Contig 008335:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF013O02-                                                                    ACT
                      ____________________________________________________________
consensus                                                                      ACT
 
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JMFF013O02-           TTGTTTCCAAATTCCAAATTCTATCGGGAAAGGCGGTTTCAGACTTTCAGGATGGGTGGG
                      ____________________________________________________________
consensus             TTGTTTCCAAATTCCAAATTCTATCGGGAAAGGCGGTTTCAGACTTTCAGGATGGGTGGG
 
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JMFF013O02-           AAGAAGAAGAACAAGAGCAGCGGCGGAGGAGGAGAACAGGAGAACGGAGGCGGCGGCGGC
                      ____________________________________________________________
consensus             AAGAAGAAGAACAAGAGCAGCGGCGGAGGAGGAGAACAGGAGAACGGAGGCGGCGGCGGC
 
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JMFF013O02-           GACGGCAGCATCACCGTGGTTCTCAAGGCCGATTTGCATTGCGAAGGTTGTGTTTCCAAA
                      ____________________________________________________________
consensus             GACGGCAGCATCACCGTGGTTCTCAAGGCCGATTTGCATTGCGAAGGTTGTGTTTCCAAA
 
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JMFF013O02-           ATCGTCAAAACTATTCGGAGTTACGATGGTGTTCAGACCGTGGATATCGACGGCAACTCG
                      ____________________________________________________________
consensus             ATCGTCAAAACTATTCGGAGTTACGATGGTGTTCAGACCGTGGATATCGACGGCAACTCG
 
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JMFF013O02-           GATAAGGTGACGGTGATCGGGAAAATGGATCCGGAGAAGCTCCGGGAGAGAGTGGAGGCC
                      ____________________________________________________________
consensus             GATAAGGTGACGGTGATCGGGAAAATGGATCCGGAGAAGCTCCGGGAGAGAGTGGAGGCC
 
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JMFF013O02-           AAAACGCACAAAAAAATTGTGCTGGTCTCTCCACAGGCAAAAGGCGGAAACGGAGGTGAA
                      ____________________________________________________________
consensus             AAAACGCACAAAAAAATTGTGCTGGTCTCTCCACAGGCAAAAGGCGGAAACGGAGGTGAA
 
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JMFF013O02-           AAACAGAAGAAAAAACGGAAACGATGGAGAAAAGAAGGACAAAGAGAAAGAGCCGGCGCT
rJMFF013O02+                             AACGATGGAGAAAAGAAGGACAAAGAGAAAGAGCCGGCGCT
                      ____________________________________________________________
consensus             AAACAGAAGAAAAAACGGAAACGATGGAGAAAAGAAGGACAAAGAGAAAGAGCCGGCGCT
 
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JMFF013O02-           CACTACGGTGGTGCTGAAGATGAACCTACACTGTGAAGGATGTATCCAGAAGATTCAAAA
rJMFF013O02+          CACTNCGGTGGTGCTGAAGATGAACCTACACTGTGAAGGATGTATCCAGAAGATTCAAAA
                      ____________________________________________________________
consensus             CACTACGGTGGTGCTGAAGATGAACCTACACTGTGAAGGATGTATCCAGAAGATTCAAAA
 
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JMFF013O02-           GACAGTGAGCAGAACCAGAGGCTACTTGGAGATGAAGGTGGATCCAGAAAAGGATCTAGT
rJMFF013O02+          GACAGTGAGCAGANCCAGAGGCTACTTGGAGATGAAGGTGGATCCAGAAAAGGATCTAGT
rJMFF044M11+                            AGGCTACTTGGAGATGAAGGTGGATCCAGAAAAGGATCTAGT
                      ____________________________________________________________
consensus             GACAGTGAGCAGAACCAGAGGCTACTTGGAGATGAAGGTGGATCCAGAAAAGGATCTAGT
 
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JMFF013O02-           GACCGTGACTGGGAAAATGAACGTGAANGCGATGGTGGAGGATTTGAA            
rJMFF013O02+          GACCGTGACTGGGAAAATGAACGTGAAGGCGATGGTGGAGGATTTGAAGAAGCATCTGAA
rJMFF044M11+          GACCGTGACTGGGAAAATGAACGTGAAGGCGATGGTGGAGGATTTGAAGAAGCATCTGAA
                      ____________________________________________________________
consensus             GACCGTGACTGGGAAAATGAACGTGAAGGCGATGGTGGAGGATTTGAAGAAGCATCTGAA
 
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rJMFF013O02+          GAAGAATGTGGAGATAGTGCCTCCTAAGAAGGAGAAAGGCGGGAAAGAGAATGCTGGTGG
rJMFF044M11+          GAAGAATGTGGAGATAGTGCCTCCTAAGAAGGAGAAAGGCGGGAAAGAGAATGCTGGTGG
                      ____________________________________________________________
consensus             GAAGAATGTGGAGATAGTGCCTCCTAAGAAGGAGAAAGGCGGGAAAGAGAATGCTGGTGG
 
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rJMFF013O02+          CGAGAAGGACGGTGGAGGAGGAGGGGGGAAGGTGGTGGTGGTGGAAGGGAATAGACTGCA
rJMFF044M11+          CGAGAAGGACGGTGGAGGAGGAGGGGGGAAGGTGGTGGTGGTGGAAGGGAATAGACTGCA
                      ____________________________________________________________
consensus             CGAGAAGGACGGTGGAGGAGGAGGGGGGAAGGTGGTGGTGGTGGAAGGGAATAGACTGCA
 
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rJMFF013O02+          GGTGCAGATGGGGTATCCGTATAATCAGGATCCGTACCCGTATGCGTGTCAGACGGGTTA
rJMFF044M11+          GGTGCAGATGGGGTATCCGTATAATCAGGATCCGTACCCGTATGCGTGTCAGACGGGTTA
                      ____________________________________________________________
consensus             GGTGCAGATGGGGTATCCGTATAATCAGGATCCGTACCCGTATGCGTGTCAGACGGGTTA
 
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rJMFF013O02+          TCAGCCCTTCTACAATTACCCTCATGCCCCTCAAATGTTTAGCGATGAGAATCCGAATGC
rJMFF044M11+          TCAGCCCTTCTACAATTACCCTCATGCCCCTCAAATGTTTAGCGATGAGAATCCGAATGC
                      ____________________________________________________________
consensus             TCAGCCCTTCTACAATTACCCTCATGCCCCTCAAATGTTTAGCGATGAGAATCCGAATGC
 
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rJMFF013O02+          ATGCAGTGTCATGTGAACTGGGTCCAAATATGTAAATAAACACGTTTTTGGGTATAATCT
rJMFF044M11+          ATGCAGTGTCATGTGAACTGGGTCCAAATATGTAAATAAACACGTTTTTGGGTATAATCT
                      ____________________________________________________________
consensus             ATGCAGTGTCATGTGAACTGGGTCCAAATATGTAAATAAACACGTTTTTGGGTATAATCT
 
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rJMFF013O02+          GTTAGCCCGTATAAGTAGTGGTGCGGTTCGGGTTTAGATGGGTCAAAACTGAGAAGCCCA
rJMFF044M11+          GTTAGCCCGTATAAGTAGTGGTGCGGTTCGGGTTTAGATGGGTCAAAACTGAGAAGCCCA
                      ____________________________________________________________
consensus             GTTAGCCCGTATAAGTAGTGGTGCGGTTCGGGTTTAGATGGGTCAAAACTGAGAAGCCCA
 
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rJMFF013O02+          ACAACATGTAGTTGGGTAGTTACTGCTCATTGGATAGGTTTTCTATTGTTCTGTTACTAC
rJMFF044M11+          ACAACATGTAGTTGGGTAGTTACTGCTCATTGGATAGGTTTTCTATTGTTCTGTTACTAC
                      ____________________________________________________________
consensus             ACAACATGTAGTTGGGTAGTTACTGCTCATTGGATAGGTTTTCTATTGTTCTGTTACTAC
 
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rJMFF013O02+          TTACAACACGTTCATCAAGAAAAT                                    
rJMFF044M11+          TTACAACACGTTCATCAAGAAAATTTAGACATTGCATATTCAAATAATTTTTTTTAGCAG
                      ____________________________________________________________
consensus             TTACAACACGTTCATCAAGAAAATTTAGACATTGCATATTCAAATAATTTTTTTTAGCAG