Contig 008394:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043F22Sequence590010300 (2)ref|XP_011069556.1|7e-102PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1 [Sesam600008394 (2)ref|XP_006363902.1|9e-31PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [
JMFF050L11Sequence635010300 (2)ref|XP_011069556.1|3e-108PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1 [Sesam622008394 (2)ref|XP_006363902.1|9e-31PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+                                               ACAAACAATAAATCAATTATACC
rJMFF050L11+                                                CAAACAATAAATCAATTATACC
                      ____________________________________________________________
consensus                                                  ACAAACAATAAATCAATTATACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          TGCAGTGAAAGCTGTCAAGCCATCAGTAGATTCACAAAAGAAATCAACAAATGTTTTGGG
rJMFF050L11+          TGCAGTGAAAGCTGTCAAGCCATCAGTAGATTCACAAAAGAAATCAACAAATGTTTTGGG
                      ____________________________________________________________
consensus             TGCAGTGAAAGCTGTCAAGCCATCAGTAGATTCACAAAAGAAATCAACAAATGTTTTGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          CCTGGCAAATAGTTTTGCTGATCCTAACAAATTTGTGGAAGAAGTCTTGGAAAAAACATC
rJMFF050L11+          CCTGGCAAATAGTTTTGCTGATCCTAACAAATTTGTGGAAGAAGTCTTGGAAAAAACATC
                      ____________________________________________________________
consensus             CCTGGCAAATAGTTTTGCTGATCCTAACAAATTTGTGGAAGAAGTCTTGGAAAAAACATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          TGCTATAATTCTCTCAGAGATCAAAGTGGAGAATGCAAAGCAAGATGGGGATCAACTTGG
rJMFF050L11+          TGCTATAATTCTCTCAGAGATCAAAGTGGAGAATGCAAAGCAAGATGGGGATCAACTTGG
                      ____________________________________________________________
consensus             TGCTATAATTCTCTCAGAGATCAAAGTGGAGAATGCAAAGCAAGATGGGGATCAACTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          CAGTGCATTAGTTGCTGATCTTAGGAAAAGGCTTTCAGAGGAGCTGGAGAGCATGGCTAC
rJMFF050L11+          CAGTGCATTAGTTGCTGATCTTAGGAAAAGGCTTTCAGAGGAGCTGGAGAGCATGGCTAC
                      ____________________________________________________________
consensus             CAGTGCATTAGTTGCTGATCTTAGGAAAAGGCTTTCAGAGGAGCTGGAGAGCATGGCTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          AATGTTCAAGAATGTGGCATATACTGAAGGATTTGCTGCTGGTACTTGCAAACAGCCAAA
rJMFF050L11+          AATGTTCAAGAATGTGGCATATACTGAAGGATTTGCTGCTGGTACTTGCAAACAGCCAAA
                      ____________________________________________________________
consensus             AATGTTCAAGAATGTGGCATATACTGAAGGATTTGCTGCTGGTACTTGCAAACAGCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          GCGGCTATGAAACAAGCAGGCAGTATTGGTGACTGGGATTCTTGATAATATACAAGAGGC
rJMFF050L11+          GCGGCTATGAAACAAGCAGGCAGTATTGGTGACTGGGATTCTTGATAATATACAAGAGGC
                      ____________________________________________________________
consensus             GCGGCTATGAAACAAGCAGGCAGTATTGGTGACTGGGATTCTTGATAATATACAAGAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          TCATTCAAGGATGCTGATACGGTCTAAATGGTACAATATCATCATTTCCTCATGTTAACA
rJMFF050L11+          TCATTCAAGGATGCTGATACGGTCTAAATGGTACAATATCATCATTTCCTCATGTTAACA
                      ____________________________________________________________
consensus             TCATTCAAGGATGCTGATACGGTCTAAATGGTACAATATCATCATTTCCTCATGTTAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          ACTGTTCTTGTTTGAGTTTGAAAGCATTAATAGTCATAGATCGAGATTCTAGTGATGATG
rJMFF050L11+          ACTGTTCTTGTTTGAGTTTGAAAGCATTAATAGTCATAGATCGAGATTCTAGTGATGATG
                      ____________________________________________________________
consensus             ACTGTTCTTGTTTGAGTTTGAAAGCATTAATAGTCATAGATCGAGATTCTAGTGATGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          TTTGCAATTTGAATTCAGTTTCTGATTTTGCACGAATATACTGAACGTAAGTGTGCTAAT
rJMFF050L11+          TTTGCAATTTGAATTCAGTTTCTGATTTTGCACGAATATACTGAACGTAAGTGTGCTAAT
                      ____________________________________________________________
consensus             TTTGCAATTTGAATTCAGTTTCTGATTTTGCACGAATATACTGAACGTAAGTGTGCTAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043F22+          GTCTTTCATGAAGAAATAGAACTTTTTTCATTCCA                         
rJMFF050L11+          GTCTTTCATGAAGAAATAGAACTTTTTTCATTCCAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             GTCTTTCATGAAGAAATAGAACTTTTTTCATTCCAAAAAAAAAAAAAAACTCTCCAGGGT