Contig 008371:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011A22Sequence528010660 (9)ref|XP_002277525.1|5e-72PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] emb|CBI40422.3| unnam743008371 (9)ref|XP_009773920.1|1e-83PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris]
JMFF044O24Sequence604010660 (9)ref|XP_002277525.1|6e-81PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] emb|CBI40422.3| unnam573008371 (9)ref|XP_009773920.1|7e-33PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris]
JMFF047O08Sequence418010660 (9)gb|ACU19312.1|1e-39unknown [Glycine max]395008371 (9)
JMSF001E19Sequence372010660 (9)ref|XP_006396278.1|4e-40hypothetical protein EUTSA_v10028603mg [Eutrema salsugineum] gb|ESQ37731.1| hypo754008371 (9)ref|XP_009773920.1|4e-86PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris]
JMSF012O23Sequence280010660 (9)ref|XP_006444969.1|1e-26hypothetical protein CICLE_v10020054mg [Citrus clementina] gb|ESR58209.1| hypoth741008371 (9)ref|XP_009773920.1|1e-90PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris]
JMSF018I15Sequence532010660 (9)ref|XP_002277525.1|3e-63PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] emb|CBI40422.3| unnam816008371 (9)ref|XP_009773920.1|3e-103PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris]
JMSF029B05Sequence651010660 (9)ref|XP_011093122.1|5e-89PREDICTED: CAAX prenyl protease 1 homolog [Sesamum indicum]772008371 (9)ref|XP_009773920.1|1e-106PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris]
JMSF038M18Sequence667010660 (9)ref|XP_002277525.1|7e-109PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] emb|CBI40422.3| unnam862008371 (9)ref|XP_009773920.1|1e-121PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris]
JMSF039M18Sequence361010660 (9)gb|ACU19312.1|3e-35unknown [Glycine max]482008371 (9)ref|XP_009773920.1|2e-25PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF038M18+                                                                     A
                      ____________________________________________________________
consensus                                                                        A
 
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rJMSF038M18+          NGTCAAGCCATAGCAATGCATACATGTATGGATTCTTCAAGAACAAGCGCATTGTCCTTT
                      ____________________________________________________________
consensus             NGTCAAGCCATAGCAATGCATACATGTATGGATTCTTCAAGAACAAGCGCATTGTCCTTT
 
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rJMSF029B05+                   TGATTCAGCAGTGCAAGAATGACGAGGAAGTTGTTGCTGTTCTTGCACACG
rJMSF038M18+          ATGATACGTTGATTCAGCAGTGCAAGAATGACGAGGAAGTTGTTGCTGTTCTTGCACACG
rJMSF012O23+                                                                   ACG
rJMSF018I15+                   TGATTCAGCAGTGCAAGAATGACGAGGAAGTTGTTGCTGTTCTTGCACACG
                      ____________________________________________________________
consensus             ATGATACGTTGATTCAGCAGTGCAAGAATGACGAGGAAGTTGTTGCTGTTCTTGCACACG
 
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rJMSF029B05+          AATTAGGCCACTGGAAACTAAATCACACAATGTACTCCTTCATTGCTGTCCAGATCCTCA
rJMSF038M18+          AATTAGGCCACTGGAAACTAAATCACACAATGTACTCCTTCATTGCTGTCCAGATCCTCA
rJMSF012O23+          AATTAGGCCACTGGAAACTAAATCACACAATGTACTCCTTCATTGCTGTCCAGATCCTCA
rJMSF001E19+                      GGAAACTAAATCACACAATGTACTCCTTCATTGCTGTCCAGATCCTCA
rJMSF018I15+          AATTAGGCCACTGGAAACTAAATCACACAATGTACTCCTTCATTGCTGTCCAGATCCTCA
rJMFF011A22+                                TCACACAATGTACTCCTTCATTGCTGTCCAGATCCTCA
                      ____________________________________________________________
consensus             AATTAGGCCACTGGAAACTAAATCACACAATGTACTCCTTCATTGCTGTCCAGATCCTCA
 
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rJMSF029B05+          CATTCTTACAATTTGGAGGATACACACTTGTTAGGAATTCCAAGGATCTGTTTCAGAGTT
rJMSF038M18+          CATTCTTACAATTTGGAGGATACACACTTGTTAGGAATTCCAAGGATCTGTTTCAGAGTT
rJMSF012O23+          CATTCTTACAATTTGGAGGATACACACTTGTTAGGAATTCCAAGGATCTGTTTCAGAGTT
rJMSF001E19+          CATTCTTACAATTTGGAGGATACACACTTGTTAGGAATTCCAAGGATCTGTTTCAGAGTT
rJMSF018I15+          CATTCTTACAATTTGGAGGATACACACTTGTTAGGAATTCCAAGGATCTGTTTCAGAGTT
rJMFF011A22+          CATTCTTACAATTTGGAGGATACACACTTGTTAGGAATTCCAAGGATCTGTTTCAGAGTT
                      ____________________________________________________________
consensus             CATTCTTACAATTTGGAGGATACACACTTGTTAGGAATTCCAAGGATCTGTTTCAGAGTT
 
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rJMSF029B05+          TTGGCTTTGAAACTCAACCTGTTCTTATTGGGCTTATCATTTTTCAGCACACTGTAATTC
rJMSF038M18+          TTGGCTTTGAAACTCAACCTGTTCTTATTGGGCTTATCATTTTTCAGCACACTGTAATTC
rJMSF012O23+          TTGGCTTTGAAACTCAACCTGTTCTTATTGGGCTTATCATTTTTCAGCACACTGTAATTC
rJMSF001E19+          TTGGCTTTGAAACTCAACCTGTTCTTATTGGGCTTATCATTTTTCAGCACACTGTAATTC
rJMSF018I15+          TTGGCTTTGAAACTCAACCTGTTCTTATTGGGCTTATCATTTTTCAGCACACTGTAATTC
rJMFF011A22+          TTGGCTTTGAAACTCAACCTGTTCTTATTGGGCTTATCATTTTTCAGCACACTGTAATTC
                      ____________________________________________________________
consensus             TTGGCTTTGAAACTCAACCTGTTCTTATTGGGCTTATCATTTTTCAGCACACTGTAATTC
 
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rJMSF029B05+          CTCTCCAGCACCTAGTGAGTTTCGGTCTTAATCTTGTTAGCCGAGCTTTTGAATTTCAGG
rJMSF038M18+          CTCTCCAGCACCTAGTGAGTTTCGGTCTTAATCTTGTTAGCCGAGCTTTTGAATTTCAGG
rJMSF012O23+          CTCTCCAGCACCTAGTGAGTTTCGGTCTTAATCTTGTTAGCCGAGCTTTTGAATTTCAGG
rJMSF001E19+          CTCTCCAGCACCTAGTGAGTTTCGGTCTTAATCTTGTTAGCCGAGCTTTTGAATTTCAGG
rJMSF018I15+          CTCTCCAGCACCTAGTGAGTTTCGGTCTTAATCTTGTTAGCCGAGCTTTTGAATTTCAGG
rJMFF011A22+          CTCTCCAGCACCTAGTGAGTTTCGGTCTTAATCTTGTTAGCCGAGCTTTTGAATTTCAGG
rJMFF044O24+                                    CTTAATCTTGTTAGCCGAGC-TTTGAATTTCAGG
                      ____________________________________________________________
consensus             CTCTCCAGCACCTAGTGAGTTTCGGTCTTAATCTTGTTAGCCGAGCTTTTGAATTTCAGG
 
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rJMSF029B05+          CTGATGCCTTTGCTAAGAAGCTTGGATATGCATTGCCTCTTCGTGCTGGACTTGTAAAAC
rJMSF038M18+          CTGATGCCTTTGCTAAGAAGCTTGGATATGCATTGCCTCTTCGTGCTGGACTTGTAAAAC
rJMSF012O23+          CTGATGCCTTTGCTAAGAAGCTTGGATATGCATTGCCTCTTCGTGCTGGACTTGTAAAAC
rJMSF001E19+          CTGATGCCTTTGCTAAGAAGCTTGGATATGCATTGCCTCTTCGTGCTGGACTTGTAAAAC
rJMSF018I15+          CTGATGCCTTTGCTAAGAAGCTTGGATATGCATTGCCTCTTCGTGCTGGACTTGTAAAAC
rJMSF039M18+                      CTAAGAAGCTTGGATATGCATTGCCTCTTCGTGNTGGACNTGTAAAAC
rJMFF011A22+          CTGATGCCTTTGCTAAGAAGCTTGGATATGCATTGCCTCTTCGTGCTGGACTTGTAAAAC
rJMFF044O24+          CTGATGCCTNTGCTAAGAAGCTNGGATATGCATTGCCTCTTCGTGCTGGACTTGTAAAAC
                      ____________________________________________________________
consensus             CTGATGCCTTTGCTAAGAAGCTTGGATATGCATTGCCTCTTCGTGCTGGACTTGTAAAAC
 
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rJMSF029B05+          TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
rJMSF038M18+          TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
rJMSF012O23+          TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
rJMSF001E19+          TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
rJMSF018I15+          TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
rJMSF039M18+          TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
rJMFF011A22+          TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
rJMFF044O24+          TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
                      ____________________________________________________________
consensus             TACAGGAGGAGAATTTGTCCGCAATGAACACAGATCCTTGGTATTCTGCTTACCATTATT
 
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rJMSF029B05+          CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGACT
rJMSF038M18+          CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGACT
rJMSF012O23+          CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGACT
rJMSF001E19+          CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGACT
rJMSF018I15+          CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGACT
rJMSF039M18+          CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGANT
rJMFF011A22+          CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGACT
rJMFF044O24+          CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGACT
rJMFF047O08+                                   GGCTGCGATTGATGAACCCGATAAAAAGACAGACT
                      ____________________________________________________________
consensus             CTCATCCTCCCCTAGTTGAAAGATTGGCTGCGATTGATGAACCCGATAAAAAGACAGACT
 
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rJMSF029B05+          GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
rJMSF038M18+          GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
rJMSF012O23+          GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
rJMSF001E19+          GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
rJMSF018I15+          GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
rJMSF039M18+          GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
rJMFF011A22+          GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
rJMFF044O24+          GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
rJMFF047O08+          GATGAGTGNAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
                      ____________________________________________________________
consensus             GATGAGTTGAGCAACCTCATGCTCCCGGAGTTCACTTGAATACTTGGGTTGGAAGTTGGA
 
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rJMSF029B05+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
rJMSF038M18+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
rJMSF012O23+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
rJMSF001E19+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
rJMSF018I15+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
rJMSF039M18+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
rJMFF011A22+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
rJMFF044O24+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
rJMFF047O08+          ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
                      ____________________________________________________________
consensus             ACACTACAATCAGTAAAAACACTAGGTCCAAGTTTCCTTCCCATGGTAAAATATTCAAGT
 
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rJMSF029B05+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
rJMSF038M18+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
rJMSF012O23+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
rJMSF001E19+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
rJMSF018I15+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
rJMSF039M18+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
rJMFF011A22+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
rJMFF044O24+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
rJMFF047O08+          ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
                      ____________________________________________________________
consensus             ATTAACAAAGTCATACCCGTGTTACATTACTCATCTGTATGTTTAAGCAGTAACTGTTTC
 
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rJMSF029B05+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
rJMSF038M18+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
rJMSF012O23+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
rJMSF001E19+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
rJMSF018I15+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
rJMSF039M18+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
rJMFF011A22+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
rJMFF044O24+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
rJMFF047O08+          CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
                      ____________________________________________________________
consensus             CATTTTGTCATCACGGTGCAGTTCAGGTAAAAACTTGCCTCTTGCAGGCTGGCTAAACTT
 
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rJMSF029B05+          ATTCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAAT           
rJMSF038M18+          ATTCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAATTCTAAGCTAAA
rJMSF012O23+          ATTCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAATTCTAAGCTAAA
rJMSF001E19+          ATTCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAATTCTAAGCTAAA
rJMSF018I15+          ATTCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAATTCTAAGCTAAA
rJMSF039M18+          ANTCCTNCAAA                                                 
rJMFF011A22+          ATTCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAATTCTAAGCTAAA
rJMFF044O24+          ATCCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAATTCTAAGCTAAA
rJMFF047O08+          ATCCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAATTCTAAGCTAAA
                      ____________________________________________________________
consensus             ATTCCTGCAAAGTGTAACCACAACCGTTTGTAATGAGTCGGATTCAAATTCTAAGCTAAA
 
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rJMSF038M18+          CTGGCAACTCTGCAGGATTGG                                       
rJMSF012O23+          CTGGCAACTCTGCAGGAT                                          
rJMSF001E19+          CTGGCAACTCTGCAGGATTGGTGTATT                                 
rJMSF018I15+          CTGGCAACTCTGCAGGATTGGTGTATTTGTTAGAAAAAG                     
rJMFF011A22+          CTGGCAACTCTGCAGGATTGGTGTATTTGTTAGAAAAAG                     
rJMFF044O24+          CTGGCAACTCTGCAGGATTGGTGTATTTGTTAGAAAAAGAAAAGTTTCTTATTCTATTCT
rJMFF047O08+          CTGGCAACTCTGCAGGATTGGTGTATTTGTTAGAAAAAGAAAAGTTTCTTATTCTATTCT
                      ____________________________________________________________
consensus             CTGGCAACTCTGCAGGATTGGTGTATTTGTTAGAAAAAGAAAAGTTTCTTATTCTATTCT