Contig 008411:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001H04-                            AACACACTACATGTTTGATACATACATACACATATATATATG
                      ____________________________________________________________
consensus                               AACACACTACATGTTTGATACATACATACACATATATATATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001H04-          TAGCAACCAAATACAAACAACGTAACATGAGAGGATCGGAGCATCCCAGCTACCAAAGCA
                      ____________________________________________________________
consensus             TAGCAACCAAATACAAACAACGTAACATGAGAGGATCGGAGCATCCCAGCTACCAAAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001H04-          TGTTTGGATTATATTATTTGGGACATTTATTTAGCTATATATATAAACACTGATCGAATT
                      ____________________________________________________________
consensus             TGTTTGGATTATATTATTTGGGACATTTATTTAGCTATATATATAAACACTGATCGAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001H04-          GAAGTTGAAGCAAGCAATGTTGGTTATTTATTGTAGCAGCTGCAAGGTCTGAAGCAGCTG
                      ____________________________________________________________
consensus             GAAGTTGAAGCAAGCAATGTTGGTTATTTATTGTAGCAGCTGCAAGGTCTGAAGCAGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001H04-          CAGATGCGCCTTGCCTGACCGGTAATGGTGCAATCCCCGGAGGTAAACCCCTCTGTATCC
                      ____________________________________________________________
consensus             CAGATGCGCCTTGCCTGACCGGTAATGGTGCAATCCCCGGAGGTAAACCCCTCTGTATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF001H04+                AATTCTATTGCAGTTGTTGCGGGAATTTTGGTTGATTAAAAGACAATTCCCCCTG
rJMSF001H04-          CTGCAAATTCTATTGCAGTTGTTGCGGGAATTTTGGTTGATTAAAAGACAATTCCCCCTG
                      ____________________________________________________________
consensus             CTGCAAATTCTATTGCAGTTGTTGCGGGAATTTTGGTTGATTAAAAGACAATTCCCCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF001H04+           TAGTGTTCACTCTGCGACGTGCACATTCTGGTACCGGCAGCCATTGTTCCCATTCCTGCA
rJMSF001H04-          TAGTGTTCACTCTGCGACGTGCACATTCTGGTACCGGCAGCCATTGTTCCCATTCCTGCA
                      ____________________________________________________________
consensus             TAGTGTTCACTCTGCGACGTGCACATTCTGGTACCGGCAGCCATTGTTCCCATTCCTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF001H04+           GAATTATATCAGATCCGATAATTAGCACTCACATCAATCATCAAAAAATAATAATAATAA
rJMSF001H04-          GAATTATATCAGATCCGATAATTAGCACTCACATCAATCATCAAAAAATAATAATAATAA
                      ____________________________________________________________
consensus             GAATTATATCAGATCCGATAATTAGCACTCACATCAATCATCAAAAAATAATAATAATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF001H04+           TGGAGAAAGTCAGAAAGGGAGAGAGCAAACCAGAGGCCATGAAGAGCATCACCAAGAGTG
rJMSF001H04-          TGGAGAAAGTCAGAAAGGGAGAGAGCAAACCAGAGGCCATGAAGAGCATCACCAAGAGTG
                      ____________________________________________________________
consensus             TGGAGAAAGTCAGAAAGGGAGAGAGCAAACCAGAGGCCATGAAGAGCATCACCAAGAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF001H04+           AAGCAATTGCAACCAAACGAACAGAAGAAGAAGAAGAAGAAGAAGCCATCGTTAGTAGTT
rJMSF001H04-          AAGCAATTGCAACCAAACGAACAGAAGAAGAANAANAANAAGAAGCCATCGTTAGTAGTT
                      ____________________________________________________________
consensus             AAGCAATTGCAACCAAACGAACAGAAGAAGAAGAAGAAGAAGAAGCCATCGTTAGTAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF001H04+           GAGAACAAAAGAGGGTTTTTGCTTATTTAGGAGAAATAATGGGAATGCTGTGTGTCC   
rJMSF001H04-          GAGAACAAAAGAGGGTTTTTGCTTATTTAGGAGAAATAATGGGAATGCTGTGTGTCCCCA
                      ____________________________________________________________
consensus             GAGAACAAAAGAGGGTTTTTGCTTATTTAGGAGAAATAATGGGAATGCTGTGTGTCCCCA