Contig 008354:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037B21Sequence438010911 (3)ref|XP_009796020.1|2e-53PREDICTED: A-kinase anchor protein 17A [Nicotiana sylvestris]306008354 (2)
JMFF046C16Sequence550010911 (3)ref|XP_009796020.1|4e-74PREDICTED: A-kinase anchor protein 17A [Nicotiana sylvestris]563008354 (2)emb|CDP01196.1|1e-35unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF046C16+ AGAAGAGGATGGACTGGACATTA
                      ____________________________________________________________
consensus AGAAGAGGATGGACTGGACATTA
 
. : . : . : . : . : . :
rJMFF046C16+ TTTCAGGACTCCAATGTAAGATTGTGGTTCGGTTCAAGAAGCACAATGACTTCTGCAATG
                      ____________________________________________________________
consensus TTTCAGGACTCCAATGTAAGATTGTGGTTCGGTTCAAGAAGCACAATGACTTCTGCAATG
 
. : . : . : . : . : . :
rJMFF046C16+ CTTTGAAGGCGTTATGTGGCCGTTCATTGCAAAAGCAAGGGTCACGTTTGCGAGCTGATT
                      ____________________________________________________________
consensus CTTTGAAGGCGTTATGTGGCCGTTCATTGCAAAAGCAAGGGTCACGTTTGCGAGCTGATT
 
. : . : . : . : . : . :
rJMFF037B21+ CTTCCGAAATGATGAAAGTCAAACAGGAGAAA
rJMFF046C16+ ATGATGTCACTTGGGATAAGGATGGATACTTCCGAAATGATGAAAGTCAAACAGGAGAAA
                      ____________________________________________________________
consensus ATGATGTCACTTGGGATAAGGATGGATACTTCCGAAATGATGAAAGTCAAACAGGAGAAA
 
. : . : . : . : . : . :
rJMFF037B21+ GAAATAGATGGGTGCCNGCAAGGGAAGCNCTGAATGAAAGAGATGAAGCACCTAGGAGTC
rJMFF046C16+ GGAATAGATGGGTGCCTGCAAGGGAAGCACTGAATGAAAGAGATGAAGCACCTAGGAGTC
                      ____________________________________________________________
consensus GGAATAGATGGGTGCCTGCAAGGGAAGCACTGAATGAAAGAGATGAAGCACCTAGGAGTC
 
. : . : . : . : . : . :
rJMFF037B21+ GATCACGCAACTTTAGTTATGAAGATGGCCGCAGAAAGAGATTTAAGGAATGATGCTTCA
rJMFF046C16+ GATCACGCAACTTTAGTTATGGAGATGGCCGCAGAAAGAGATTTAAGGAATGATGCTTCA
                      ____________________________________________________________
consensus GATCACGCAACTTTAGTTATGGAGATGGCCGCAGAAAGAGATTTAAGGAATGATGCTTCA
 
. : . : . : . : . : . :
rJMFF037B21+ AAATTCAAAATCTTAACCTGTGCAAGCTTAATATGGAAGTGGTTAGTATTTTTTGAAAAA
rJMFF046C16+ AAATTCAAAATCTTAACCTGTGCAAGCTTAATATGGAAGTGGTTAGTATTTTTTGAAAAA
                      ____________________________________________________________
consensus AAATTCAAAATCTTAACCTGTGCAAGCTTAATATGGAAGTGGTTAGTATTTTTTGAAAAA
 
. : . : . : . : . : . :
rJMFF037B21+ AAATTCCCCTTTGGATTCTTTTCAGCACCATTATACTTGTACTAGTAGTAATTGTACTAA
rJMFF046C16+ AAATTCCCCTTTGGATTCTTTTCAGCACCATTATACTTGTACTAGTAGTAATTGTACTAA
                      ____________________________________________________________
consensus AAATTCCCCTTTGGATTCTTTTCAGCACCATTATACTTGTACTAGTAGTAATTGTACTAA
 
. : . : . : . : . : . :
rJMFF037B21+ ATACTGATCCTGTATTGAACCATCTGCCAAGGAA
rJMFF046C16+ ATACTGATCCTGTATTGAACCATCTGCCAAGGAATTTTTTTACTTGGTTTGTCAAACAAG
                      ____________________________________________________________
consensus ATACTGATCCTGTATTGAACCATCTGCCAAGGAATTTTTTTACTTGGTTTGTCAAACAAG
 
. : . : . : . : . : . :
rJMFF046C16+ CAAATGACCTCACTTCTTTCTCGATXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
                      ____________________________________________________________
consensus CAAATGACCTCACTTCTTTCTCGATNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT