clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF019H22 | Sequence | 576 | 011660 (12) | ref|XP_009622831.1| | 2e-58 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis] | 718 | 008405 (10) | ref|XP_006360726.1| | 1e-70 | PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum] |
JMFF029E11 | Sequence | 498 | 011660 (12) | ref|XP_009622831.1| | 2e-47 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis] | 685 | 008405 (10) | gb|AFU52665.1| | 1e-35 | putative PD beta-1,3-glucanase 1 [Solanum tuberosum] |
JMFF035K09 | Sequence | 485 | 011660 (12) | ref|XP_009622831.1| | 2e-44 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis] | 665 | 008405 (10) | ref|XP_006360726.1| | 2e-60 | PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum] |
JMFF036P21 | Sequence | 431 | 011660 (12) | ref|XP_009622831.1| | 1e-41 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis] | 663 | 008405 (10) | ref|XP_006360726.1| | 2e-62 | PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum] |
JMFF051F06 | Sequence | 495 | 011660 (12) | ref|XP_009622831.1| | 1e-45 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis] | 462 | 008405 (10) | |||
JMFN044B11 | Sequence | 523 | 008405 (10) | ref|XP_009772777.1| | 6e-26 | PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Nicotiana sylvestris] | |||||
JMSF003G07 | Sequence | 381 | 011660 (12) | ref|XP_009622831.1| | 7e-28 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis] | 742 | 008405 (10) | ref|XP_006360726.1| | 6e-60 | PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum] |
JMSF015A24 | Sequence | 654 | 008405 (10) | ref|XP_004252615.1| | 1e-44 | PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum lycopersicum] | |||||
JMSF017E23 | Sequence | 447 | 011660 (12) | ref|XP_009622831.1| | 5e-46 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis] | 745 | 008405 (10) | ref|XP_006360726.1| | 8e-61 | PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum] |
JMSF046L04 | Sequence | 752 | 011660 (12) | ref|XP_009622831.1| | 1e-98 | PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis] | 719 | 008405 (10) | ref|XP_006360726.1| | 9e-68 | PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF019H22+ TTCGTGCTGTTCCAGCAG
____________________________________________________________
consensus TTCGTGCTGTTCCAGCAG
. : . : . : . : . : . :
rJMFF035K09+ TACGACAACATGCTGTTCGCTCAA
rJMFF036P21+ TACGACAACATGCTGTTCGCTCAA
rJMFF019H22+ AATCCGGGGATAAATGACCCTGTCTCCGGCCTTCACTACGACAACATGCTGTTCGCTCAA
rJMSF017E23+ TACGACAACATGCTGTTCGCTCAA
rJMSF015A24+ TCGCTCAA
rJMSF003G07+ ACGACAACATGCTGTTCGCTCAA
____________________________________________________________
consensus AATCCGGGGATAAATGACCCTGTCTCCGGCCTTCACTACGACAACATGCTGTTCGCTCAA
. : . : . : . : . : . :
rJMFF035K09+ ATCGACGCCGTTCATTGGGCGTTGTCTTCGCTAGGGTATAAGAACGTGTGCGTGCAGATC
rJMFF036P21+ ATCGACGCCGTTCATTGGGCGTTGTCTTCGCTAGGGTATAAGAACGTGTGCGTGCAGATC
rJMFF019H22+ ATCGACGCCGTTCATTGGGCGTTGTCTTCGCTAGGGTATAAGAACGTGTGCGTGCAGATC
rJMSF017E23+ ATCGACGCCGTTCATTGGGCGTTGTCTTCGCTAGGGTATAAGAACGTGTGCGTGCAGATC
rJMSF046L04+ TTCGCTAGGGTATAAGAACGTGTGCGTGCAGATC
rJMSF015A24+ ATAGACGCCGTTCATTGGGCNTTGTNTTCGCTAGGGTATAAGAATGTGTGNGTNCAGATC
rJMSF003G07+ ATCGACGCCGTTCATTGGGCGTTGTCTTCGCTAGGGTATAAGAACGTGTGCGTGCAGATC
rJMFF029E11+ TATAAGAACGTGTGCGTGCAGATC
____________________________________________________________
consensus ATCGACGCCGTTCATTGGGCGTTGTCTTCGCTAGGGTATAAGAACGTGTGCGTGCAGATC
. : . : . : . : . : . :
rJMFF035K09+ TCGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCAGGTTGGAGAAC
rJMFF036P21+ TCGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCACGTTGGAGAAC
rJMFF019H22+ TCGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCACGTTGGAGAAC
rJMSF017E23+ TCGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCACGTTGGAGAAC
rJMSF046L04+ TCGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCACGTTGGAGAAC
rJMSF015A24+ TNGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCANGTTGGAGAAC
rJMSF003G07+ TCGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCACGTTGGAGAAC
rJMFF029E11+ TCGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCACGTTGGAGAAC
____________________________________________________________
consensus TCGGAGTCGGGTTGGCCGTCCAAGGGGGACGCCGACGAGCCGGGAGCCACGTTGGAGAAC
. : . : . : . : . : . :
rJMFF035K09+ GCTAGGAAGTACAACTGCAACCT-CCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
rJMFF036P21+ GCTAGGAAGTACAACTGCAACCT-CCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
rJMFF019H22+ GCTAGGAAGTACAACTGCAACCT-CCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
rJMSF017E23+ GCTAGGAAGTACAACTGCAACCT-CCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
rJMSF046L04+ GCTAGGAAGTACAACTGCAACCT-CCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
JMFN044B11- TGCAACCT-CCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
rJMSF015A24+ GCTAGGAAGTACAACTNCAACCT-CNTGAAGTTCATNGCCCAGAAGAAAGGAACTCCANT
rJMSF003G07+ GCTAGGAAGTACAACTGCAACCT-CCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
rJMFF029E11+ GCTAGGAAGTACAACTGCAACCTCCCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
____________________________________________________________
consensus GCTAGGAAGTACAACTGCAACCT-CCTGAAGCTCATTGCCCAGAAGAAAGGAACTCCATT
. : . : . : . : . : . :
rJMFF035K09+ GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
rJMFF036P21+ GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
rJMFF019H22+ GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
rJMSF017E23+ GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
rJMSF046L04+ GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
JMFN044B11- GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
rJMSF015A24+ GAAGCCCACCAACAATTTGAACATNTTCGTNTATGCGCTGTTCAATGAGAACATGAAGCC
rJMSF003G07+ GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
rJMFF029E11+ GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
____________________________________________________________
consensus GAAGCCCACCAACAATTTGAACATTTTCGTCTTTGCGCTGTTCAATGAGAACATGAAGCC
. : . : . : . : . : . :
rJMFF035K09+ CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGAACGCCGGCATATCC
rJMFF036P21+ CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGGACGCCGGCATATCC
rJMFF019H22+ CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGAACGCCGGCATATCC
rJMSF017E23+ CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGAACGCCGGCATATCC
rJMSF046L04+ CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGAACGCCGGCATATCC
JMFN044B11- CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGAACGCCGGCATATCC
rJMSF015A24+ CGGGCNCACCTCGGAGCGCAANTACGGCCTCTTCAACCCCGNCGGAACGCNGGCATATCC
rJMSF003G07+ CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGAACGCCGGCATATCC
rJMFF029E11+ CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGAACGCCGGCATATCC
____________________________________________________________
consensus CGGGCCCACCTCGGAGCGCAACTACGGCCTCTTCAACCCCGACGGAACGCCGGCATATCC
. : . : . : . : . : . :
rJMFF035K09+ ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
rJMFF036P21+ ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
rJMFF019H22+ ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
rJMSF017E23+ ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
rJMSF046L04+ ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
JMFN044B11- ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
rJMSF015A24+ ACTTGGCTTTTCCGTCACCACCAACACTAACTNCAATTCAACCATTTCTGGACCCCCNTC
rJMSF003G07+ ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
rJMFF029E11+ ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
____________________________________________________________
consensus ACTTGGCTTTTCCGTCACCACCAACACTAACTCCAATTCAACCATTTCTGGACCCCCCTC
. : . : . : . : . : . :
rJMFF035K09+ CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
rJMFF036P21+ CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
rJMFF019H22+ CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
rJMSF017E23+ CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
rJMSF046L04+ CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
JMFN044B11- CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
rJMSF015A24+ NGGCTNTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTNATCTGTCCAT
rJMSF003G07+ CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
rJMFF029E11+ CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
rJMFF051F06+ ATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
____________________________________________________________
consensus CGGCTTTCCGCCGTCGATATCATCTCCCCCGGGGACTCCCTCCGACGGTTATCTGTCCAT
. : . : . : . : . : . :
rJMFF035K09+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
rJMFF036P21+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
rJMFF019H22+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
rJMSF017E23+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
rJMSF046L04+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
JMFN044B11- TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
rJMSF015A24+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
rJMSF003G07+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
rJMFF029E11+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
rJMFF051F06+ TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
____________________________________________________________
consensus TACGTCCGATGCGGTGAGAGCTCCTCATTTATGCAGCAAATGGCTGGGTTTCATAATGTT
. : . : . : . : . : . :
rJMFF035K09+ GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
rJMFF036P21+ GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
rJMFF019H22+ GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
rJMSF017E23+ GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
rJMSF046L04+ GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
JMFN044B11- GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
rJMSF015A24+ GGGCTTCCTANTAGATACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
rJMSF003G07+ GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
rJMFF029E11+ GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
rJMFF051F06+ GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
____________________________________________________________
consensus GGGCTTCCTACTA-CTACTCAACAAATTTAAGTAGAAATTGTTGTGTTGGAGAAATGTTG
. : . : . : . : . : . :
rJMFF035K09+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
rJMFF036P21+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
rJMFF019H22+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
rJMSF017E23+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
rJMSF046L04+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTANCTGTGCTCTGTGCATCC
JMFN044B11- TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
rJMSF015A24+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
rJMSF003G07+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
rJMFF029E11+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
rJMFF051F06+ TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
____________________________________________________________
consensus TGATAGAACCTAGCTACAATAATTCTGTTACTCTGGCTTGTA-CTGTGCTCTGTGCATCC
. : . : . : . : . : . :
rJMFF035K09+ TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGTTTTA
rJMFF036P21+ TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGT
rJMFF019H22+ TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGTTTTA
rJMSF017E23+ TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGTTTTATGAACATATTCTTTTGT
rJMSF046L04+ TCGACTCATACATCCTTGGAATCAGTCAGATCC
JMFN044B11- TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGTTTTATGAACATATTCTTTTGT
rJMSF015A24+ TCGANTCATACATCC-TGGAATCAGTCAGATCCTGGG
rJMSF003G07+ TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGTTTTATGAACATATTCTTTTGT
rJMFF029E11+ TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGTTTTATGAACATATTCTTTTGT
rJMFF051F06+ TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGTTTTATGAACATATTCTTTTGT
____________________________________________________________
consensus TCGACTCATACATCCTTGGAATCAGTCAGATCCTGGGGTTTTATGAACATATTCTTTTGT
. : . : . : . : . : . :
rJMSF017E23+ TATTGCTTCTGTTTTGGATTGATTCAGGGAGTAAGTACTGTACCTACCATTTATAAGCTT
JMFN044B11- T
rJMSF003G07+ TATTGCTTCTGTTTTGGATTGATTCAGGGAGTAAGTACTGTACCTACCATTTATAAGCTT
rJMFF029E11+ TATTGCTTCTGTTTTGGATTGATTCAGGGAGTAAGTACTGTACCTACCATTTATAAGCTT
rJMFF051F06+ TATTGCTTCTGTTTTGGATTGATTCAGGGAGTAAGTACTGTACCTACCATTTATAAGCTT
____________________________________________________________
consensus TATTGCTTCTGTTTTGGATTGATTCAGGGAGTAAGTACTGTACCTACCATTTATAAGCTT
. : . : . : . : . : . :
rJMSF017E23+ AT
rJMSF003G07+ AT
rJMFF029E11+ AT
rJMFF051F06+ ATTGATTGTAGGCTATTCTTTATGAAAAATATTATGTAGGTGTTTGGTAAATAACTGTTA
____________________________________________________________
consensus ATTGATTGTAGGCTATTCTTTATGAAAAATATTATGTAGGTGTTTGGTAAATAACTGTTA
. : . : . : . : . : . :
rJMFF051F06+ GCTGATTGGATTAGTGAATTTGACTAGTTGATAGCAAAAAAAAAAAAAAACTCTCCAGGT
____________________________________________________________
consensus GCTGATTGGATTAGTGAATTTGACTAGTTGATAGCAAAAAAAAAAAAAAACTCTCCAGGT