| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022G20 | Sequence | 535 | 008395 (10) | ref|XP_010526375.1| | 132 | PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01 | 765 | 008395 (10) | ref|XP_010526375.1| | 150 | PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01 |
| JMFF050M12 | Sequence | 589 | 008395 (10) | ref|XP_010526375.1| | 153 | PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01 | 273 | 008395 (10) | |||
| JMSF002D18 | Sequence | 329 | 008395 (10) | ref|XP_010323346.1| | 2e-13 | PREDICTED: uncharacterized protein LOC101260152 isoform X2 [Solanum lycopersicu | 774 | 008395 (10) | ref|XP_010526375.1| | 203 | PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01 |
| JMSF016P24 | Sequence | 271 | 008395 (10) | ref|XP_010323346.1| | 3e-05 | PREDICTED: uncharacterized protein LOC101260152 isoform X2 [Solanum lycopersicu | 766 | 008395 (10) | ref|XP_010526375.1| | 199 | PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01 |
| JMSF017P24 | Sequence | 217 | 008395 (10) | 672 | 008395 (10) | ref|XP_010526375.1| | 166 | PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01 | |||
This contig is upended
. : . : . : . : . : . :
JMSF002D18- GAGTGAGAAT
____________________________________________________________
consensus GAGTGAGAAT
. : . : . : . : . : . :
JMSF017P24- GAAGACAGAGCTCAGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
JMSF016P24- GAAGACAGAGCTCAGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
JMSF002D18- TGAAGACAGAGCTCAGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
JMFF022G20- AGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
JMFF050M12- GGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
____________________________________________________________
consensus TGAAGACAGAGCTCAGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
. : . : . : . : . : . :
JMSF017P24- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
JMSF016P24- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
JMSF002D18- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
JMFF022G20- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
JMFF050M12- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
____________________________________________________________
consensus GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
. : . : . : . : . : . :
JMSF017P24- NATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
JMSF016P24- GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
JMSF002D18- GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
JMFF022G20- GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
JMFF050M12- GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
____________________________________________________________
consensus GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
. : . : . : . : . : . :
JMSF017P24- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACA
JMSF016P24- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
JMSF002D18- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
JMFF022G20- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
JMFF050M12- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
____________________________________________________________
consensus GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
. : . : . : . : . : . :
JMSF016P24- TGGCCCTGGTCTTTATGCAGTTTCAGTT
JMSF002D18- TGGCCCTGGTCTTTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
JMFF022G20- TGGCCCTGGTCTTTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
JMFF050M12- TGGCCCTGGTCTTTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
rJMSF016P24+ TTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
rJMSF002D18+ TCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
____________________________________________________________
consensus TGGCCCTGGTCTTTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
. : . : . : . : . : . :
JMSF002D18- ACCCAACACACTTATCCCT
JMFF022G20- ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCACCGAACGTAGTTCTTCTGAGCA
JMFF050M12- ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCACCGAACGTAGTTCTTCTGAGCA
rJMSF016P24+ ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCAC---------TTCTTCTGAGCA
rJMSF017P24+ TGAGCA
rJMSF002D18+ ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCACCGAACGTAGTTCTTCTGAGCA
rJMFF022G20+ TGAGCA
____________________________________________________________
consensus ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCACCGAACGTAGTTCTTCTGAGCA
. : . : . : . : . : . :
JMFF022G20- TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
JMFF050M12- TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
rJMSF016P24+ TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
rJMSF017P24+ TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
rJMSF002D18+ TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
rJMFF022G20+ TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
____________________________________________________________
consensus TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
. : . : . : . : . : . :
JMFF022G20- CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
JMFF050M12- CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
rJMSF016P24+ CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
rJMSF017P24+ CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
rJMSF002D18+ CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
rJMFF022G20+ CCCTGAACNTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
____________________________________________________________
consensus CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
. : . : . : . : . : . :
JMFF022G20- CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
JMFF050M12- CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
rJMSF016P24+ CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
rJMSF017P24+ CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
rJMSF002D18+ CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
rJMFF022G20+ CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
____________________________________________________________
consensus CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
. : . : . : . : . : . :
JMFF022G20- AAGACTTGT
JMFF050M12- AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATAC
rJMSF016P24+ AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
rJMSF017P24+ AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
rJMSF002D18+ AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
rJMFF022G20+ AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
____________________________________________________________
consensus AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
. : . : . : . : . : . :
rJMSF016P24+ TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
rJMSF017P24+ TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
rJMSF002D18+ TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
rJMFF022G20+ TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
____________________________________________________________
consensus TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
. : . : . : . : . : . :
rJMSF016P24+ TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
rJMSF017P24+ TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
rJMSF002D18+ TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
rJMFF022G20+ TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
____________________________________________________________
consensus TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
. : . : . : . : . : . :
rJMSF016P24+ TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
rJMSF017P24+ TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
rJMSF002D18+ TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
rJMFF022G20+ TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
____________________________________________________________
consensus TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
. : . : . : . : . : . :
rJMSF016P24+ CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
rJMSF017P24+ CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
rJMSF002D18+ CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
rJMFF022G20+ CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
____________________________________________________________
consensus CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
. : . : . : . : . : . :
rJMSF016P24+ CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
rJMSF017P24+ CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
rJMSF002D18+ CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
rJMFF022G20+ CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
rJMFF050M12+ GATCCAAATGATTGTATTTGGGTTCATTACATC
____________________________________________________________
consensus CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
. : . : . : . : . : . :
rJMSF016P24+ ACTGCTTCCTGGGTTTCACAACATAGATTAGATTGATTAGAATTAACTGTACACCAAGTA
rJMSF017P24+ ACTGCTTCCTGGGTTTCACAACATAGANTAGATTGATTAGAATTAACTGTACACCAAGTA
rJMSF002D18+ ACTGCTTCCTGGGTTTCACAACATAGATTAGATTGATTAGAATTAACTGTACACCAAGTA
rJMFF022G20+ ACTGCTTCCTGGGTTTCACAACATAGATTAGATTGATTAGAATTAACTGTACACCAAGTA
rJMFF050M12+ ACTGCTTCCTGGGTTTCCCAACATAGATTAGATTGATTAGAATTAACTGTACCCCAAGTA
____________________________________________________________
consensus ACTGCTTCCTGGGTTTCACAACATAGATTAGATTGATTAGAATTAACTGTACACCAAGTA
. : . : . : . : . : . :
rJMSF016P24+ GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
rJMSF017P24+ GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
rJMSF002D18+ GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
rJMFF022G20+ GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
rJMFF050M12+ GTCATATGATCATTCCGGATTTATAAGGAGGATTTTTGTTGTTTCTATACATCTTAAAGG
____________________________________________________________
consensus GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
. : . : . : . : . : . :
rJMSF016P24+ GAGCTT
rJMSF017P24+ GAGCTT
rJMSF002D18+ GAGCTTCTACTGCCCT
rJMFF022G20+ GAGCTTCTACTGCCCTATTCCCAGTTCCCAAATAGTAAATAATTGTGTTCGAGTATTATT
rJMFF050M12+ GAGGTTTTACTGCCCTATTCCCAGTTCCCAAATAGTAAATAATTGTGTTGGAGTATTATT
____________________________________________________________
consensus GAGCTTCTACTGCCCTATTCCCAGTTCCCAAATAGTAAATAATTGTGTTGGAGTATTATT
. : . : . : . : . : . :
rJMFF022G20+ TTGACACTGTAGAAAATCTTAAACTTTTAAT
rJMFF050M12+ TTGACCCTGTAGAAAATTTTAAACTTTTAATGCCAGAAGTTGTGGTGGATTTTGCTTTGT
____________________________________________________________
consensus TTGACCCTGTAGAAAATTTTAAACTTTTAATGCCAGAAGTTGTGGTGGATTTTGCTTTGT