| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031J22 | Sequence | 562 | 011644 (2) | ref|XP_009769198.1| | 2e-43 | PREDICTED: probable protein phosphatase 2C 51 isoform X2 [Nicotiana sylvestris] | 772 | 008415 (3) | ref|XP_009612814.1| | 8e-86 | PREDICTED: probable protein phosphatase 2C 51 isoform X2 [Nicotiana tomentosifo |
| JMFF048I15 | Sequence | 567 | 011644 (2) | ref|XP_009769198.1| | 3e-37 | PREDICTED: probable protein phosphatase 2C 51 isoform X2 [Nicotiana sylvestris] | 513 | 008415 (3) | ref|XP_009612816.1| | 1e-40 | PREDICTED: probable protein phosphatase 2C 51 isoform X4 [Nicotiana tomentosifo |
| JMSF001N10 | Sequence | 285 | 015647 | ref|XP_009615025.1| | 1e-24 | PREDICTED: uncharacterized protein LOC104107821 isoform X6 [Nicotiana tomentosi | 712 | 008415 (3) | gb|KDP21400.1| | 2e-72 | hypothetical protein JCGZ_21871 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
rJMFF031J22+ ACAATCCAAGATATAGATTCAGAATTTTCTCAGGAAGCCAT
____________________________________________________________
consensus ACAATCCAAGATATAGATTCAGAATTTTCTCAGGAAGCCAT
. : . : . : . : . : . :
rJMFF031J22+ GAACCATGGCTATATTTCGGGATCAACAGCAACAGTTGTTGTTTGGGTGAACAGACAGAT
____________________________________________________________
consensus GAACCATGGCTATATTTCGGGATCAACAGCAACAGTTGTTGTTTGGGTGAACAGACAGAT
. : . : . : . : . : . :
rJMFF031J22+ TTTAGTAGGATCCCTCGGTGATTCAAAAGCACTTCTATGTTCAAGAAGAAATCATCCCGA
____________________________________________________________
consensus TTTAGTAGGATCCCTCGGTGATTCAAAAGCACTTCTATGTTCAAGAAGAAATCATCCCGA
. : . : . : . : . : . :
rJMFF031J22+ TGCTGAAGGTGAACTGGAGTCAAAACTTTATGCTGAGGAACTAACAAGGGATCACCATCC
____________________________________________________________
consensus TGCTGAAGGTGAACTGGAGTCAAAACTTTATGCTGAGGAACTAACAAGGGATCACCATCC
. : . : . : . : . : . :
rJMFF048I15+ GAAGATGAAAAAGCTCGAATAGAAGCAGCTGGGGGAGTTATTCGTGTATGGGG
rJMFF031J22+ AGATAGAGAAGATGAAAAAGCTCGAATAGAAGCAGCTGGGGGAGTTATTCGTGTATGGGG
____________________________________________________________
consensus AGATAGAGAAGATGAAAAAGCTCGAATAGAAGCAGCTGGGGGAGTTATTCGTGTATGGGG
. : . : . : . : . : . :
rJMFF048I15+ TGTTCCTCGTGTCAATGGCATATTGGCTGTCACTCGATCTATTGGTGGTATATACTTGAA
rJMFF031J22+ TGTTCCTCGTGTCAATGGCATATTGGCTGTCACTCGATCTATTGGTGGTATATACTTGAA
____________________________________________________________
consensus TGTTCCTCGTGTCAATGGCATATTGGCTGTCACTCGATCTATTGGTGGTATATACTTGAA
. : . : . : . : . : . :
rJMFF048I15+ AAGATATGGTGTTATTGCTGAACCGGAAATAAGTTGGCGAAATCTGACCAGCAAGGACTA
rJMFF031J22+ AAGATATGGTGTTATTGCTGAACCGGAAATAAGTTGGCGAAATCTGACCAGCAAGGACTA
____________________________________________________________
consensus AAGATATGGTGTTATTGCTGAACCGGAAATAAGTTGGCGAAATCTGACCAGCAAGGACTA
. : . : . : . : . : . :
rJMFF048I15+ CTACATAGTCATCGGAACTGATGGCGTATTTGAGACTATGGCTCCACAGAGCGTGTGCAA
rJMFF031J22+ CTACATAGTCATCGGAACTGATGGCGTATTTGAGACTATGGCTCCACAGAGCGTGTGCAA
____________________________________________________________
consensus CTACATAGTCATCGGAACTGATGGCGTATTTGAGACTATGGCTCCACAGAGCGTGTGCAA
. : . : . : . : . : . :
rJMFF048I15+ TATACTACAGGCTCAAGAAAAGGAGGCCCCCAACAACTCTCCTTTACGTTCATTATCCTC
rJMFF031J22+ TATACTACAGGCTCAAGAAAAGGAGGCCCCCAACAACTCTCCTTTACGTTCATTATCCTC
____________________________________________________________
consensus TATACTACAGGCTCAAGAAAAGGAGGCCCCCAACAACTCTCCTTTACGTTCATTATCCTC
. : . : . : . : . : . :
rJMFF048I15+ CCTAGCAGATTGCATAGTCCACAAGGCATTTGATGAGGGGAGCATGGACAACCTGTCGGT
rJMFF031J22+ CCTAGCAGATTGCATAGTCCACAAGGCATTTGATGAGGGGAGCATGGACAACCTGTCGGT
____________________________________________________________
consensus CCTAGCAGATTGCATAGTCCACAAGGCATTTGATGAGGGGAGCATGGACAACCTGTCGGT
. : . : . : . : . : . :
rJMFF048I15+ TATTGTGATTCCAATAAAGAAGAATGCAGCACAGTGATAGTAGGTAGGTCTAATCTATTA
rJMFF031J22+ TATTGTGATTCCAATAAAGAAGAATGCAGCACAGTGATAGTAGGTAGGTCTAATCTATTA
____________________________________________________________
consensus TATTGTGATTCCAATAAAGAAGAATGCAGCACAGTGATAGTAGGTAGGTCTAATCTATTA
. : . : . : . : . : . :
rJMFF048I15+ ATTCTTTTGCTGTAGCGCTACAGATGGAATGGCCAGTTCTCTATAATTCTGTATCTTGGA
rJMFF031J22+ ATTCTTTTGCTGTAGCGCTACAGATGGAATGGCCAGTTCTCTATAATTCTGTATCTTGGA
____________________________________________________________
consensus ATTCTTTTGCTGTAGCGCTACAGATGGAATGGCCAGTTCTCTATAATTCTGTATCTTGGA
. : . : . : . : . : . :
rJMFF048I15+ ATGCATAGTACAATACAAAAATGCTTCTGTTGTCGAGT
rJMFF031J22+ ATGCATAGTACAATACAAAAATGCTTCTGTTGTCGAGTGTAAGATGTTTACTGTTGCATT
rJMSF001N10- TACAATACAAAAATGCTTCTGTTGTCGAGTGTAAGATGTTTACTGTTGCATT
____________________________________________________________
consensus ATGCATAGTACAATACAAAAATGCTTCTGTTGTCGAGTGTAAGATGTTTACTGTTGCATT
. : . : . : . : . : . :
rJMFF031J22+ TTATTTTTTTC
rJMSF001N10- TTATTTTTTTCTTTCTATTTCTTTTTTAATCAATGGAATTGCATACTTACAGTGCCAACG
____________________________________________________________
consensus TTATTTTTTTCTTTCTATTTCTTTTTTAATCAATGGAATTGCATACTTACAGTGCCAACG
. : . : . : . : . : . :
rJMSF001N10- TTCTCATACAACCACTTTGGTAACTACTCCTGCCTGCTTGAGGAGCAAACATCCCAACTC
____________________________________________________________
consensus TTCTCATACAACCACTTTGGTAACTACTCCTGCCTGCTTGAGGAGCAAACATCCCAACTC
. : . : . : . : . : . :
rJMSF001N10- AAAACTCGCAGTCTGCTCGACACATTTCTTCAAAGCATGTGGAACTGAGCATAGACAGAG
____________________________________________________________
consensus AAAACTCGCAGTCTGCTCGACACATTTCTTCAAAGCATGTGGAACTGAGCATAGACAGAG
. : . : . : . : . : . :
rJMSF001N10- GCAAGTTAAACCTTTCCATCAGTTTGATTGTGTGCATGTTGTGAAAAATATGGATGCTTC
____________________________________________________________
consensus GCAAGTTAAACCTTTCCATCAGTTTGATTGTGTGCATGTTGTGAAAAATATGGATGCTTC
. : . : . : . : . : . :
rJMSF001N10- AGAGCTTCATCAACACTCAGTCGATCCTCAGGATTCCAGTGTAGCAGTTGGCGAACTAAT
____________________________________________________________
consensus AGAGCTTCATCAACACTCAGTCGATCCTCAGGATTCCAGTGTAGCAGTTGGCGAACTAAT
. : . : . : . : . : . :
rJMSF001N10- CGCAAAGCCCATATATTCGGAAACCCTATTTTTAGAGGATCTCTGTTTCTAATTTGATGC
____________________________________________________________
consensus CGCAAAGCCCATATATTCGGAAACCCTATTTTTAGAGGATCTCTGTTTCTAATTTGATGC
. : . : . : . : . : . :
rJMSF001N10- AAAAAGAACTCTTCAGAGCATTTCCATGGAGCCGGTGAACCTGAGTCCGGGTAACGCGGC
____________________________________________________________
consensus AAAAAGAACTCTTCAGAGCATTTCCATGGAGCCGGTGAACCTGAGTCCGGGTAACGCGGC
. : . : . : . : . : . :
rJMSF001N10- TTTGTTGAACTCCCAGGGATCAGGATACATAATTCCATGAAAGCTCTTAGTTTGAAGGCA
____________________________________________________________
consensus TTTGTTGAACTCCCAGGGATCAGGATACATAATTCCATGAAAGCTCTTAGTTTGAAGGCA
. : . : . : . : . : . :
rJMSF001N10- AGCTCCTTTATACTTTCATTCCACCCTTCTAGATGCTGATCTAAAAGAGCACGTGTCCTA
____________________________________________________________
consensus AGCTCCTTTATACTTTCATTCCACCCTTCTAGATGCTGATCTAAAAGAGCACGTGTCCTA
. : . : . : . : . : . :
rJMSF001N10- GAACTTATCTGGAACACATTTGGTGATCCTAATATTAGTTCCAACATCACAACCCCAACA
____________________________________________________________
consensus GAACTTATCTGGAACACATTTGGTGATCCTAATATTAGTTCCAACATCACAACCCCAACA
. : . : . : . : . : . :
rJMSF001N10- CTCCACATATCGTACTTAAGACTTGCTGAAGTTGGCCCCTGGTACCAGCTGGCATTAAGA
____________________________________________________________
consensus CTCCACATATCGTACTTAAGACTTGCTGAAGTTGGCCCCTGGTACCAGCTGGCATTAAGA