Contig 008390:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011P13Sequence516000068 (8)ref|XP_009617293.1|202PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis]736008390 (9)ref|XP_009771440.1|246PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris]
JMFF014M05Sequence521000068 (8)ref|XP_009617293.1|204PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis]778008390 (9)ref|XP_009771440.1|242PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris]
JMFF020K02Sequence342000068 (8)ref|XP_009617293.1|99.0PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis]682008390 (9)ref|XP_009771440.1|193PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris]
JMFF032N01Sequence448000068 (8)ref|XP_009617293.1|163PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis]730008390 (9)ref|XP_009771440.1|211PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris]
JMFF046P16Sequence449000068 (8)ref|XP_009617293.1|163PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis]472008390 (9)ref|XP_009771440.1|88.6PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris]
JMFF047I14Sequence439000068 (8)ref|XP_009617293.1|155PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis]361008390 (9)
JMFF050G04Sequence577000068 (8)ref|XP_009617293.1|232PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis]414008390 (9)
JMFN013O20Sequence535008390 (9)ref|XP_009771440.1|117PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris]
JMFN018B01Sequence601008390 (9)ref|XP_009771440.1|315PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN018B01-                      CGCTCTACCCTCCTAGACCTACTAATGTGAACTTGGTAAAGAACGCGGA
                      ____________________________________________________________
consensus                        CGCTCTACCCTCCTAGACCTACTAATGTGAACTTGGTAAAGAACGCGGA
 
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JMFN018B01-           TTTCGAGGAGGGTCCATACTTGTTCGCGAACGTGACAACCGGCGTTCTTTGCCCGCCCTT
                      ____________________________________________________________
consensus             TTTCGAGGAGGGTCCATACTTGTTCGCGAACGTGACAACCGGCGTTCTTTGCCCGCCCTT
 
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JMFN018B01-           CATCGAGGACGACCACTCTCCCATCCCGGCGTGGACGGTGGACTCTCTGAAAGCCGTGAA
rJMFF011P13+                                         TGGACGGTGGACTCTCTGAAAGCCGTGAA
rJMFF014M05+                                         TGGACGGTGGACTCTCTGAAAGCCGTGAA
                      ____________________________________________________________
consensus             CATCGAGGACGACCACTCTCCCATCCCGGCGTGGACGGTGGACTCTCTGAAAGCCGTGAA
 
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JMFN018B01-           GTACATAGACGCGGAGCATTTCTCGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
rJMFF011P13+          GTACATAGACGCGGAGCATTTCTCGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
rJMFF020K02+                                                                    GC
rJMFF014M05+          GTACATAGACGCGGAGCATTTCTCGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
rJMFF032N01+                                 CGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
                      ____________________________________________________________
consensus             GTACATAGACGCGGAGCATTTCTCGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
 
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JMFN018B01-           CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
rJMFF011P13+          CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
rJMFF020K02+          CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
rJMFF014M05+          CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
rJMFF032N01+          CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
                      ____________________________________________________________
consensus             CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
 
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JMFN018B01-           CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
rJMFF011P13+          CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
rJMFF020K02+          CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
rJMFF014M05+          CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
rJMFF032N01+          CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
                      ____________________________________________________________
consensus             CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
 
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JMFN018B01-           CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGATTCCAAGGGCAAGGGCGGATTTAAACC
rJMFF011P13+          CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
JMFN013O20-                 GCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
rJMFF020K02+          CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
rJMFF014M05+          CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
rJMFF032N01+          CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
                      ____________________________________________________________
consensus             CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
 
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JMFN018B01-           GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF011P13+          GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
JMFN013O20-           GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF046P16+                   CCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF020K02+          GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF014M05+          GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF032N01+          GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
                      ____________________________________________________________
consensus             GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
 
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JMFN018B01-           CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
rJMFF011P13+          CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
JMFN013O20-           CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTTTTGACCACGTCAG
rJMFF046P16+          CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
rJMFF020K02+          CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
rJMFF014M05+          CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
rJMFF032N01+          CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
                      ____________________________________________________________
consensus             CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
 
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JMFN018B01-           GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTNTCG
rJMFF011P13+          GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
JMFN013O20-           GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF046P16+          GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF020K02+          GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF014M05+          GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF032N01+          GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF050G04+                CAGTGTTTGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
                      ____________________________________________________________
consensus             GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
 
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JMFN018B01-           ATTATACTATAT                                                
rJMFF011P13+          ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
JMFN013O20-           ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF046P16+          ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF020K02+          ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF014M05+          ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF032N01+          ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF047I14+                              GAAGATATATCCATTTTACTTCCCCCAATTTCTGTTATTG
rJMFF050G04+          ATTATACTATATATGAAGATGAAGATATATCAATTTTTCTTCCCCAAATACTGTTTATTG
                      ____________________________________________________________
consensus             ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
 
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rJMFF011P13+          AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
JMFN013O20-           AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF046P16+          AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF020K02+          AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF014M05+          AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF032N01+          AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF047I14+          AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF050G04+          AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
                      ____________________________________________________________
consensus             AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
 
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rJMFF011P13+          GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
JMFN013O20-           GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF046P16+          GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF020K02+          GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF014M05+          GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF032N01+          GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF047I14+          GGAGAAAGTTTGTCTTCCCTCATAGTATGCATGCATGATATTTCTAACTACTACTATAGG
rJMFF050G04+          GGAGAAAGTTTGTCTTCCCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
                      ____________________________________________________________
consensus             GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
 
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rJMFF011P13+          AATACTTCTATTTATATATATGCATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
JMFN013O20-           AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF046P16+          AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF020K02+          AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF014M05+          AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF032N01+          AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF047I14+          AATACTTCTATTTATATATATGTAGGACTCTCTAGGGGAAGTCAATATATAGTATTATGT
rJMFF050G04+          AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
                      ____________________________________________________________
consensus             AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
 
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rJMFF011P13+          ATATTGTGATGGGTACGTGTTGAATGGTAATT                            
JMFN013O20-           ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF046P16+          ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF020K02+          ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF014M05+          ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF032N01+          ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF047I14+          ATATTGTGATGGGTACGGGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF050G04+          ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
                      ____________________________________________________________
consensus             ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
 
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JMFN013O20-           C                                                           
rJMFF046P16+          C                                                           
rJMFF020K02+          CAATGAATGTTTGTAATATT                                        
rJMFF014M05+          CAATGAATGTTTGTAATATTTCGAGTG                                 
rJMFF032N01+          CAATGAATGTTTGTAATATTTCGAGTG                                 
rJMFF047I14+          CAAAGAATGTTTGTAATATTTCGAGTGTGATACGGGAAAATCCTTTGTCGTAG       
rJMFF050G04+          CAATGAATGTTTGTAATATTTCGAGTGTGATACGGGAAAATCCTTTGTCGTAGTTTTTCG
                      ____________________________________________________________
consensus             CAATGAATGTTTGTAATATTTCGAGTGTGATACGGGAAAATCCTTTGTCGTAGTTTTTCG