Contig 008354:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037B21Sequence438010911 (3)ref|XP_009796020.1|2e-53PREDICTED: A-kinase anchor protein 17A [Nicotiana sylvestris]306008354 (2)
JMFF046C16Sequence550010911 (3)ref|XP_009796020.1|4e-74PREDICTED: A-kinase anchor protein 17A [Nicotiana sylvestris]563008354 (2)emb|CDP01196.1|1e-35unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF046C16+                                               AGAAGAGGATGGACTGGACATTA
                      ____________________________________________________________
consensus                                                  AGAAGAGGATGGACTGGACATTA
 
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rJMFF046C16+          TTTCAGGACTCCAATGTAAGATTGTGGTTCGGTTCAAGAAGCACAATGACTTCTGCAATG
                      ____________________________________________________________
consensus             TTTCAGGACTCCAATGTAAGATTGTGGTTCGGTTCAAGAAGCACAATGACTTCTGCAATG
 
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rJMFF046C16+          CTTTGAAGGCGTTATGTGGCCGTTCATTGCAAAAGCAAGGGTCACGTTTGCGAGCTGATT
                      ____________________________________________________________
consensus             CTTTGAAGGCGTTATGTGGCCGTTCATTGCAAAAGCAAGGGTCACGTTTGCGAGCTGATT
 
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rJMFF037B21+                                      CTTCCGAAATGATGAAAGTCAAACAGGAGAAA
rJMFF046C16+          ATGATGTCACTTGGGATAAGGATGGATACTTCCGAAATGATGAAAGTCAAACAGGAGAAA
                      ____________________________________________________________
consensus             ATGATGTCACTTGGGATAAGGATGGATACTTCCGAAATGATGAAAGTCAAACAGGAGAAA
 
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rJMFF037B21+          GAAATAGATGGGTGCCNGCAAGGGAAGCNCTGAATGAAAGAGATGAAGCACCTAGGAGTC
rJMFF046C16+          GGAATAGATGGGTGCCTGCAAGGGAAGCACTGAATGAAAGAGATGAAGCACCTAGGAGTC
                      ____________________________________________________________
consensus             GGAATAGATGGGTGCCTGCAAGGGAAGCACTGAATGAAAGAGATGAAGCACCTAGGAGTC
 
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rJMFF037B21+          GATCACGCAACTTTAGTTATGAAGATGGCCGCAGAAAGAGATTTAAGGAATGATGCTTCA
rJMFF046C16+          GATCACGCAACTTTAGTTATGGAGATGGCCGCAGAAAGAGATTTAAGGAATGATGCTTCA
                      ____________________________________________________________
consensus             GATCACGCAACTTTAGTTATGGAGATGGCCGCAGAAAGAGATTTAAGGAATGATGCTTCA
 
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rJMFF037B21+          AAATTCAAAATCTTAACCTGTGCAAGCTTAATATGGAAGTGGTTAGTATTTTTTGAAAAA
rJMFF046C16+          AAATTCAAAATCTTAACCTGTGCAAGCTTAATATGGAAGTGGTTAGTATTTTTTGAAAAA
                      ____________________________________________________________
consensus             AAATTCAAAATCTTAACCTGTGCAAGCTTAATATGGAAGTGGTTAGTATTTTTTGAAAAA
 
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rJMFF037B21+          AAATTCCCCTTTGGATTCTTTTCAGCACCATTATACTTGTACTAGTAGTAATTGTACTAA
rJMFF046C16+          AAATTCCCCTTTGGATTCTTTTCAGCACCATTATACTTGTACTAGTAGTAATTGTACTAA
                      ____________________________________________________________
consensus             AAATTCCCCTTTGGATTCTTTTCAGCACCATTATACTTGTACTAGTAGTAATTGTACTAA
 
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rJMFF037B21+          ATACTGATCCTGTATTGAACCATCTGCCAAGGAA                          
rJMFF046C16+          ATACTGATCCTGTATTGAACCATCTGCCAAGGAATTTTTTTACTTGGTTTGTCAAACAAG
                      ____________________________________________________________
consensus             ATACTGATCCTGTATTGAACCATCTGCCAAGGAATTTTTTTACTTGGTTTGTCAAACAAG
 
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rJMFF046C16+          CAAATGACCTCACTTCTTTCTCGATXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
                      ____________________________________________________________
consensus             CAAATGACCTCACTTCTTTCTCGATNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT