Contig 008395:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022G20Sequence535008395 (10)ref|XP_010526375.1|132PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01765008395 (10)ref|XP_010526375.1|150PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01
JMFF050M12Sequence589008395 (10)ref|XP_010526375.1|153PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01273008395 (10)
JMSF002D18Sequence329008395 (10)ref|XP_010323346.1|2e-13PREDICTED: uncharacterized protein LOC101260152 isoform X2 [Solanum lycopersicu774008395 (10)ref|XP_010526375.1|203PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01
JMSF016P24Sequence271008395 (10)ref|XP_010323346.1|3e-05PREDICTED: uncharacterized protein LOC101260152 isoform X2 [Solanum lycopersicu766008395 (10)ref|XP_010526375.1|199PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01
JMSF017P24Sequence217008395 (10)672008395 (10)ref|XP_010526375.1|166PREDICTED: uncharacterized protein LOC104803957 [Tarenaya hassleriana] ref|XP_01

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF002D18- GAGTGAGAAT
                      ____________________________________________________________
consensus GAGTGAGAAT
 
. : . : . : . : . : . :
JMSF017P24- GAAGACAGAGCTCAGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
JMSF016P24- GAAGACAGAGCTCAGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
JMSF002D18- TGAAGACAGAGCTCAGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
JMFF022G20- AGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
JMFF050M12- GGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
                      ____________________________________________________________
consensus TGAAGACAGAGCTCAGAACATGGCGGAAGAACCACCGAAGCAGACCTCTTCCTCGGCGGA
 
. : . : . : . : . : . :
JMSF017P24- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
JMSF016P24- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
JMSF002D18- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
JMFF022G20- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
JMFF050M12- GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
                      ____________________________________________________________
consensus GCAATCTTTTTCTACGTCGTCGTTAAAATCTTCTGACGACGCCGTTACGAAAGTGCCCCA
 
. : . : . : . : . : . :
JMSF017P24- NATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
JMSF016P24- GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
JMSF002D18- GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
JMFF022G20- GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
JMFF050M12- GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
                      ____________________________________________________________
consensus GATAACATCAACATATGGGTCTTCCTCAGCTGATAGCAATAACCATATGCACCAAACAAT
 
. : . : . : . : . : . :
JMSF017P24- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACA
JMSF016P24- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
JMSF002D18- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
JMFF022G20- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
JMFF050M12- GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
                      ____________________________________________________________
consensus GTACCAGCCACTCCTTTCTGGATTTTACTACCTACAACAGAACCAGGAGGAGTTGAATCG
 
. : . : . : . : . : . :
JMSF016P24- TGGCCCTGGTCTTTATGCAGTTTCAGTT
JMSF002D18- TGGCCCTGGTCTTTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
JMFF022G20- TGGCCCTGGTCTTTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
JMFF050M12- TGGCCCTGGTCTTTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
rJMSF016P24+ TTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
rJMSF002D18+ TCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
                      ____________________________________________________________
consensus TGGCCCTGGTCTTTATGCAGTTTCAGTTAATCCTTTTATGGATCATATGCCAGGATTTCC
 
. : . : . : . : . : . :
JMSF002D18- ACCCAACACACTTATCCCT
JMFF022G20- ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCACCGAACGTAGTTCTTCTGAGCA
JMFF050M12- ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCACCGAACGTAGTTCTTCTGAGCA
rJMSF016P24+ ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCAC---------TTCTTCTGAGCA
rJMSF017P24+ TGAGCA
rJMSF002D18+ ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCACCGAACGTAGTTCTTCTGAGCA
rJMFF022G20+ TGAGCA
                      ____________________________________________________________
consensus ACCCAACACACTTATCCCTTTAAGATACAGTGTACCCACCGAACGTAGTTCTTCTGAGCA
 
. : . : . : . : . : . :
JMFF022G20- TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
JMFF050M12- TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
rJMSF016P24+ TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
rJMSF017P24+ TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
rJMSF002D18+ TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
rJMFF022G20+ TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
                      ____________________________________________________________
consensus TAGAGCAGGGAGTGATGAGCAAGGACAAGTGGGACAGCAACCACAGCTGCAGCAACATGC
 
. : . : . : . : . : . :
JMFF022G20- CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
JMFF050M12- CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
rJMSF016P24+ CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
rJMSF017P24+ CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
rJMSF002D18+ CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
rJMFF022G20+ CCCTGAACNTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
                      ____________________________________________________________
consensus CCCTGAACCTCAGCGCCAAGTAGTCGTGAGGAGATTCCAAATTGCATTTCAGCGTGACCT
 
. : . : . : . : . : . :
JMFF022G20- CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
JMFF050M12- CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
rJMSF016P24+ CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
rJMSF017P24+ CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
rJMSF002D18+ CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
rJMFF022G20+ CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
                      ____________________________________________________________
consensus CTTTCTGATTCTTAAGCTGGCTGCAGTAATTTTTTTGTTTAATCAAGATGGATCCAAGCA
 
. : . : . : . : . : . :
JMFF022G20- AAGACTTGT
JMFF050M12- AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATAC
rJMSF016P24+ AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
rJMSF017P24+ AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
rJMSF002D18+ AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
rJMFF022G20+ AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
                      ____________________________________________________________
consensus AAGACTTGTTGTCCTTGTGTTTTTTGCTTCACTTATTTACCTATACCAAACTGGAGCTCT
 
. : . : . : . : . : . :
rJMSF016P24+ TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
rJMSF017P24+ TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
rJMSF002D18+ TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
rJMFF022G20+ TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
                      ____________________________________________________________
consensus TGCACCATTGATAAGATGGCTTTCACAAGGAATGCAAAGGGGGGCTGCACCTCCTCAACG
 
. : . : . : . : . : . :
rJMSF016P24+ TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
rJMSF017P24+ TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
rJMSF002D18+ TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
rJMFF022G20+ TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
                      ____________________________________________________________
consensus TCCCAGACCAGCAGTTAGGGCAGAAAATGCCGCACTTGCTGGGAGGCAGGGAAATCAAAA
 
. : . : . : . : . : . :
rJMSF016P24+ TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
rJMSF017P24+ TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
rJMSF002D18+ TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
rJMFF022G20+ TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
                      ____________________________________________________________
consensus TGGTGCTGCAGAAGGGGCAGAAGGAAATGGAGGTGAAAATGGGAATCAGCCAGGCAACGA
 
. : . : . : . : . : . :
rJMSF016P24+ CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
rJMSF017P24+ CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
rJMSF002D18+ CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
rJMFF022G20+ CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
                      ____________________________________________________________
consensus CGGAAATAGGGCAGGCGAGAATGAGCCAGGGGCGGATGCAGGGGTTGTTGCAGAGGAGGG
 
. : . : . : . : . : . :
rJMSF016P24+ CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
rJMSF017P24+ CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
rJMSF002D18+ CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
rJMFF022G20+ CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
rJMFF050M12+ GATCCAAATGATTGTATTTGGGTTCATTACATC
                      ____________________________________________________________
consensus CAATAGGTTGTGGCTAATTGTGAAGGAGATCCAAATGATTGTATTTGGCTTCATTACATC
 
. : . : . : . : . : . :
rJMSF016P24+ ACTGCTTCCTGGGTTTCACAACATAGATTAGATTGATTAGAATTAACTGTACACCAAGTA
rJMSF017P24+ ACTGCTTCCTGGGTTTCACAACATAGANTAGATTGATTAGAATTAACTGTACACCAAGTA
rJMSF002D18+ ACTGCTTCCTGGGTTTCACAACATAGATTAGATTGATTAGAATTAACTGTACACCAAGTA
rJMFF022G20+ ACTGCTTCCTGGGTTTCACAACATAGATTAGATTGATTAGAATTAACTGTACACCAAGTA
rJMFF050M12+ ACTGCTTCCTGGGTTTCCCAACATAGATTAGATTGATTAGAATTAACTGTACCCCAAGTA
                      ____________________________________________________________
consensus ACTGCTTCCTGGGTTTCACAACATAGATTAGATTGATTAGAATTAACTGTACACCAAGTA
 
. : . : . : . : . : . :
rJMSF016P24+ GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
rJMSF017P24+ GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
rJMSF002D18+ GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
rJMFF022G20+ GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
rJMFF050M12+ GTCATATGATCATTCCGGATTTATAAGGAGGATTTTTGTTGTTTCTATACATCTTAAAGG
                      ____________________________________________________________
consensus GTCATATGATCATTCCGGATTTATAAGGATGATTTTTGTTGTTTCTATACATCTTAAAGG
 
. : . : . : . : . : . :
rJMSF016P24+ GAGCTT
rJMSF017P24+ GAGCTT
rJMSF002D18+ GAGCTTCTACTGCCCT
rJMFF022G20+ GAGCTTCTACTGCCCTATTCCCAGTTCCCAAATAGTAAATAATTGTGTTCGAGTATTATT
rJMFF050M12+ GAGGTTTTACTGCCCTATTCCCAGTTCCCAAATAGTAAATAATTGTGTTGGAGTATTATT
                      ____________________________________________________________
consensus GAGCTTCTACTGCCCTATTCCCAGTTCCCAAATAGTAAATAATTGTGTTGGAGTATTATT
 
. : . : . : . : . : . :
rJMFF022G20+ TTGACACTGTAGAAAATCTTAAACTTTTAAT
rJMFF050M12+ TTGACCCTGTAGAAAATTTTAAACTTTTAATGCCAGAAGTTGTGGTGGATTTTGCTTTGT
                      ____________________________________________________________
consensus TTGACCCTGTAGAAAATTTTAAACTTTTAATGCCAGAAGTTGTGGTGGATTTTGCTTTGT