Contig 008355:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046D17Sequence537008897 (2)493008355 (3)gb|ABC68428.1|2e-09putative protein phosphatase 2C [Tragopogon pratensis] gb|ADE06483.1| putative p
JMFF050L18Sequence636008897 (2)597008355 (3)emb|CBI28905.3|4e-28unnamed protein product [Vitis vinifera]
JMSF053M01Sequence602017973ref|XP_006428606.1|6e-71hypothetical protein CICLE_v100115762mg, partial [Citrus clementina] ref|XP_0064905008355 (3)ref|XP_009416608.1|4e-89PREDICTED: probable protein phosphatase 2C 33 [Musa acuminata subsp. malaccensi

Alignment

This contig is upended


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rJMSF053M01+                      GACAACAGCTGTAACTCTTTTGAAACCAGGGCCAGAATCTTGTAATTG
                      ____________________________________________________________
consensus                         GACAACAGCTGTAACTCTTTTGAAACCAGGGCCAGAATCTTGTAATTG
 
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rJMSF053M01+          CGAATGTTGGAGATTCTAGAGCTGTATTGGGTACAAGAGATAATGAAAATTCTCTTACTG
                      ____________________________________________________________
consensus             CGAATGTTGGAGATTCTAGAGCTGTATTGGGTACAAGAGATAATGAAAATTCTCTTACTG
 
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rJMSF053M01+          CTGTACAATTGACTGTGGATCTCAAACCTAATCTTCCAGTGGAAGCAGAGAGGATTCGTA
                      ____________________________________________________________
consensus             CTGTACAATTGACTGTGGATCTCAAACCTAATCTTCCAGTGGAAGCAGAGAGGATTCGTA
 
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rJMSF053M01+          AGTGTAAAGGGCGTGTATTTGCTCTTCGCGAGGAACCCGAGGTTGCAAGAGTGTGGCTAC
                      ____________________________________________________________
consensus             AGTGTAAAGGGCGTGTATTTGCTCTTCGCGAGGAACCCGAGGTTGCAAGAGTGTGGCTAC
 
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rJMSF053M01+          CAAATACCAACTTCCCTGGTCTTGCCATGTCACGTGCTCTTGGAGATTTTTGCCTAAAGG
                      ____________________________________________________________
consensus             CAAATACCAACTTCCCTGGTCTTGCCATGTCACGTGCTCTTGGAGATTTTTGCCTAAAGG
 
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rJMSF053M01+          GTTTCGGTGTCATATCCGTGCCAGAAGTTTCATATAGACGCCTAACGGAGAAAGATGAAT
rJMFF050L18+                                                           GAAAGATGAAT
                      ____________________________________________________________
consensus             GTTTCGGTGTCATATCCGTGCCAGAAGTTTCATATAGACGCCTAACGGAGAAAGATGAAT
 
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rJMSF053M01+          TTATCGTCTTGGCAACAGACGGGATCTGGGACGTGCTTTGTAACGAAGAGGTCGTAAAGA
rJMFF050L18+          TTATCGTCTTGGCAACAGACGGGATCTGGGACGTGCTTTGTAACGAAGAGGTCGTAAAGA
                      ____________________________________________________________
consensus             TTATCGTCTTGGCAACAGACGGGATCTGGGACGTGCTTTGTAACGAAGAGGTCGTAAAGA
 
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rJMSF053M01+          TTGTGGCTTCGGCCCCTACACGTTCATCCGCAGCAAAAACGCTCGTTGAAGCAGCGGTTA
rJMFF050L18+          TTGTGGCTTCGGCCCCTACACGTTCATCCGCAGCAAAAACGCTCGTTGAAGCAGCGGTTA
rJMFF046D17+                                                         GAAGCAGCGGTTA
                      ____________________________________________________________
consensus             TTGTGGCTTCGGCCCCTACACGTTCATCCGCAGCAAAAACGCTCGTTGAAGCAGCGGTTA
 
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rJMSF053M01+          GAGGGTGGAAGACCAAATACCCGACTTCCAGAACAGATGATTGTGCAGTGGTCTGCCTCT
rJMFF050L18+          GAGGGTGGAAGACCAAATACCCGACTTCCAGAACAGATGATTGTGCAGTGGTCTGCCTCT
rJMFF046D17+          GAGGGTGGAAGACCAAATACCCGACTTCCAGAACAGATGATTGTGCAGTGGTCTGCCTCT
                      ____________________________________________________________
consensus             GAGGGTGGAAGACCAAATACCCGACTTCCAGAACAGATGATTGTGCAGTGGTCTGCCTCT
 
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rJMSF053M01+          TTCTTAAAGGTTTCTCAGTGGGAGAGAATGAAGTTAACGGTGAGAAGGTGGATGCATCTA
rJMFF050L18+          TTCTTAAAGGTTTCTCAGTGGGAGAGAATGAAGTTAACGGTGAGAAGGTGGATGCATCTA
rJMFF046D17+          TTCTTAAAGGTTTCTCAGTGGGAGAGAATGAAGTTAACGGTGAGAAGGTGGATGCATCTA
                      ____________________________________________________________
consensus             TTCTTAAAGGTTTCTCAGTGGGAGAGAATGAAGTTAACGGTGAGAAGGTGGATGCATCTA
 
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rJMSF053M01+          CTATTCCAGCAGAAATGAATGGTTCCGACGCCACTGGAAATGACGAAAATGCCCTCGGGG
rJMFF050L18+          CTATTCCAGCAGAAATGAATGGTTCCGACGCCACTGGAAATGACGAAAATGCCCTCGGGG
rJMFF046D17+          CTATTCCAGCAGAAATGAATGGTTCCGACGCCACTGGAAATGACGAAAATGCCCTCGGGG
                      ____________________________________________________________
consensus             CTATTCCAGCAGAAATGAATGGTTCCGACGCCACTGGAAATGACGAAAATGCCCTCGGGG
 
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rJMSF053M01+          CCGAAAGCAACAAAGAACAGGGGAAAAAAGACTGGTCTTCATCACTTTAGGTTTGTTCTG
rJMFF050L18+          CCGAAAGCAACAAAGAACAGGGGAAAAAAGACTGGTCTTCATCACTTTAGGTTTGTTCTG
rJMFF046D17+          CCGAAAGCAACAAAGAACAGGGGAAAAAAGACTGGTCTTCATCACTTTAGGTTTGTTCTG
                      ____________________________________________________________
consensus             CCGAAAGCAACAAAGAACAGGGGAAAAAAGACTGGTCTTCATCACTTTAGGTTTGTTCTG
 
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rJMSF053M01+          CACAAAATCTCTTTTTCTTTTTATGAGATGTGTTCCCAGCTGTATTAGTGTGTGGGGATC
rJMFF050L18+          CACAAAATCTCTTTTTCTTTTTATGAGATGTGTTCCCAGCTGTATTAGTGTGTGGGGATC
rJMFF046D17+          CACAAAATCTCTTTTTCTTTTTATGAGATGTGTTCCCAGCTGTATTAGTGTGTGGGGATC
                      ____________________________________________________________
consensus             CACAAAATCTCTTTTTCTTTTTATGAGATGTGTTCCCAGCTGTATTAGTGTGTGGGGATC
 
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rJMSF053M01+          CTTCTCTCTCTAGCGTGGGTAGAATTGGAATTTTGTAAAATCCTACTTGCCATTTGCTTT
rJMFF050L18+          CTTCTCTCTCTAGCGTGGGTAGAATTGGAATTTTGTAAAATCCTACTTGCCATTTGCTTT
rJMFF046D17+          CTTCTCTCTCTAGCGTGGGTAGAATTGGAATTTTGTAAAATCCTACTTGCCATTTGCTTT
                      ____________________________________________________________
consensus             CTTCTCTCTCTAGCGTGGGTAGAATTGGAATTTTGTAAAATCCTACTTGCCATTTGCTTT
 
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rJMSF053M01+          GATTCTTTCATGTGATTGATGTGTTTCTTGTGTTGTAATATTGGTGGATTTTTTAATTAT
rJMFF050L18+          GATTCTTTCATGTGATTGATGTGTTTCTTGTGTTGTAATATTGGTGTATTTTTTAATTAT
rJMFF046D17+          GATTCTTTCATGTGATTGATGTGTTTCTTGTGTTGTAATATTGGTGTATTTTTTAATTAT
                      ____________________________________________________________
consensus             GATTCTTTCATGTGATTGATGTGTTTCTTGTGTTGTAATATTGGTGTATTTTTTAATTAT
 
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rJMSF053M01+          TTTTTTTGAATGATGCG                                           
rJMFF050L18+          TTTTTTTGAATGATGCGGGAAAAAAAAAAAAAAAACTCTCCAGGGT              
rJMFF046D17+          TTTTTTTGAATGATGCGGGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTTTTTTGAATGATGCGGGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG