Contig 008334:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF050A21+                       AAGCAGAAGAAGTTNNCTGTCATCTGTCTTCCATGGAAGGCGCCGGA
rJMFF044L11+                        AGCAGAAGAAGTTTACTGTCATCTGTCTTCCATGGAAGGCGCCGGA
                      ____________________________________________________________
consensus                          AAGCAGAAGAAGTTTACTGTCATCTGTCTTCCATGGAAGGCGCCGGA
 
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rJMFF050A21+          GCTCGAGTTTATGAGCTAATTGAGCTCAAATCAATAGGGAGATTGCAATGTAAATAACTC
rJMFF044L11+          GCTCGAGTTTATGAGCTAATTGAGCTCAAATCAATAGGGAGATTGCAATGTAAATAACTC
                      ____________________________________________________________
consensus             GCTCGAGTTTATGAGCTAATTGAGCTCAAATCAATAGGGAGATTGCAATGTAAATAACTC
 
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rJMFF050A21+          TGGGTATGTAATGATATCTCAATGCTGCATTCAATGGAACAATGGATACTGCTAAAACCA
rJMFF044L11+          TGGGTATGTAATGATATCTCAATGCTGCATTCAATGGAACAATGGATACTGCTAAAACCA
                      ____________________________________________________________
consensus             TGGGTATGTAATGATATCTCAATGCTGCATTCAATGGAACAATGGATACTGCTAAAACCA
 
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rJMFF050A21+          TGGCAAAGAAAGAAGCTTTAGCTTAGCTTTAGAAGTGAAGAATCAAGAATGCAGTTGAGA
rJMFF044L11+          TGGCAAAGAAAGAAGCTTTAGCTTAGCTTTAGAAGTGAAGAATCAAGAATGCAGTTGAGA
                      ____________________________________________________________
consensus             TGGCAAAGAAAGAAGCTTTAGCTTAGCTTTAGAAGTGAAGAATCAAGAATGCAGTTGAGA
 
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rJMFF050A21+          AGGAAGAACCCAGGGTTAACAATGGCTCCTGGAATCAAGAAGGTACACAGCTCATGTACC
rJMFF044L11+          AGGAAGAACCCAGGGTTAACAATGGCTCCTGGAATCAAGAAGGTACACAGCTCATGTACC
                      ____________________________________________________________
consensus             AGGAAGAACCCAGGGTTAACAATGGCTCCTGGAATCAAGAAGGTACACAGCTCATGTACC
 
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rJMFF050A21+          ACAGTGGCTTTGAAATCTAAGAGTTCCTGCTGTTTATTTTTATTTTTACATTATTATACC
rJMFF044L11+          ACAGTGGCTTTGAAATCTAAGAGTTCCTGCTGTTTATTTTTATTTTTACATTATTATACC
                      ____________________________________________________________
consensus             ACAGTGGCTTTGAAATCTAAGAGTTCCTGCTGTTTATTTTTATTTTTACATTATTATACC
 
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rJMFF050A21+          TAGGTTCTTTTCATTGGATTTAAGGGCATAGAAACCTTTAAATTGTATTCAGCTTATGGA
rJMFF044L11+          TAGGTTCTTTTCATTGGATTTAAGGGCATAGAAACCTTTAAATTGTATTCAGCTTATGGA
                      ____________________________________________________________
consensus             TAGGTTCTTTTCATTGGATTTAAGGGCATAGAAACCTTTAAATTGTATTCAGCTTATGGA
 
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rJMFF050A21+          GTTTACCTGAAATTGGATTTTGGGATTTGATGGTGGATGAATTATTATATTCATGTATAA
rJMFF044L11+          GTTTACCTGAAATTGGATTTTGGGATTTGATGGTGGATGAATTATTATATTCATGTATAA
                      ____________________________________________________________
consensus             GTTTACCTGAAATTGGATTTTGGGATTTGATGGTGGATGAATTATTATATTCATGTATAA
 
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rJMFF050A21+          ATGAGTAAATGACATCCCACATTAGAAGGTCATCCTGCTGCTGCTTATAATGGTGGACCT
rJMFF044L11+          ATGAGTAAATGACATCCCACATTAGAAGGTCATCCTGCTGCTGCTTATAATGGTGGACCT
                      ____________________________________________________________
consensus             ATGAGTAAATGACATCCCACATTAGAAGGTCATCCTGCTGCTGCTTATAATGGTGGACCT
 
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rJMFF050A21+          TGTGGCTTGAAACATTCTCTTTTATCATGTAATTACATTGTTGTCAGAGGACGATCTTGA
rJMFF044L11+          TGTGGCTTGAAACATTCTCTTTTATCATGTAATTACATTGTTGTCAGAGGACGATCTTGA
                      ____________________________________________________________
consensus             TGTGGCTTGAAACATTCTCTTTTATCATGTAATTACATTGTTGTCAGAGGACGATCTTGA
 
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rJMFF050A21+          CAATTGCAATTAATCCTTTCAATAA                                   
rJMFF044L11+          CAATTGCAATTAATCCTTTCAATAAAAAAAAAAGAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             CAATTGCAATTAATCCTTTCAATAAAAAAAAAAGAAAAAAAAAAAAAAACTCTCCAGGGT