Contig 008346:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015C08Sequence653000776 (5)ref|XP_004249537.1|2e-82PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi595008346 (5)ref|XP_009782347.1|3e-74PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMFF045H11Sequence638000776 (5)ref|XP_004249537.1|4e-98PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi604008346 (5)ref|XP_009782347.1|2e-61PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMSF013I16Sequence491000776 (5)ref|XP_004249537.1|1e-46PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi730008346 (5)ref|XP_009782347.1|1e-102PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMSF017N13Sequence250000776 (5)733008346 (5)ref|XP_010111450.1|8e-80hypothetical protein L484_021273 [Morus notabilis] gb|EXC30973.1| hypothetical p
JMSF026I03Sequence651000776 (5)ref|XP_004249537.1|2e-71PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi744008346 (5)ref|XP_009782347.1|3e-111PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+                                       GTTGGTTTGGTGCTGGTCGATATGAAGTGGA
rJMSF013I16+                                       GTTGNTTTGGTGCTGGTCGATATGAAGTGGA
rJMSF026I03+                               ACCTTGCGGTTGGTTTGGTGCTGGTCGATATGAAGTGGA
                      ____________________________________________________________
consensus                                  ACCTTGCGGTTGGTTTGGTGCTGGTCGATATGAAGTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          TGGATATGTATACAATGCTGATGAAGAACCTAAAATTTTGATGAGTGGAAAGTGGAATGA
rJMSF013I16+          TGGATATGTATNCAATGCTGATGNAGAACCTAAAATTTTGATGAGTGGAAAGTGGAATGA
rJMSF026I03+          TGGATATGTATACAATGCTGATGAAGAACCTAAAATTTTGATGAGTGGAAAGTGGAATGA
                      ____________________________________________________________
consensus             TGGATATGTATACAATGCTGATGAAGAACCTAAAATTTTGATGAGTGGAAAGTGGAATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          ATTTATGAGTTTTCAACCTTGTGATTCTGAAGGAGAACCCCTTCCGGGAACTGAAATGAA
rJMSF013I16+          ATTTATGAGTTTTCAACCTTGTGATTCNGAAGGAGAACCCCTTCCGGGAACTGAAATGAA
rJMSF026I03+          ATTTATGAGTTTTCAACCTTGTGATTCTGAAGGAGAACCCCTTCCGGGAACTGAAATGAA
rJMFF015C08+                                                              GAAATGAA
rJMFF045H11+                                                                  TGAA
                      ____________________________________________________________
consensus             ATTTATGAGTTTTCAACCTTGTGATTCTGAAGGAGAACCCCTTCCGGGAACTGAAATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
rJMSF013I16+          AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
rJMSF026I03+          AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
rJMFF015C08+          AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
rJMFF045H11+          AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
                      ____________________________________________________________
consensus             AGAGGTTTGGAGAGCCGCCGATGCTCCACAAAACGATAAATTCCAATATACATATTTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          CCACAAGATCAACAGTTTTGACACTGC-CCCAAAAAGTTACTGGCATCTGACTCTCGCTT
rJMSF013I16+          CCACAAGATCAACAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
rJMSF026I03+          CCACAAGATCAACAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
rJMFF015C08+          CCACAAGATCAACAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
rJMFF045H11+          CCACAAGATCAGCAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
                      ____________________________________________________________
consensus             CCACAAGATCAACAGTTTTGACACTGCACCCAAAAAGTTACTGGCATCTGACTCTCGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
rJMSF013I16+          GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
rJMSF026I03+          GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
rJMFF015C08+          GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
rJMFF045H11+          GAGGCTCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
                      ____________________________________________________________
consensus             GAGGCCCGATCGATGTGCACTTGAGAAGGGTGACCTATCCAAAGCTGGCGCTGAAAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
rJMSF013I16+          CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
rJMSF026I03+          CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
rJMFF015C08+          CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
rJMFF045H11+          CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
                      ____________________________________________________________
consensus             CAGCTTGGAGGAGAGGCAGAGAGCCGAAAAGAGAATGAGAGAGGCGAAGGGAGACGAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
rJMSF013I16+          TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
rJMSF026I03+          TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
rJMFF015C08+          TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
rJMFF045H11+          TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
                      ____________________________________________________________
consensus             TAAACCAAAATGGTTTGATTTAACAACCGAAATTTCCCCCACTCCTTGGGGCGAGCTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
rJMSF013I16+          AGTGTATCGCTACAATGGGAAGTATGATGAACNCCGAGCCGCTATTGAGAACTCAGATTG
rJMSF026I03+          AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
rJMFF015C08+          AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
rJMFF045H11+          AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
                      ____________________________________________________________
consensus             AGTGTATCGCTACAATGGGAAGTATGATGAACACCGAGCCGCTATTGAGAACTCAGATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
rJMSF013I16+          CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCNGTATGAAGACTC
rJMSF026I03+          CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
rJMFF015C08+          CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
rJMFF045H11+          CGTTGTAGAAGATGTTAAATCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
                      ____________________________________________________________
consensus             CGTTGTAGAAGATGTTAAAGCCGAGTCGACAGAGTTCAACCCATGGCAGTATGAAGACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
rJMSF013I16+          TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
rJMSF026I03+          TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
rJMFF015C08+          TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
rJMFF045H11+          TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
                      ____________________________________________________________
consensus             TGTTGTTGCTGCATAATGCCCTTATCATCTTCTCATTGTGTCTCATAGATACTTGTTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
rJMSF013I16+          TTTTATTTTTATTTTTATATTTCCTTGTTCATCCTATATTATAGGCTTCAGTTCTTTTAG
rJMSF026I03+          TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
rJMFF015C08+          TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
rJMFF045H11+          TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
                      ____________________________________________________________
consensus             TTTTATTTTTATTTTTATATTTCCTTGTTCATCTTATATTATAGGCTTCAGTTCTTTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF017N13+          TTTCTGCATTAATTATACATTTTGAAGTGAGACTGA                        
rJMSF013I16+          TTTNTGCNTTAATTATACATTTTGAAGTGNGACTGA                        
rJMSF026I03+          TTTCTGCATTAATTATACATTTTGAAGTGAGACTGA                        
rJMFF015C08+          TTTCTGCATTAATTATACATTTTGAAGTGAGACTGATGTA                    
rJMFF045H11+          TTTCTGCATTAATTATACATTTTGAAGTGAGACTGATGTATATAAATATCTTTTTATATT
                      ____________________________________________________________
consensus             TTTCTGCATTAATTATACATTTTGAAGTGAGACTGATGTATATAAATATCTTTTTATATT