| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF032O18 | Sequence | 570 | 004658 (3) | gb|ACJ84811.1| | 4e-102 | unknown [Medicago truncatula] | 813 | 008362 (3) | ref|XP_009765027.1| | 5e-144 | PREDICTED: 26S protease regulatory subunit S10B homolog B [Nicotiana sylvestris |
| JMFF032O21 | Sequence | 598 | 004658 (3) | gb|ACJ84811.1| | 3e-98 | unknown [Medicago truncatula] | 725 | 008362 (3) | gb|KJB59782.1| | 7e-108 | hypothetical protein B456_009G271600 [Gossypium raimondii] gb|KJB59783.1| hypoth |
| JMFF046O06 | Sequence | 541 | 004658 (3) | gb|ACJ84811.1| | 1e-81 | unknown [Medicago truncatula] | 505 | 008362 (3) | gb|AFK35582.1| | 5e-44 | unknown [Medicago truncatula] |
This contig is upended
. : . : . : . : . : . :
rJMFF032O18+ A
____________________________________________________________
consensus A
. : . : . : . : . : . :
rJMFF032O18+ TTGCAAGTAACATAGATGCTAATTTCTTGAAGGTNGTATCAAGTGCCATTATAGATAAGT
____________________________________________________________
consensus TTGCAAGTAACATAGATGCTAATTTCTTGAAGGTNGTATCAAGTGCCATTATAGATAAGT
. : . : . : . : . : . :
rJMFF032O18+ ACATAGGTGAGAGTGCAAGGTTGATCAGAGAAATGTTTAACTATGCTCGTGATCATCAGC
____________________________________________________________
consensus ACATAGGTGAGAGTGCAAGGTTGATCAGAGAAATGTTTAACTATGCTCGTGATCATCAGC
. : . : . : . : . : . :
rJMFF032O18+ CATGCATCATATTTATGGATGAGATTGATGCAATCGGTGGGCGACGTTTTAGTGAAGGAA
rJMFF032O21+ TGGATGAGATTGATGCAATCGGTGGGCGACGTTTTAGTGAAGGAA
____________________________________________________________
consensus CATGCATCATATTTATGGATGAGATTGATGCAATCGGTGGGCGACGTTTTAGTGAAGGAA
. : . : . : . : . : . :
rJMFF032O18+ CAAGTGCTGACCGCGAAATTCAAAGAACGCTTATGGAATTGCTTAACCAATTGGATGGAT
rJMFF032O21+ CAAGTGCTGACCGCGAAATTCAAAGAACGCTTATGGAATTGCTTAACCAATTGGATGGAT
____________________________________________________________
consensus CAAGTGCTGACCGCGAAATTCAAAGAACGCTTATGGAATTGCTTAACCAATTGGATGGAT
. : . : . : . : . : . :
rJMFF032O18+ TTGACCAGCTTGGGAAGGTAAAAATGATCATGGCAACTAATAGACCTGATGTTCTGGACC
rJMFF032O21+ TTGACCAGCTTGGGAAGGTAAAAATGATCATGGCAACTAATAGACCTGATGTTCTGGACC
____________________________________________________________
consensus TTGACCAGCTTGGGAAGGTAAAAATGATCATGGCAACTAATAGACCTGATGTTCTGGACC
. : . : . : . : . : . :
rJMFF032O18+ CAGCTCTTCTTCGTCCTGGTCGATTAGATAGGAAAATAGAGATCGCGCTACCTAATGAAC
rJMFF032O21+ CAGCTCTTCTTCGTCCTGGTCGATTAGATAGGAAAATAGAGATCGCGCTACCTAATGAAC
____________________________________________________________
consensus CAGCTCTTCTTCGTCCTGGTCGATTAGATAGGAAAATAGAGATCGCGCTACCTAATGAAC
. : . : . : . : . : . :
rJMFF032O18+ AATCAAGAATGGAGATACTCAAGATCCATGCTTCTGGGATTGCCAAGCATGGTGAAATTG
rJMFF032O21+ AATCAAGAATGGAGATACTCAAGATCCATGCTTCTGGGATTGCCAAGCATGGTGAAATTG
rJMFF046O06+ GGGATTGCCAAGCATGGTGAAATTG
____________________________________________________________
consensus AATCAAGAATGGAGATACTCAAGATCCATGCTTCTGGGATTGCCAAGCATGGTGAAATTG
. : . : . : . : . : . :
rJMFF032O18+ ACTATGAAGCTGTTGTTAAGCTTGCTGAGGGCTTCAATGGAGCTGATCTTCGCAATGTTT
rJMFF032O21+ ACTATGAAGCTGTTGTTAAGCTTGCTGAGGGCTTCAATGGAGCTGATCTTCGCAATGTTT
rJMFF046O06+ ACTATGAAGCTGTTGTTAAGCTTGCTGAGGGCTTCAATGGAGCTGATCTTCGCAATGTTT
____________________________________________________________
consensus ACTATGAAGCTGTTGTTAAGCTTGCTGAGGGCTTCAATGGAGCTGATCTTCGCAATGTTT
. : . : . : . : . : . :
rJMFF032O18+ GCACTGAAGCTGGCATGTCTGCAATTCGTGCAGAGCGTGATTACGTCATCCATGAAGATT
rJMFF032O21+ GCACTGAAGCTGGCATGTCTGCAATTCGTGCAGAGCGTGATTACGTCATCCATGAAGATT
rJMFF046O06+ GCACTGAAGCTGGCATGTCTGCAATTCGTGCAGAGCGTGATTACGTCATCCATGAAGATT
____________________________________________________________
consensus GCACTGAAGCTGGCATGTCTGCAATTCGTGCAGAGCGTGATTACGTCATCCATGAAGATT
. : . : . : . : . : . :
rJMFF032O18+ TCATGAAGGCTGTAAGGAAACTGAATGAAGCAAAGAAACTTGAATCAAGTGCTCACTACA
rJMFF032O21+ TCATGAAGGCTGTAAGGAAACTGAATGAAGCAAAGAAACTTGAATCAAGTGCTCACTACA
rJMFF046O06+ TCATGAAGGCTGTAAGGAAACTGAATGAAGCAAAGAAACTTGAATCAAGTGCTCACTACA
____________________________________________________________
consensus TCATGAAGGCTGTAAGGAAACTGAATGAAGCAAAGAAACTTGAATCAAGTGCTCACTACA
. : . : . : . : . : . :
rJMFF032O18+ GTGCTGATTTCGGAAAAGAATAAGCAATATTGTATTGTAGGGAAGGAGGCATGGAAGAGT
rJMFF032O21+ GTGCTGATTTCGGAAAAGAATAAGCAATATTGTATTGTAGGGAAGGAGGCATGGAAGAGT
rJMFF046O06+ GTGCTGATTTCGGAAAAGAATAAGCAATATTGTATTGTAGGGAAGGAGGCATGGAAGAGT
____________________________________________________________
consensus GTGCTGATTTCGGAAAAGAATAAGCAATATTGTATTGTAGGGAAGGAGGCATGGAAGAGT
. : . : . : . : . : . :
rJMFF032O18+ CAGTGTGATGTAGTTGTCTGAGGAGAAGCATTGCTATTCCAATTGGATATTTGATTGTTT
rJMFF032O21+ CAGTGTGATGTAGTTGTCTGAGGAGAAGCATTGCTATTCCAATTGGATATTTGATTGTTT
rJMFF046O06+ CAGTGTGATGTAGTTGTCTGAGGAGAAGCATTGCTATTCCAATTGGATATTTGATTGTTT
____________________________________________________________
consensus CAGTGTGATGTAGTTGTCTGAGGAGAAGCATTGCTATTCCAATTGGATATTTGATTGTTT
. : . : . : . : . : . :
rJMFF032O18+ GATTGTTGACACAATTTGTTTCCCTTTATTCTTTTATGCAGAATTTTGTATCATTTACAC
rJMFF032O21+ GATTGTTGACACAATTTGTTTCCCTTTATTCTTTTATGCAGAATTTTGTATCATTTACAC
rJMFF046O06+ GATTGTTGACACAATTTGTTTCCCTTTATTCTTTTATGCAGAATTTTGTATCATTTACAC
____________________________________________________________
consensus GATTGTTGACACAATTTGTTTCCCTTTATTCTTTTATGCAGAATTTTGTATCATTTACAC
. : . : . : . : . : . :
rJMFF032O18+ ACTGCCTCCTGTTATTGTGAAAATAATCAATC
rJMFF032O21+ ACTGCCTCCTGTTATTGTGAAAATAATCAATCACCTACACTTCCCACCATTTCACTTTCG
rJMFF046O06+ ACTGCCTCCTGTTATTGTGAAAATAATCAATCACCTACACTTCCCACCATTTCACTTTCG
____________________________________________________________
consensus ACTGCCTCCTGTTATTGTGAAAATAATCAATCACCTACACTTCCCACCATTTCACTTTCG
. : . : . : . : . : . :
rJMFF032O21+ AGATGTGTATGTTGACACTG
rJMFF046O06+ AGATGTGTATGTTGACACTGAATATTTTTGAGTATTAAAATATTTAAATACATTTTGGTT
____________________________________________________________
consensus AGATGTGTATGTTGACACTGAATATTTTTGAGTATTAAAATATTTAAATACATTTTGGTT