Contig 008391:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050H11Sequence578003295 (2)ref|XP_010253761.1|1e-36PREDICTED: U-box domain-containing protein 44-like [Nelumbo nucifera]631008391 (2)ref|XP_002278953.1|5e-45PREDICTED: U-box domain-containing protein 44-like [Vitis vinifera]
JMSF011G22Sequence255003295 (2)719008391 (2)ref|XP_007208077.1|3e-63hypothetical protein PRUPE_ppa001588mg [Prunus persica] gb|EMJ09276.1| hypotheti

Alignment

This contig is upended


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rJMSF011G22+                                             CCCCGGCATCCAAAAGGGCTGTGCT
                      ____________________________________________________________
consensus                                                CCCCGGCATCCAAAAGGGCTGTGCT
 
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rJMSF011G22+          CTCCGTTGGCACTCATTTGTGGGGGTTCCAAGTCGCCTTCTTCGTGCCCCATCCACAATG
                      ____________________________________________________________
consensus             CTCCGTTGGCACTCATTTGTGGGGGTTCCAAGTCGCCTTCTTCGTGCCCCATCCACAATG
 
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rJMSF011G22+          CCCCTTGTGGAGACGACAGTCAATTTTGCTTGTTAAGGAGCAACTGTGTGAAGCCTCTTG
                      ____________________________________________________________
consensus             CCCCTTGTGGAGACGACAGTCAATTTTGCTTGTTAAGGAGCAACTGTGTGAAGCCTCTTG
 
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rJMSF011G22+          TGGACTCCATCACTGATAAGGACACCAGTGTCCAAATCGCAGCACTGGAAGCTCTTTCCA
rJMFF050H11+                                       GTCCAAATCGCAGCACTGGAAGCTCTTTCCA
                      ____________________________________________________________
consensus             TGGACTCCATCACTGATAAGGACACCAGTGTCCAAATCGCAGCACTGGAAGCTCTTTCCA
 
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rJMSF011G22+          CTCTATTGTTGGATACCTCTAGTGGCTCTAAGCGGGCTATTGAGGAGCTCGAACGCCTCG
rJMFF050H11+          CTCTATGTTGGGATACCTCTAGTGGCTCTAAGCGGGCTATTGAGGAGCTCGAACGCCTCG
                      ____________________________________________________________
consensus             CTCTATTTTTGGATACCTCTAGTGGCTCTAAGCGGGCTATTGAGGAGCTCGAACGCCTCG
 
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rJMSF011G22+          GTGTGGTGAGCTCTGTGGTTTCGCTCTTCACACAAGCTCGACCAGGGGAGCTTCAAGAGA
rJMFF050H11+          GTGTGGTGAGCTCTGTGGTTTCGCTCTTCACACAAGCTCGACCAGGGGAGCTTCAAGAGA
                      ____________________________________________________________
consensus             GTGTGGTGAGCTCTGTGGTTTCGCTCTTCACACAAGCTCGACCAGGGGAGCTTCAAGAGA
 
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rJMSF011G22+          GGACTATTTGGATGGTCGAAAGGATCCTGAGAGTCGAGAGCTTTACTCAACAGCATTCGC
rJMFF050H11+          GGACTATTTGGATGGTCGAAAGGATCCTGAGAGTCGAGAGCTTTACTCAACAGCATTCGC
                      ____________________________________________________________
consensus             GGACTATTTGGATGGTCGAAAGGATCCTGAGAGTCGAGAGCTTTACTCAACAGCATTCGC
 
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rJMSF011G22+          TAAACCAGTCCCTGGTTAAAGCTTTGGTGGATGCATTTAAGCATGGGAACGCCATCACAA
rJMFF050H11+          TAAACCAGTCCCTGGTTAAAGCTTTGGTGGATGCATTTAAGCATGGGAACGCCATCACAA
                      ____________________________________________________________
consensus             TAAACCAGTCCCTGGTTAAAGCTTTGGTGGATGCATTTAAGCATGGGAACGCCATCACAA
 
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rJMSF011G22+          AGAGGCACGCGCAAGACGCTCTTACTAACCTGAAGCAAATATCCGGGACCAGTGGAAAGA
rJMFF050H11+          AGAGGCACGCGCAAGACGCTCTTACTAACCTGAAGCAAATATCCGGGACCAGTGGAAAGA
                      ____________________________________________________________
consensus             AGAGGCACGCGCAAGACGCTCTTACTAACCTGAAGCAAATATCCGGGACCAGTGGAAAGA
 
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rJMSF011G22+          CATCGAGCCAAAACCGGGGAAGGAGGTAGCGATTAGCACCTCGAGACTTGACAGAGAACT
rJMFF050H11+          CATCGAGCCAAAACCGGGGAAGGAGGTAGCGATTAGCACCTCGAGACTTGACAGAGAACT
                      ____________________________________________________________
consensus             CATCGAGCCAAAACCGGGGAAGGAGGTAGCGATTAGCACCTCGAGACTTGACAGAGAACT
 
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rJMSF011G22+          TGTGCATCAGTTCACCAAGTAACTCTCTTATCCTTCTCTAAATGTTTCACTTATTCATTG
rJMFF050H11+          TGTGCATCAGTTCACCAAGTAACTCTCTTATCCTTCTCTAAATGTTTCACTTATTCATTG
                      ____________________________________________________________
consensus             TGTGCATCAGTTCACCAAGTAACTCTCTTATCCTTCTCTAAATGTTTCACTTATTCATTG
 
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rJMSF011G22+          ATTGTTCAAAGTATATTCCCAAATCCCAAATCATAAAACTTCAGGTTTCTGTAAATGTCT
rJMFF050H11+          ATTGTTCAAAGTATATTCCCAAATCCCAAATCATAAAACTTCAGGTTTCTGTAAATGTCT
                      ____________________________________________________________
consensus             ATTGTTCAAAGTATATTCCCAAATCCCAAATCATAAAACTTCAGGTTTCTGTAAATGTCT
 
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rJMSF011G22+          GACAAAACGATTTCAACTATGAC                                     
rJMFF050H11+          GACAAAACGATTTCAACTATGACAGTTATACTTTAGTACAGGATGCATTTTAATGACTAA
                      ____________________________________________________________
consensus             GACAAAACGATTTCAACTATGACAGTTATACTTTAGTACAGGATGCATTTTAATGACTAA
 
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rJMFF050H11+          TTCAGTAGATTGTGGTGGTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTCAGTAGATTGTGGTGGTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG