| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF044G03 | Sequence | 624 | 008331 (7) | ref|XP_009625765.1| | 6e-57 | PREDICTED: protein PELOTA 1 [Nicotiana tomentosiformis] | 641 | 008331 (7) | ref|XP_007029458.1| | 1e-41 | Eukaryotic release factor 1 family protein isoform 4 [Theobroma cacao] gb|EOY09 |
| JMSF003I03 | Sequence | 244 | 004891 (6) | 740 | 008331 (7) | emb|CDO99955.1| | 8e-61 | unnamed protein product [Coffea canephora] | |||
| JMSF003L24 | Sequence | 296 | 004891 (6) | 735 | 008331 (7) | gb|KDO54898.1| | 8e-35 | hypothetical protein CISIN_1g0205022mg, partial [Citrus sinensis] | |||
| JMSF004L24 | Sequence | 372 | 004891 (6) | 338 | 008331 (7) | ||||||
| JMSF044N09 | Sequence | 811 | 004891 (6) | 674 | 008331 (7) | emb|CDO99955.1| | 2e-78 | unnamed protein product [Coffea canephora] | |||
| JMSF051H13 | Sequence | 710 | 004891 (6) | 754 | 008331 (7) | emb|CDO99955.1| | 4e-59 | unnamed protein product [Coffea canephora] | |||
This contig is upended
. : . : . : . : . : . :
JMFF044G03- GACTATTTGTCTATCTCTCATTCTCTCCCGTGTCTCAGCCTCCCAGCCTCAC
____________________________________________________________
consensus GACTATTTGTCTATCTCTCATTCTCTCCCGTGTCTCAGCCTCCCAGCCTCAC
. : . : . : . : . : . :
JMFF044G03- GAGTCACGCCGTCGTCCACTCACCGTCCGGCCATCCCAGACTCCCTCATCGTCAGTCCGT
____________________________________________________________
consensus GAGTCACGCCGTCGTCCACTCACCGTCCGGCCATCCCAGACTCCCTCATCGTCAGTCCGT
. : . : . : . : . : . :
JMFF044G03- CACCATCCCAGACTCCCAGTCTGTCTCTGCCGGCTGCGGCTCTGCCTCTCCGCCGTCTCT
____________________________________________________________
consensus CACCATCCCAGACTCCCAGTCTGTCTCTGCCGGCTGCGGCTCTGCCTCTCCGCCGTCTCT
. : . : . : . : . : . :
JMFF044G03- ACCTCCCTGGTCGTCCCCATCTCTGCCTCTCTTGTCGGCTGCGACTCATCCCAGTCTGCT
____________________________________________________________
consensus ACCTCCCTGGTCGTCCCCATCTCTGCCTCTCTTGTCGGCTGCGACTCATCCCAGTCTGCT
. : . : . : . : . : . :
JMFF044G03- GTCACCGGCTGCTGCTCTGCGACTCTGCCAGATATCCAGTAAAATCGTAAAACATGAAGA
____________________________________________________________
consensus GTCACCGGCTGCTGCTCTGCGACTCTGCCAGATATCCAGTAAAATCGTAAAACATGAAGA
. : . : . : . : . : . :
JMFF044G03- TTGTTCGCAGAGACCTCATCCCCAAAGGCCCCGGCAGCGTCAAGATGGTTGCTGAAGAAG
____________________________________________________________
consensus TTGTTCGCAGAGACCTCATCCCCAAAGGCCCCGGCAGCGTCAAGATGGTTGCTGAAGAAG
. : . : . : . : . : . :
JMFF044G03- CAGATGATTTGTGGATTGCCTATAATTTGATAGGCGAGGGTGACACTGTTTTAGCTTCTA
____________________________________________________________
consensus CAGATGATTTGTGGATTGCCTATAATTTGATAGGCGAGGGTGACACTGTTTTAGCTTCTA
. : . : . : . : . : . :
JMFF044G03- CTTTTAGGAAAGTTTTAAGGGAAGATGCCTCGGGAGGAAGAGAAGCAGAACGACTAANAT
____________________________________________________________
consensus CTTTTAGGAAAGTTTTAAGGGAAGATGCCTCGGGAGGAAGAGAAGCAGAACGACTAANAT
. : . : . : . : . : . :
JMFF044G03- TAAAATTACAGATAAAAGTTGAGGCTGTGGAGTATGATAAAGAAGATTCTACCTTGCGTA
____________________________________________________________
consensus TAAAATTACAGATAAAAGTTGAGGCTGTGGAGTATGATAAAGAAGATTCTACCTTGCGTA
. : . : . : . : . : . :
JMFF044G03- TACGTGGGAAGAACATCCTGGAGAATGAACATGTAAAGATTGGTGCATTTCACACACTAG
rJMSF044N09+ ATTGGTGCATTTCACACACTAG
____________________________________________________________
consensus TACGTGGGAAGAACATCCTGGAGAATGAACATGTAAAGATTGGTGCATTTCACACACTAG
. : . : . : . : . : . :
JMFF044G03- AAATTGAGCTTCACAGACCTTTCGTTTTGGGG
rJMSF044N09+ AAGTTGAGCTTCACAGACCTTTCGTTTTGGGGAAGGATGTCTGGGACTCACTTGCTTTGG
rJMSF003I03+ TTGG
____________________________________________________________
consensus AAGTTGAGCTTCACAGACCTTTCGTTTTGGGGAAGGATGTCTGGGACTCACTTGCTTTGG
. : . : . : . : . : . :
rJMSF044N09+ AGGCTCTTCGTCAAGCTGCTGATCCTGCTGCAAGTGCTGACCTGGCTGTGGTTTTGATGC
rJMSF003I03+ AGGCTCTTCGTCAAGCTGCTGATCCTGCTGCAAGTGCTGACCTGGCTGTGGTTTTGATGC
rJMSF051H13+ GTCAAGCTGCTGATCCTGCTGCAAGTGCTGACCTGGCTGTGGTTTTGATGC
____________________________________________________________
consensus AGGCTCTTCGTCAAGCTGCTGATCCTGCTGCAAGTGCTGACCTGGCTGTGGTTTTGATGC
. : . : . : . : . : . :
rJMSF044N09+ AAGAGGGCTCGGCACAGATTTTTCTAATTGGTAAAAGTGTAACAATTTCTCGTTCTCGGA
rJMSF003I03+ AAGAGGGCTCGGCACAGATTTTTCTAATTGGTAAAAGTGTAACAATTTCTCGTTCTCGGA
rJMSF051H13+ AAGAGGGCTCGGCACAGATTTTTCTAATTGGTAAAAGTGTAACAATTTCTCGTTCTCGGA
____________________________________________________________
consensus AAGAGGGCTCGGCACAGATTTTTCTAATTGGTAAAAGTGTAACAATTTCTCGTTCTCGGA
. : . : . : . : . : . :
rJMSF044N09+ TAGAGACTTCTATTCCTTGGAAGCATGGCCCTGCTATAGCTGGTTATGATAAAGCTCTGA
rJMSF003I03+ TAGAGACTTCTATTCCTTGGAAGCATGGCCCTGCTATAGCTGGTTATGATAAAGCTCTGA
rJMSF051H13+ TAGAGACTTCTATTCCTTGGAAGCATGGCCCTGCTATAGCTGGTTATGATAAAGCTCTGA
____________________________________________________________
consensus TAGAGACTTCTATTCCTTGGAAGCATGGCCCTGCTATAGCTGGTTATGATAAAGCTCTGA
. : . : . : . : . : . :
rJMSF044N09+ CTAAGTTCTTCAATAATGTTGTAGATGCTTTCCTTAAGCATATTGATTTCAACGTGATTC
rJMSF003I03+ CTAAGTTCTTCAATAATGTTGTAGATGCTTTCCTTAAGCATATTGATTTCAACGTGATTC
rJMSF003L24+ GCTTTCCTTAAGCATATTGATTTCAACGTGATTC
rJMSF051H13+ CTAAGTTCTTCAATAATGTTGTAGATGCTTTCCTTAAGCATATTGATTTCAACGTGATTC
____________________________________________________________
consensus CTAAGTTCTTCAATAATGTTGTAGATGCTTTCCTTAAGCATATTGATTTCAACGTGATTC
. : . : . : . : . : . :
rJMSF044N09+ GTTGTGCTGTGATTGCAAGTCCAGGATTCACAAAGGATCAATTTCATCGTCACTTGCTGT
rJMSF003I03+ GTTGTGCTGTGATTGCAAGTCCAGGATTCACAAAGGATCAATTTCATCGTCACTTGCTGT
rJMSF003L24+ GTTGTGCTGTGATTGCAAGTCCAGGATTCACAAAGGATCAATTTCATCGTCACTTGCTGT
rJMSF051H13+ GTTGTGCTGTGATTGCAAGTCCAGGATTCACAAAGGATCAATTTCATCGTCACTTGCTGT
____________________________________________________________
consensus GTTGTGCTGTGATTGCAAGTCCAGGATTCACAAAGGATCAATTTCATCGTCACTTGCTGT
. : . : . : . : . : . :
rJMSF044N09+ TAGAAGCAGAGAGGAAGCAACTGAGACCTATAATAGAGAACAAATCACGGATAATTCTTG
rJMSF003I03+ TAGAAGCAGAGAGGAAGCAACTGAGACCTATAATAGAGAACAAATCACGGATAATTCTTG
rJMSF003L24+ TAGAAGCAGAGAGGAAGCAACTGAGACCTATAATAGAGAACAAATCACGGATAATTCTTG
rJMSF051H13+ TAGAAGCAGAGAGGAAGCAACTGAGACCTATAATAGAGAACAAATCACGGATAATTCTTG
____________________________________________________________
consensus TAGAAGCAGAGAGGAAGCAACTGAGACCTATAATAGAGAACAAATCACGGATAATTCTTG
. : . : . : . : . : . :
rJMSF044N09+ CACATACTACCTTGGGATATAAAACTGACGATGATGAGTGGTATTGCTGCAATCCTTCGG
rJMSF003I03+ CACATACTACCTTGGGATATAAAACTGACGATGATGAGTGGTATTGCTGCAATCCTTCGG
rJMSF003L24+ CACATACTACCTTGGGATATAAAACTGACGATGATGAGTGGTATTGCTGCAATCCTTCGG
rJMSF051H13+ CACATACTACCTTGGGATATAAAACTGACGATGATGAGTGGTATTGCTGCAATCCTTCGG
rJMFF044G03+ AACTGACGATGATGAGTGGTATTGCTGCAATCCTTCGG
____________________________________________________________
consensus CACATACTACCTTGGGATATAAAACTGACGATGATGAGTGGTATTGCTGCAATCCTTCGG
. : . : . : . : . : . :
rJMSF044N09+ TTTCCATTGCCCGACCTTGATGACATAGAGATGTGATGGAATGGAGGAAGGAATGCTTAA
rJMSF003I03+ TTTCCATTGCCCGACCTTGATGACATAGAGATGTGATGGAATGGAGGAAGGAATGCTTAA
rJMSF004L24+ CATTGCCCGACCTTGATGACATAGAGATGTGATGGAATGGAGGAAGGAATGCTTAA
rJMSF003L24+ TTTCCATTGCCCGACCTTGATGACATAGAGATGTGATGGAATGGAGGAAGGAATGCTTAA
rJMSF051H13+ TTTCCATTGCCCGACCTTGATGACATAGAGATGTGATGGAATGGAGGAAGGAATGCTTAA
rJMFF044G03+ TTTCCATTGCCCGACCTAGATGACATAGAAATGTGATGGAATGGAGGAAGGAGTGCTTAA
____________________________________________________________
consensus TTTCCATTGCCCGACCTTGATGACATAGAGATGTGATGGAATGGAGGAAGGAATGCTTAA
. : . : . : . : . : . :
rJMSF044N09+ TCACATTATTCTGTCTTCATTACATTGATGTGAGATTCCTCAAAGAGAGCTTAGTAGGTG
rJMSF003I03+ TCACATTATTCTGTCTTCATTACATTGATGTGAGATTCCTCAAAGAGAGCTTAGTAGGTG
rJMSF004L24+ TCACATTATTCTGTCTTCATTACATTGATGTGAGATTCCTCAAAGAGAGCTTAGTAGGTG
rJMSF003L24+ TCACATTATTCTGTCTTCATTACATTGATGTGAGATTCCTCAAAGAGAGCTTAGTAGGTG
rJMSF051H13+ TCACATTATTCTGTCTTCATTACATTGATGTGAGATTCCTCAAAGAGAGCTTAGTAGGTG
rJMFF044G03+ TCACATTATTCTGTCTCCATTACATTGATGTGAGATTCCTCAAAGAGAGCTTAGTAGGTG
____________________________________________________________
consensus TCACATTATTCTGTCTTCATTACATTGATGTGAGATTCCTCAAAGAGAGCTTAGTAGGTG
. : . : . : . : . : . :
rJMSF044N09+ ATGGTTGAATACATATACTTCCCATTCGCCTTGTATTACAAAATGGATTACT
rJMSF003I03+ ATGGTTGAATACATATACTTCCCATTCGCCTTGTATTACAAAATGGATTACTTGTATTGT
rJMSF004L24+ ATGGTTGAATACATATACTTCCCATTCGCCTTGTATTACAAAATGGATTACTTGTATTGT
rJMSF003L24+ ATGGTTGAATACATATACTTCCCATTCGCCTTGTATTACAAAATGGATTACTTGTATTGT
rJMSF051H13+ ATGGTTGAATACATATACTTCCCATTCGCCTTGTATTACAAAATGGATTACTTGTATTGT
rJMFF044G03+ ATGGTTGAATACATATACTTCCCATTCGCCTTATATTACAAAATGGATTACTTGTATTGT
____________________________________________________________
consensus ATGGTTGAATACATATACTTCCCATTCGCCTTGTATTACAAAATGGATTACTTGTATTGT
. : . : . : . : . : . :
rJMSF003I03+ ACTCTATGTATATAGTCTTCACAAGAACAGAGCTATCTTC-----TTCATAAGCAAATGG
rJMSF004L24+ ACTCTATGTATATAGTCTTCACAAGAACAGAGCTATCTTC-----TTCATAAGCAAATGG
rJMSF003L24+ ACTCTATGTATATAGTCTTCACAAGAACAGAGCTATCTTC-----TTCATAAGCAAATGG
rJMSF051H13+ ACTCTATGTATATAGTCTTCACAAGAACAGAGCTATCTTC-----TTCATAAGCAAATGG
rJMFF044G03+ ACTCTATGTATATAGTCTTCACAAGAACAGAGCTATCTTCTTCAATTCATAAGCAAATGG
____________________________________________________________
consensus ACTCTATGTATATAGTCTTCACAAGAACAGAGCTATCTTC-----TTCATAAGCAAATGG
. : . : . : . : . : . :
rJMSF003I03+ GATTTGGGTATTTGATATACCGCGTCATTTGGCATC-----TCACTCAAATGGAATAATA
rJMSF004L24+ GATTTGGGTATTTGATATACCGCGTCATTTGGCATC-----TCACTCAAATGGAATAATA
rJMSF003L24+ GATTTGGGTATTTGATATACCGCGTCATTTGGCATC-----TCACTCAAATGGAATAATA
rJMSF051H13+ GATTTGGGTATTTGATATACCGCGTCATTTGGCATC-----TCACTCAAATGGAATAATA
rJMFF044G03+ GATTTGGGTATTTGATATACCGCGTCATTTGGCATCTCAGATCACTCAAATGGAATAATA
____________________________________________________________
consensus GATTTGGGTATTTGATATACCGCGTCATTTGGCATC-----TCACTCAAATGGAATAATA
. : . : . : . : . : . :
rJMSF003I03+ TTTCTGTCACAT
rJMSF004L24+ TTTCTGTCACATTTTNTAAAAGTTTAGTGTAGG
rJMSF003L24+ TTTCTGTCACATTTTTTAAAAGTTTAGTGTAGG
rJMSF051H13+ TTTCTGTCACATTTTTTAAAAGTTTAGTGTAGG
rJMFF044G03+ TTTCTGTCACATTTTTTAAAAGTTTAGTGTAGGTGAAGACACCATCACATTTTGTAGATG
____________________________________________________________
consensus TTTCTGTCACATTTTTTAAAAGTTTAGTGTAGGTGAAGACACCATCACATTTTGTAGATG
. : . : . : . : . : . :
rJMFF044G03+ TGCTTTTAGTTTGAATAAAAGTATTTTTTTAAGAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus TGCTTTTAGTTTGAATAAAAGTATTTTTTTAAGAAAAAAAAAAAAAAAACTCTCCAGGGT