clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011P13 | Sequence | 516 | 000068 (8) | ref|XP_009617293.1| | 202 | PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis] | 736 | 008390 (9) | ref|XP_009771440.1| | 246 | PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris] |
JMFF014M05 | Sequence | 521 | 000068 (8) | ref|XP_009617293.1| | 204 | PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis] | 778 | 008390 (9) | ref|XP_009771440.1| | 242 | PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris] |
JMFF020K02 | Sequence | 342 | 000068 (8) | ref|XP_009617293.1| | 99.0 | PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis] | 682 | 008390 (9) | ref|XP_009771440.1| | 193 | PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris] |
JMFF032N01 | Sequence | 448 | 000068 (8) | ref|XP_009617293.1| | 163 | PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis] | 730 | 008390 (9) | ref|XP_009771440.1| | 211 | PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris] |
JMFF046P16 | Sequence | 449 | 000068 (8) | ref|XP_009617293.1| | 163 | PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis] | 472 | 008390 (9) | ref|XP_009771440.1| | 88.6 | PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris] |
JMFF047I14 | Sequence | 439 | 000068 (8) | ref|XP_009617293.1| | 155 | PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis] | 361 | 008390 (9) | |||
JMFF050G04 | Sequence | 577 | 000068 (8) | ref|XP_009617293.1| | 232 | PREDICTED: uncharacterized protein LOC104109646 [Nicotiana tomentosiformis] | 414 | 008390 (9) | |||
JMFN013O20 | Sequence | 535 | 008390 (9) | ref|XP_009771440.1| | 117 | PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris] | |||||
JMFN018B01 | Sequence | 601 | 008390 (9) | ref|XP_009771440.1| | 315 | PREDICTED: uncharacterized protein LOC104221976 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFN018B01- CGCTCTACCCTCCTAGACCTACTAATGTGAACTTGGTAAAGAACGCGGA
____________________________________________________________
consensus CGCTCTACCCTCCTAGACCTACTAATGTGAACTTGGTAAAGAACGCGGA
. : . : . : . : . : . :
JMFN018B01- TTTCGAGGAGGGTCCATACTTGTTCGCGAACGTGACAACCGGCGTTCTTTGCCCGCCCTT
____________________________________________________________
consensus TTTCGAGGAGGGTCCATACTTGTTCGCGAACGTGACAACCGGCGTTCTTTGCCCGCCCTT
. : . : . : . : . : . :
JMFN018B01- CATCGAGGACGACCACTCTCCCATCCCGGCGTGGACGGTGGACTCTCTGAAAGCCGTGAA
rJMFF011P13+ TGGACGGTGGACTCTCTGAAAGCCGTGAA
rJMFF014M05+ TGGACGGTGGACTCTCTGAAAGCCGTGAA
____________________________________________________________
consensus CATCGAGGACGACCACTCTCCCATCCCGGCGTGGACGGTGGACTCTCTGAAAGCCGTGAA
. : . : . : . : . : . :
JMFN018B01- GTACATAGACGCGGAGCATTTCTCGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
rJMFF011P13+ GTACATAGACGCGGAGCATTTCTCGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
rJMFF020K02+ GC
rJMFF014M05+ GTACATAGACGCGGAGCATTTCTCGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
rJMFF032N01+ CGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
____________________________________________________________
consensus GTACATAGACGCGGAGCATTTCTCGGTGCCCCACGGCAGGAGAGCCGTGGAACTGGTGGC
. : . : . : . : . : . :
JMFN018B01- CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
rJMFF011P13+ CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
rJMFF020K02+ CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
rJMFF014M05+ CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
rJMFF032N01+ CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
____________________________________________________________
consensus CGGGAAAGAGAGCGCCATCGCTCAAATCACCAGAACAATTGTGGGCAAAATTTACGACCT
. : . : . : . : . : . :
JMFN018B01- CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
rJMFF011P13+ CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
rJMFF020K02+ CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
rJMFF014M05+ CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
rJMFF032N01+ CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
____________________________________________________________
consensus CACGTTCCTGGTGGGAGACGCCAGCAACTCGTGCGAGGGCTCCATGATCGTGGAGGCGTT
. : . : . : . : . : . :
JMFN018B01- CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGATTCCAAGGGCAAGGGCGGATTTAAACC
rJMFF011P13+ CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
JMFN013O20- GCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
rJMFF020K02+ CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
rJMFF014M05+ CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
rJMFF032N01+ CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
____________________________________________________________
consensus CGCCGGGCAGTCCACGCTCAAAGTCCCCTACGAGTCCAAGGGCAAGGGCGGATTTAAACC
. : . : . : . : . : . :
JMFN018B01- GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF011P13+ GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
JMFN013O20- GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF046P16+ CCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF020K02+ GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF014M05+ GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
rJMFF032N01+ GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
____________________________________________________________
consensus GGCCAAACTCCGGTTCAAGGCCACCGCTAACAGAACCAGGATTATGTTCTTCAGCACATA
. : . : . : . : . : . :
JMFN018B01- CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
rJMFF011P13+ CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
JMFN013O20- CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTTTTGACCACGTCAG
rJMFF046P16+ CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
rJMFF020K02+ CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
rJMFF014M05+ CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
rJMFF032N01+ CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
____________________________________________________________
consensus CTACCATACACGAAGCGATGACTTTGTCTCACTCTGTGGCCCCGTTGTTGACCACGTCAG
. : . : . : . : . : . :
JMFN018B01- GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTNTCG
rJMFF011P13+ GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
JMFN013O20- GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF046P16+ GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF020K02+ GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF014M05+ GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF032N01+ GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
rJMFF050G04+ CAGTGTTTGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
____________________________________________________________
consensus GCTTCTCAGTGTTCGTCATCCCAATTTTCTCCCTTAAATTCAATCCATATATAATTTTCG
. : . : . : . : . : . :
JMFN018B01- ATTATACTATAT
rJMFF011P13+ ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
JMFN013O20- ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF046P16+ ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF020K02+ ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF014M05+ ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF032N01+ ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
rJMFF047I14+ GAAGATATATCCATTTTACTTCCCCCAATTTCTGTTATTG
rJMFF050G04+ ATTATACTATATATGAAGATGAAGATATATCAATTTTTCTTCCCCAAATACTGTTTATTG
____________________________________________________________
consensus ATTATACTATATATGAAGATGAAGATATATCAATTTTACTTCCCCAAATACTGTTTATTG
. : . : . : . : . : . :
rJMFF011P13+ AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
JMFN013O20- AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF046P16+ AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF020K02+ AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF014M05+ AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF032N01+ AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF047I14+ AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
rJMFF050G04+ AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
____________________________________________________________
consensus AACCAGAGATCGTGCGGATATATATGGATTTTTGTTGTAATATGAAGCGAGGAGATCGAT
. : . : . : . : . : . :
rJMFF011P13+ GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
JMFN013O20- GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF046P16+ GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF020K02+ GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF014M05+ GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF032N01+ GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
rJMFF047I14+ GGAGAAAGTTTGTCTTCCCTCATAGTATGCATGCATGATATTTCTAACTACTACTATAGG
rJMFF050G04+ GGAGAAAGTTTGTCTTCCCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
____________________________________________________________
consensus GGAGAAAGTTTGTCTTACCTCATAGTATGCATGCATGATATTACTAACTACTACTATATG
. : . : . : . : . : . :
rJMFF011P13+ AATACTTCTATTTATATATATGCATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
JMFN013O20- AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF046P16+ AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF020K02+ AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF014M05+ AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF032N01+ AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
rJMFF047I14+ AATACTTCTATTTATATATATGTAGGACTCTCTAGGGGAAGTCAATATATAGTATTATGT
rJMFF050G04+ AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
____________________________________________________________
consensus AATACTTCTATTTATATATATGTATGACTCTCTAGTGGAAGTCAATATATAGTATTATGT
. : . : . : . : . : . :
rJMFF011P13+ ATATTGTGATGGGTACGTGTTGAATGGTAATT
JMFN013O20- ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF046P16+ ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF020K02+ ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF014M05+ ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF032N01+ ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF047I14+ ATATTGTGATGGGTACGGGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
rJMFF050G04+ ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
____________________________________________________________
consensus ATATTGTGATGGGTACGTGTTGAATGGTAATTTGTTGAAATAATAATTATATACTTCGAT
. : . : . : . : . : . :
JMFN013O20- C
rJMFF046P16+ C
rJMFF020K02+ CAATGAATGTTTGTAATATT
rJMFF014M05+ CAATGAATGTTTGTAATATTTCGAGTG
rJMFF032N01+ CAATGAATGTTTGTAATATTTCGAGTG
rJMFF047I14+ CAAAGAATGTTTGTAATATTTCGAGTGTGATACGGGAAAATCCTTTGTCGTAG
rJMFF050G04+ CAATGAATGTTTGTAATATTTCGAGTGTGATACGGGAAAATCCTTTGTCGTAGTTTTTCG
____________________________________________________________
consensus CAATGAATGTTTGTAATATTTCGAGTGTGATACGGGAAAATCCTTTGTCGTAGTTTTTCG