Contig 008391:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050H11Sequence578003295 (2)ref|XP_010253761.1|1e-36PREDICTED: U-box domain-containing protein 44-like [Nelumbo nucifera]631008391 (2)ref|XP_002278953.1|5e-45PREDICTED: U-box domain-containing protein 44-like [Vitis vinifera]
JMSF011G22Sequence255003295 (2)719008391 (2)ref|XP_007208077.1|3e-63hypothetical protein PRUPE_ppa001588mg [Prunus persica] gb|EMJ09276.1| hypotheti

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF011G22+ CCCCGGCATCCAAAAGGGCTGTGCT
                      ____________________________________________________________
consensus CCCCGGCATCCAAAAGGGCTGTGCT
 
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rJMSF011G22+ CTCCGTTGGCACTCATTTGTGGGGGTTCCAAGTCGCCTTCTTCGTGCCCCATCCACAATG
                      ____________________________________________________________
consensus CTCCGTTGGCACTCATTTGTGGGGGTTCCAAGTCGCCTTCTTCGTGCCCCATCCACAATG
 
. : . : . : . : . : . :
rJMSF011G22+ CCCCTTGTGGAGACGACAGTCAATTTTGCTTGTTAAGGAGCAACTGTGTGAAGCCTCTTG
                      ____________________________________________________________
consensus CCCCTTGTGGAGACGACAGTCAATTTTGCTTGTTAAGGAGCAACTGTGTGAAGCCTCTTG
 
. : . : . : . : . : . :
rJMSF011G22+ TGGACTCCATCACTGATAAGGACACCAGTGTCCAAATCGCAGCACTGGAAGCTCTTTCCA
rJMFF050H11+ GTCCAAATCGCAGCACTGGAAGCTCTTTCCA
                      ____________________________________________________________
consensus TGGACTCCATCACTGATAAGGACACCAGTGTCCAAATCGCAGCACTGGAAGCTCTTTCCA
 
. : . : . : . : . : . :
rJMSF011G22+ CTCTATTGTTGGATACCTCTAGTGGCTCTAAGCGGGCTATTGAGGAGCTCGAACGCCTCG
rJMFF050H11+ CTCTATGTTGGGATACCTCTAGTGGCTCTAAGCGGGCTATTGAGGAGCTCGAACGCCTCG
                      ____________________________________________________________
consensus CTCTATTTTTGGATACCTCTAGTGGCTCTAAGCGGGCTATTGAGGAGCTCGAACGCCTCG
 
. : . : . : . : . : . :
rJMSF011G22+ GTGTGGTGAGCTCTGTGGTTTCGCTCTTCACACAAGCTCGACCAGGGGAGCTTCAAGAGA
rJMFF050H11+ GTGTGGTGAGCTCTGTGGTTTCGCTCTTCACACAAGCTCGACCAGGGGAGCTTCAAGAGA
                      ____________________________________________________________
consensus GTGTGGTGAGCTCTGTGGTTTCGCTCTTCACACAAGCTCGACCAGGGGAGCTTCAAGAGA
 
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rJMSF011G22+ GGACTATTTGGATGGTCGAAAGGATCCTGAGAGTCGAGAGCTTTACTCAACAGCATTCGC
rJMFF050H11+ GGACTATTTGGATGGTCGAAAGGATCCTGAGAGTCGAGAGCTTTACTCAACAGCATTCGC
                      ____________________________________________________________
consensus GGACTATTTGGATGGTCGAAAGGATCCTGAGAGTCGAGAGCTTTACTCAACAGCATTCGC
 
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rJMSF011G22+ TAAACCAGTCCCTGGTTAAAGCTTTGGTGGATGCATTTAAGCATGGGAACGCCATCACAA
rJMFF050H11+ TAAACCAGTCCCTGGTTAAAGCTTTGGTGGATGCATTTAAGCATGGGAACGCCATCACAA
                      ____________________________________________________________
consensus TAAACCAGTCCCTGGTTAAAGCTTTGGTGGATGCATTTAAGCATGGGAACGCCATCACAA
 
. : . : . : . : . : . :
rJMSF011G22+ AGAGGCACGCGCAAGACGCTCTTACTAACCTGAAGCAAATATCCGGGACCAGTGGAAAGA
rJMFF050H11+ AGAGGCACGCGCAAGACGCTCTTACTAACCTGAAGCAAATATCCGGGACCAGTGGAAAGA
                      ____________________________________________________________
consensus AGAGGCACGCGCAAGACGCTCTTACTAACCTGAAGCAAATATCCGGGACCAGTGGAAAGA
 
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rJMSF011G22+ CATCGAGCCAAAACCGGGGAAGGAGGTAGCGATTAGCACCTCGAGACTTGACAGAGAACT
rJMFF050H11+ CATCGAGCCAAAACCGGGGAAGGAGGTAGCGATTAGCACCTCGAGACTTGACAGAGAACT
                      ____________________________________________________________
consensus CATCGAGCCAAAACCGGGGAAGGAGGTAGCGATTAGCACCTCGAGACTTGACAGAGAACT
 
. : . : . : . : . : . :
rJMSF011G22+ TGTGCATCAGTTCACCAAGTAACTCTCTTATCCTTCTCTAAATGTTTCACTTATTCATTG
rJMFF050H11+ TGTGCATCAGTTCACCAAGTAACTCTCTTATCCTTCTCTAAATGTTTCACTTATTCATTG
                      ____________________________________________________________
consensus TGTGCATCAGTTCACCAAGTAACTCTCTTATCCTTCTCTAAATGTTTCACTTATTCATTG
 
. : . : . : . : . : . :
rJMSF011G22+ ATTGTTCAAAGTATATTCCCAAATCCCAAATCATAAAACTTCAGGTTTCTGTAAATGTCT
rJMFF050H11+ ATTGTTCAAAGTATATTCCCAAATCCCAAATCATAAAACTTCAGGTTTCTGTAAATGTCT
                      ____________________________________________________________
consensus ATTGTTCAAAGTATATTCCCAAATCCCAAATCATAAAACTTCAGGTTTCTGTAAATGTCT
 
. : . : . : . : . : . :
rJMSF011G22+ GACAAAACGATTTCAACTATGAC
rJMFF050H11+ GACAAAACGATTTCAACTATGACAGTTATACTTTAGTACAGGATGCATTTTAATGACTAA
                      ____________________________________________________________
consensus GACAAAACGATTTCAACTATGACAGTTATACTTTAGTACAGGATGCATTTTAATGACTAA
 
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rJMFF050H11+ TTCAGTAGATTGTGGTGGTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TTCAGTAGATTGTGGTGGTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG