Contig 008363:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047A14Sequence409008363 (6)emb|CBI21022.3|2e-69unnamed protein product [Vitis vinifera]370008363 (6)
JMFS119E09Sequence616008363 (6)emb|CDP13493.1|7e-102unnamed protein product [Coffea canephora]
JMSF018A17Sequence237008363 (6)emb|CDP13493.1|3e-30unnamed protein product [Coffea canephora]748008363 (6)emb|CAA67107.1|1e-78mitochondrial energy transfer protein [Solanum tuberosum]
JMSF018G01Sequence236014634747008363 (6)emb|CAA67107.1|1e-78mitochondrial energy transfer protein [Solanum tuberosum]

Alignment

This contig is upended


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JMFS119E09-                                               GGGACGAGAACGGGCCGGGCTTCA
                      ____________________________________________________________
consensus                                                 GGGACGAGAACGGGCCGGGCTTCA
 
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JMFS119E09-           AGCTCCCCCCCAATTTCGATTTGTACGCCAAATACTTCTCATCACTTGAGGGGTTTAAGA
                      ____________________________________________________________
consensus             AGCTCCCCCCCAATTTCGATTTGTACGCCAAATACTTCTCATCACTTGAGGGGTTTAAGA
 
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JMSF018A17-                            GAGGAAGTGGCTGCGAGGAAGAAGAAACCTAGGCTCAAGCTTA
JMFS119E09-           TTCTTGGCAATTCCGAGGAGGAAGTGGCTGCGAGGAAGAAGAAACCTAGGCTCAAGCTTA
                      ____________________________________________________________
consensus             TTCTTGGCAATTCCGAGGAGGAAGTGGCTGCGAGGAAGAAGAAACCTAGGCTCAAGCTTA
 
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JMSF018A17-           AGGTTAAGGTTTCGAATCCTTCATTGAGGAGGTTGATAAGTGGTGCAATTGCAGGGGCAG
JMFS119E09-           AGGTTAAGGTTTCGAATCCTTCATTGAGGAGGTTGATAAGTGGTGCAATTGCAGGGGCAG
                      ____________________________________________________________
consensus             AGGTTAAGGTTTCGAATCCTTCATTGAGGAGGTTGATAAGTGGTGCAATTGCAGGGGCAG
 
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JMSF018A17-           TTTCAAGAACTGCTGTAGCTCCATTGGAGACCATTAGGACTCATTTGATGGTTGGGAGTA
JMFS119E09-           TTTCAAGAACTGCTGTAGCTCCATTGGAGACCATTAGGACTCATTTGATGGTTGGGAGTA
                      ____________________________________________________________
consensus             TTTCAAGAACTGCTGTAGCTCCATTGGAGACCATTAGGACTCATTTGATGGTTGGGAGTA
 
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JMSF018A17-           GTGGGCATTCGACAACCGAGGTGTTCCACTCTATAATGGCACATGAAGGGTGGACTGGAT
JMFS119E09-           GTGGGCATTCGACAACCGAGGTGTTCCACTCTATAATGGCACATGAAGGGTGGACTGGAT
                      ____________________________________________________________
consensus             GTGGGCATTCGACAACCGAGGTGTTCCACTCTATAATGGCACATGAAGGGTGGACTGGAT
 
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JMSF018A17-           TGTTTAGGGGTAAT                                              
JMFS119E09-           TGTTTAGGGGTAATTTGGTTAATGTGATTCGTGTCGCCCCTAGCAAGGCCATTGAGCTTT
                      ____________________________________________________________
consensus             TGTTTAGGGGTAATTTGGTTAATGTGATTCGTGTCGCCCCTAGCAAGGCCATTGAGCTTT
 
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JMFS119E09-           TTGCTTACGACACGGTTAATAAGAACTTGTCGTCCAAACCCGGTGAGCAGCCTAAACTTC
                      ____________________________________________________________
consensus             TTGCTTACGACACGGTTAATAAGAACTTGTCGTCCAAACCCGGTGAGCAGCCTAAACTTC
 
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JMFS119E09-           CGATCCCCGCTTCGTTAGTTGCGGGAGCGTGTGCTGGTGTAAGTTCAACATTGGTGACAT
                      ____________________________________________________________
consensus             CGATCCCCGCTTCGTTAGTTGCGGGAGCGTGTGCTGGTGTAAGTTCAACATTGGTGACAT
 
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JMFS119E09-           ATCCTCTTGAATTGGTCAAGACCCGACTAACAATCCAGAGAGGAGTTTACGAAGGTCTAC
JMFF047A14-                                                                  TCTAC
rJMSF018G01+                                                                 TCTAC
rJMSF018A17+                                                                 TCTAC
                      ____________________________________________________________
consensus             ATCCTCTTGAATTGGTCAAGACCCGACTAACAATCCAGAGAGGAGTTTACGAAGGTCTAC
 
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JMFS119E09-           TCGATGCATTCGTAAAAATATTGAAAGAGGGGGGCGTGAGAGAGCTCTACCG        
JMFF047A14-           TCGATGCATTCGTAAAAATATTGAAAGAGGGGGGCGTGAGAGAGCTCTACCGGGGTCTCA
rJMSF018G01+          TCGATGCATTCGTAAAAATATTGAAAGAGGGGGGCGTGAGAGAGCTCTACCGGGGTCTCA
rJMSF018A17+          TCGATGCATTCGTAAAAATATTGAAAGAGGGGGGCGTGAGAGAGCTCTACCGGGGTCTCA
                      ____________________________________________________________
consensus             TCGATGCATTCGTAAAAATATTGAAAGAGGGGGGCGTGAGAGAGCTCTACCGGGGTCTCA
 
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JMFF047A14-           CCCCGAGTTTAATCGGAGTGATTCCATATGCTGCGACGAACTACTTCGCGTATGACACAC
rJMSF018G01+          CCCCGAGTTTAATCGGAGTGATTCCATATGCTGCGACGAACTACTTCGCGTATGACACAC
rJMSF018A17+          CCCCGAGTTTAATCGGAGTGATTCCATATGCTGCGACGAACTACTTCGCGTATGACACAC
                      ____________________________________________________________
consensus             CCCCGAGTTTAATCGGAGTGATTCCATATGCTGCGACGAACTACTTCGCGTATGACACAC
 
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JMFF047A14-           TGCGAAAATCCTACACGAAATTCTTCAAACAAGAGAGAATCGGCAACATCGAGACCCTTT
rJMSF018G01+          TGCGAAAATCCTACACGAAATTCTTCAAACAAGAGAGAATCGGCAACATCGAGACCCTTT
rJMSF018A17+          TGCGAAAATCCTACACGAAATTCTTCAAACAAGAGAGAATCGGCAACATCGAGACCCTTT
                      ____________________________________________________________
consensus             TGCGAAAATCCTACACGAAATTCTTCAAACAAGAGAGAATCGGCAACATCGAGACCCTTT
 
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JMFF047A14-           TGATCGGGTCCATGGCGGGAGCTATATCCAGCAGCGCCACGTTCCCTCTAGAAGTGGCCC
rJMSF018G01+          TGATCGGGTCCATGGCGGGAGCTATATCCAGCAGCGCCACGTTCCCTCTAGAAGTGGCCC
rJMSF018A17+          TGATCGGGTCCATGGCGGGAGCTATATCCAGCAGCGCCACGTTCCCTCTAGAAGTGGCCC
                      ____________________________________________________________
consensus             TGATCGGGTCCATGGCGGGAGCTATATCCAGCAGCGCCACGTTCCCTCTAGAAGTGGCCC
 
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JMFF047A14-           GTAAGCACATGCAGGTAGGGGCGGTTAGCGGGAGGCAAGTATACAAGAACGTGATTCATG
rJMSF018G01+          GTAAGCACATGCAGGTAGGGGCGGTTAGCGGGAGGCAAGTATACAAGAACGTGATTCATG
rJMSF018A17+          GTAAGCACATGCAGGTAGGGGCGGTTAGCGGGAGGCAAGTATACAAGAACGTGATTCATG
                      ____________________________________________________________
consensus             GTAAGCACATGCAGGTAGGGGCGGTTAGCGGGAGGCAAGTATACAAGAACGTGATTCATG
 
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JMFF047A14-           CCCTCGCCACCATCCTCGAACAGGAAGGTATCCCGGGATTGTACAAAGGGCTCGGGCCCA
rJMSF018G01+          CCCTCGCCACCATCCTCGAACAGGAAGGTATCCCGGGATTGTACAAAGGGCTCGGGCCCA
rJMSF018A17+          CCCTCGCCACCATCCTCGAACAGGAAGGTATCCCGGGATTGTACAAAGGGCTCGGGCCCA
                      ____________________________________________________________
consensus             CCCTCGCCACCATCCTCGAACAGGAAGGTATCCCGGGATTGTACAAAGGGCTCGGGCCCA
 
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JMFF047A14-           GCTGCATGAAGCTGGTGCCGGCTGCCGGGATTTCTTTCAT                    
rJMSF018G01+          GCTGCATGAAGCTGGTGCCGGCTGCCGGGATTTCTTTCATGTGTTATGAAGCGTGCAAGA
rJMSF018A17+          GCTGCATGAAGCTGGTGCCGGCTGCCGGGATTTCTTTCATGTGTTATGAAGCGTGCAAGA
rJMFF047A14+                                                         GAAGCGTGCAAGA
                      ____________________________________________________________
consensus             GCTGCATGAAGCTGGTGCCGGCTGCCGGGATTTCTTTCATGTGTTATGAAGCGTGCAAGA
 
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rJMSF018G01+          GGATATTGGTAGAGAAAGACAACGAGGAGTAGAAGAGCTTCTTACGGTACGAGACACACA
rJMSF018A17+          GGATATTGGTAGAGAAAGACAACGAGGAGTAGAAGAGCTTCTTACGGTACGAGACACACA
rJMFF047A14+          GGATATTGGTAGAGAAAGACAACGAGGAGTAGAAGAGCTTCTTACGGTACGAGACACACA
                      ____________________________________________________________
consensus             GGATATTGGTAGAGAAAGACAACGAGGAGTAGAAGAGCTTCTTACGGTACGAGACACACA
 
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rJMSF018G01+          TAAGGTAGATTGATTGAAGTTCATTAGCGTCTTGCATTTGTTTACGTTACAGCACTTCAC
rJMSF018A17+          TAAGGTAGATTGATTGAAGTTCATTAGCGTCTTGCATTTGTTTACGTTACAGCACTTCAC
rJMFF047A14+          TAAGGT--ATTGATTGAAGTTCATTAGCGTCTTGCATTTGTTTACGTTACAGCACTTCAC
                      ____________________________________________________________
consensus             TAAGGTAGATTGATTGAAGTTCATTAGCGTCTTGCATTTGTTTACGTTACAGCACTTCAC
 
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rJMSF018G01+          TATCCTGACCCCCCGGTGTTGAGCAACATAACGTTACCCCGGGAAGTTGTTAAGTAGCAT
rJMSF018A17+          TATCCTGACCCCCCGGTGTTGAGCAACATAACGTTACCCCGGGAAGTTGTTAAGTAGCAT
rJMFF047A14+          TATCCTGACCCCCCGGTGTTGAGCAACATAACGTTACCCCGGGAAGTTGTTAAGTAGCAT
                      ____________________________________________________________
consensus             TATCCTGACCCCCCGGTGTTGAGCAACATAACGTTACCCCGGGAAGTTGTTAAGTAGCAT
 
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rJMSF018G01+          TTGCTGTTTCTTCTAAGTCAAGAAATTACATCTGATTGCAAAGAAATTTTGGAGACAATA
rJMSF018A17+          TTGCTGTTTCTTCTAAGTCAAGAAATTACATCTGATTGCAAAGAAATTTTGGAGACAATA
rJMFF047A14+          TTGCTGTTTCTTCTAAGTCAAGAAATTACATCTGATTGCAAAGAAATTTTTGAGACAATA
                      ____________________________________________________________
consensus             TTGCTGTTTCTTCTAAGTCAAGAAATTACATCTGATTGCAAAGAAATTTTGGAGACAATA
 
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rJMSF018G01+          AGGGGAGATGAATGGTTTTAAGTTTGTGCAAATCACAGAATTGGTATTTTACCAAGTGAA
rJMSF018A17+          AGGGGAGATGAATGGTTTTAAGTTTGTGCAAATCACAGAATTGGTATTTTACCAAGTGAA
rJMFF047A14+          AGGGGAGATGAATGGTTTTAAGTTTGTGCAAATCACAGAATTGGTATTTTA-CAAGTGAA
                      ____________________________________________________________
consensus             AGGGGAGATGAATGGTTTTAAGTTTGTGCAAATCACAGAATTGGTATTTTACCAAGTGAA
 
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rJMSF018G01+          ATTGTATCAATTTTGTT                                           
rJMSF018A17+          ATTGTATCAATTTTGTT                                           
rJMFF047A14+          ATTGTATCAATTTTGTTTATCCCAATTTGTTATGATGGAATGGAATCCCCCAATTTCAGG
                      ____________________________________________________________
consensus             ATTGTATCAATTTTGTTTATCCCAATTTGTTATGATGGAATGGAATCCCCCAATTTCAGG