Contig 008360:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019E22Sequence351008360 (2)ref|XP_010070273.1|101PREDICTED: uncharacterized protein LOC104457042 [Eucalyptus grandis]
JMFF046J14Sequence480014246emb|CDP03587.1|7e-21unnamed protein product [Coffea canephora]416008360 (2)ref|XP_011016806.1|131PREDICTED: uncharacterized protein LOC105120338, partial [Populus euphratica]

Alignment

This contig is upended


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rJMFF019E22+           TGATGCCAAAGATTTGGGCGGCGAATGTGAGTCTGTNGTCGTGATTGCCAAAGGACNGA
rJMFF046J14+             ATGCCAAAGATTTTGGCGGCGAATGTGAGTCTGTCGTCGTGATTGCCAAAGGACAGA
                      ____________________________________________________________
consensus              TGATGCCAAAGATTTTGGCGGCGAATGTGAGTCTGTCGTCGTGATTGCCAAAGGACAGA
 
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rJMFF019E22+          GTGTACNGGGNACATGTAAGTATGGAACNCGAGTGGATTATATNCTGGCTTCACCACATT
rJMFF046J14+          GTGTACAGGGAACATGTAAGTATGGAACACGAGTGGATTATATACTGGCTTCACCACATT
                      ____________________________________________________________
consensus             GTGTACAGGGAACATGTAAGTATGGAACACGAGTGGATTATATACTGGCTTCACCACATT
 
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rJMFF019E22+          NGTCGTTCAAGTTTNTGCAAGNATCNTACTCNGTTCTCTNTTNCAAGGGAACTTCGGATC
rJMFF046J14+          CGTCGTTCAAGTTTGTGCAAGGATCCTACTCGGTTCTCTCTTCCAAGGGAACTTCGGATC
                      ____________________________________________________________
consensus             CGTCGTTCAAGTTTGTGCAAGGATCCTACTCGGTTCTCTCTTCCAAGGGAACTTCGGATC
 
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rJMFF019E22+          ATCACATAGTGAAAGTTGACGTGGTTAAAGTAGACGAGGAGGAGGAGCGTCAGCAATGNG
rJMFF046J14+          ATCACATAGTGAAAGTTGACGTGGTTAAAGTAGACGAGGAGGAGGAGCGTCAGCAATGTG
                      ____________________________________________________________
consensus             ATCACATAGTGAAAGTTGACGTGGTTAAAGTAGACGAGGAGGAGGAGCGTCAGCAATGTG
 
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rJMFF019E22+          TTGATAGCAGTAACAAGCGGCCAGCCAAGAAGAAAGNNGTAAAGANTACAGATCNTAATT
rJMFF046J14+          TTGATAGCAGTAACAAGCGGCCAGCCAAGAAGAAAGTTGTAAAGATTACAGATCCTAATT
                      ____________________________________________________________
consensus             TTGATAGCAGTAACAAGCGGCCAGCCAAGAAGAAAGTTGTAAAGATTACAGATCCTAATT
 
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rJMFF019E22+          CTTCAAAGGGTTTACTGGAAAATACATACATAACATTCCTAATGGAAAATTT        
rJMFF046J14+          CTTCAAAGGGTTTA-TGGAAAATACATACATAACATTCCTAATGGAAAATTTTTGTTTTG
                      ____________________________________________________________
consensus             CTTCAAAGGGTTTACTGGAAAATACATACATAACATTCCTAATGGAAAATTTTTGTTTTG
 
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rJMFF046J14+          TTTTGTTTTTTCACTGCTCTGTATTGGTCTGTAAAGCATTACTAATCTTTCACTCCTATT
                      ____________________________________________________________
consensus             TTTTGTTTTTTCACTGCTCTGTATTGGTCTGTAAAGCATTACTAATCTTTCACTCCTATT