____________________________________________________________
consensus GACCGGTGCTGTTGTTAATGTTCCATTGTTCATAGACAAAGGGGTGGAGATTATGGTGGA
. : . : . : . : . : . :
rJMSF050P11+ TACTAGAACCGGGCAATACATGAGTCGGGCATAGATTGCTCACTGCTGGGGAATAAGTTT
rJMSF003G23+ TACTAGAACCGGGCAATACATGAGTCGGGCATAGATTGCTCACTGCTGGGGAATAAGTTT
rJMSF050L21+ TACTAGAACCGGGCAATACATGAGTCGGGCATAGATTGCTCACTGCTGGGGAATAAGTTT
rJMSF003F23+ TACTAGAACCGGGCAATACATGAGTCGGGCATAGATTGCTCACTGCTGGGGAATAAGTTT
____________________________________________________________
consensus TACTAGAACCGGGCAATACATGAGTCGGGCATAGATTGCTCACTGCTGGGGAATAAGTTT
. : . : . : . : . : . :
rJMSF050P11+ TCATCACCTTACTTATAATTCCCCATATGGATTTTTGAAGCTTCCATCAAAGCCCGATTA
rJMSF003G23+ TCATCACCTTACTTATAATTCCCCATATGGATTTTTGAAGCTTCCATCAAAGCCCGATTA
rJMSF050L21+ TCATCACCTTACTTATAATTCCCCATATGGATTTTTGAAGCTTCCATCAAAGCCCGATTA
rJMSF003F23+ TCATCACCTTACTTATAATTCCCCATATGGATTTTTGAAGCTTCCATCAAAGCCCGATTA
____________________________________________________________
consensus TCATCACCTTACTTATAATTCCCCATATGGATTTTTGAAGCTTCCATCAAAGCCCGATTA
. : . : . : . : . : . :
rJMSF050P11+ CAAATGCAATTTTGTAAATCTATGTATTGCATAATGAGTTGATAGATGTATACATTTGCA
rJMSF003G23+ CAAATGCAATTTTGTAAATCTATGTATTGCATAATGAGTTGATAGATGTATACATTTGCA
rJMSF050L21+ CAAATGCAATTTTGTAAATCTATGTATTGCATAATGAGTTGATAGATGTATACATTTGCA
rJMSF003F23+ CAAATGCAATTTTGTAAATCTATGTATTGCATAATGAGTTGATAGATGTATACATTTGCA
____________________________________________________________
consensus CAAATGCAATTTTGTAAATCTATGTATTGCATAATGAGTTGATAGATGTATACATTTGCA
. : . : . : . : . : . :
rJMSF050P11+ GGCGTTATGAAAACTACATAGAC
rJMSF003G23+ GGCGTTATGAAAACTACATAGACATGGCTTTCAGCCTTCTGTTCTATTACTAATATCACT
rJMSF050L21+ GGCGTTATGAAAACTACATAGACATGGCTTTCAGCCTTCTGTTCTATTACTAATATCACT
rJMSF003F23+ GGCGTTATGAAAACTACATAGACATGGCTTTCAGCCTTCTGTTCTATTACTAATATCACT
____________________________________________________________
consensus GGCGTTATGAAAACTACATAGACATGGCTTTCAGCCTTCTGTTCTATTACTAATATCACT
. : . : . : . : . : . :
rJMSF003G23+ GGGTATGCAGAAGCTTTTCTTGTATCTTTAATTTGCATTTCATGAACCATATGAAATCT
rJMSF050L21+ GGGTATGCAGAAGCTTTTCTTGTATCTTTAATTTGCATTTCATGAACCATATGAAATCT
rJMSF003F23+ GGGTATGCAGAAGCTTTTCTTGTATCTTTAATTTGCATTTCATGAACCATATGAAATCTG
____________________________________________________________
consensus GGGTATGCAGAAGCTTTTCTTGTATCTTTAATTTGCATTTCATGAACCATATGAAATCTG