Contig 008346:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015C08Sequence653000776 (5)ref|XP_004249537.1|2e-82PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi595008346 (5)ref|XP_009782347.1|3e-74PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMFF045H11Sequence638000776 (5)ref|XP_004249537.1|4e-98PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi604008346 (5)ref|XP_009782347.1|2e-61PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMSF013I16Sequence491000776 (5)ref|XP_004249537.1|1e-46PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi730008346 (5)ref|XP_009782347.1|1e-102PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMSF017N13Sequence250000776 (5)733008346 (5)ref|XP_010111450.1|8e-80hypothetical protein L484_021273 [Morus notabilis] gb|EXC30973.1| hypothetical p
JMSF026I03Sequence651000776 (5)ref|XP_004249537.1|2e-71PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi744008346 (5)ref|XP_009782347.1|3e-111PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF017N13+ GTTGGTTTGGTGCTGGTCGATATGAAGTGGA
rJMSF013I16+ GTTGNTTTGGTGCTGGTCGATATGAAGTGGA
rJMSF026I03+ ACCTTGCGGTTGGTTTGGTGCTGGTCGATATGAAGTGGA
                      ____________________________________________________________
consensus ACCTTGCGGTTGGTTTGGTGCTGGTCGATATGAAGTGGA
 
. : . : . : . : . : . :
rJMSF017N13+ TGGATATGTATACAATGCTGATGAAGAACCTAAAATTTTGATGAGTGGAAAGTGGAATGA
rJMSF013I16+ TGGATATGTATNCAATGCTGATGNAGAACCTAAAATTTTGATGAGTGGAAAGTGGAATGA
rJMSF026I03+ TGGATATGTATACAATGCTGATGAAGAACCTAAAATTTTGATGAGTGGAAAGTGGAATGA
                      ____________________________________________________________
consensus TGGATATGTATACAATGCTGATGAAGAACCTAAAATTTTGATGAGTGGAAAGTGGAATGA
 
. : . : . : . : . : . :
rJMSF017N13+ ATTTATGAGTTTTCAACCTTGTGATTCTGAAGGAGAACCCCTTCCGGGAACTGAAATGAA
rJMSF013I16+ ATTTATGAGTTTTCAACCTTGTGATTCNGAAGGAGAACCCCTTCCGGGAACTGAAATGAA
rJMSF026I03+ ATTTATGAGTTTTCAACCTTGTGATTCTGAAGGAGAACCCCTTCCGGGAACTGAAATGAA
rJMFF015C08+ GAAATGAA
rJMFF045H11+ TGAA
                      ____________________________________________________________
consensus ATTTATGAGTTTTCAACCTTGTGATTCTGAAGGAGAACCCCTTCCGGGAACTGAAATGAA
 
. : . : . : . : . : . :
rJMSF017N13+ AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
rJMSF013I16+ AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
rJMSF026I03+ AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
rJMFF015C08+ AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
rJMFF045H11+ AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
                      ____________________________________________________________
consensus AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
 
. : . : . : . : . : . :
rJMSF017N13+ CCACAAGATCAACAGTTTTGACACTGC-CCCAAAAAGTTACTGGCATCTGACTCTCGCTT
rJMSF013I16+ CCACAAGATCAACAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
rJMSF026I03+ CCACAAGATCAACAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
rJMFF015C08+ CCACAAGATCAACAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
rJMFF045H11+ CCACAAGATCAGCAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
                      ____________________________________________________________
consensus CCACAAGATCAACAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
 
. : . : . : . : . : . :
rJMSF017N13+ GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
rJMSF013I16+ GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
rJMSF026I03+ GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
rJMFF015C08+ GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
rJMFF045H11+ GAGGCTCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
                      ____________________________________________________________
consensus GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
 
. : . : . : . : . : . :
rJMSF017N13+ CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
rJMSF013I16+ CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
rJMSF026I03+ CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
rJMFF015C08+ CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
rJMFF045H11+ CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
                      ____________________________________________________________
consensus CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
 
. : . : . : . : . : . :
rJMSF017N13+ TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
rJMSF013I16+ TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
rJMSF026I03+ TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
rJMFF015C08+ TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
rJMFF045H11+ TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
                      ____________________________________________________________
consensus TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
 
. : . : . : . : . : . :
rJMSF017N13+ AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
rJMSF013I16+ AGTGTATCGCTACAATGGGAAGTATGATGAACNCCGAGCCGCTATTGAGAACTCAGATTG
rJMSF026I03+ AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
rJMFF015C08+ AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
rJMFF045H11+ AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
                      ____________________________________________________________
consensus AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
 
. : . : . : . : . : . :
rJMSF017N13+ CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
rJMSF013I16+ CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCNGTATGAAGACTC
rJMSF026I03+ CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
rJMFF015C08+ CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
rJMFF045H11+ CGTTGTAGAAGATGTTAAATCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
                      ____________________________________________________________
consensus CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
 
. : . : . : . : . : . :
rJMSF017N13+ TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
rJMSF013I16+ TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
rJMSF026I03+ TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
rJMFF015C08+ TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
rJMFF045H11+ TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
                      ____________________________________________________________
consensus TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
 
. : . : . : . : . : . :
rJMSF017N13+ TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
rJMSF013I16+ TTTTATTTTTATTTTTATATTTCCTTGTTCATCCTATATTATAGGCTTCAGTTCTTTTAG
rJMSF026I03+ TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
rJMFF015C08+ TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
rJMFF045H11+ TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
                      ____________________________________________________________
consensus TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
 
. : . : . : . : . : . :
rJMSF017N13+ TTTCTGCATTAATTATACATTTTGAAGTGAGACTGA
rJMSF013I16+ TTTNTGCNTTAATTATACATTTTGAAGTGNGACTGA
rJMSF026I03+ TTTCTGCATTAATTATACATTTTGAAGTGAGACTGA
rJMFF015C08+ TTTCTGCATTAATTATACATTTTGAAGTGAGACTGATGTA
rJMFF045H11+ TTTCTGCATTAATTATACATTTTGAAGTGAGACTGATGTATATAAATATCTTTTTATATT
                      ____________________________________________________________
consensus TTTCTGCATTAATTATACATTTTGAAGTGAGACTGATGTATATAAATATCTTTTTATATT