Contig 008327:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043N19Sequence594008327 (5)ref|XP_006356195.1|2e-74PREDICTED: monothiol glutaredoxin-S15, mitochondrial-like [Solanum tuberosum]611008327 (5)ref|XP_004241708.1|3e-55PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Solanum lycopersicum]
JMSF011B14Sequence244008327 (5)ref|XP_006356195.1|2e-06PREDICTED: monothiol glutaredoxin-S15, mitochondrial-like [Solanum tuberosum]730008327 (5)ref|XP_004241708.1|2e-86PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Solanum lycopersicum]
JMSF030B20Sequence372006572 (3)660008327 (5)ref|XP_004241708.1|1e-85PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Solanum lycopersicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011B14-                                                              GGAAGAAGA
JMFF043N19-              GATTCGTCGTCTTTCAACAACAGACGAAACTAGAAAGCTGAACGGAACGGAAGAAGA
                      ____________________________________________________________
consensus                GATTCGTCGTCTTTCAACAACAGACGAAACTAGAAAGCTGAACGGAACGGAAGAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011B14-           ACGAAGCTCTTAGCCTCTTACTGTTTGTTTATACAACGCCCCTGCTCTACCATTGATCTT
JMFF043N19-           ACGAAGCTCTTAGCCTCTTACTGTTTGTTTATACAACGCCCCTGCTCTACCATTGATCTT
                      ____________________________________________________________
consensus             ACGAAGCTCTTAGCCTCTTACTGTTTGTTTATACAACGCCCCTGCTCTACCATTGATCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011B14-           CTCCGCTGTTTTACGAGTTTGAGGTGGATAGAAGCTCCAAGATTATGGCGAGGTCGTTAC
JMFF043N19-           CTCCGCTGTTTTACGAGTTTGAGGTGGATAGAAGCTCCAAGATTATGGCGAGGTCGTTAC
rJMSF011B14+                              GAGGTGGATAGAAGCTCCAAGATTATGGCGAGGTCGTTAC
                      ____________________________________________________________
consensus             CTCCGCTGTTTTACGAGTTTGAGGTGGATAGAAGCTCCAAGATTATGGCGAGGTCGTTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011B14-           CTAACATGCTGCTTAAAGGCCTTGCCGGGTACCGAACATCTGCCATTGGATCCAGATCCT
JMFF043N19-           CTAACATGCTGCTTAAAGGCCTTGCCGGGTACCGAACATCTGCCATTGGATCCAGATCCT
rJMSF030B20+          CTAACATGCTGCTTAAAGGCCTTGCCGGCTACCGAACATCTGCCCTTGGATCCAGATCCT
rJMSF011B14+          CTAACATGCTGCTTAAAGGCCTTGCCGGGTACCGAACATCTGCCATTGGATCCAGATCCT
                      ____________________________________________________________
consensus             CTAACATGCTGCTTAAAGGCCTTGCCGGGTACCGAACATCTGCCATTGGATCCAGATCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF011B14-           TGTATCAAGCTGGAAATCGGTACTTAAGCTCTGTGCCTAATGACCCGGACACAC      
JMFF043N19-           TGTATCAAGCTGGAAATCGGTACTTAAGCTCTGTGCCTAATGACCCGGACACACACGAAG
rJMSF030B20+          TGTACCAAGCTGGAAATCGGTACTTAAGCTCTGCGCCTAATGACCCAGACACACACGAAG
rJMSF011B14+          TGTATCAAGCTGGAAATCGGTACTTAAGCTCTGTGCCTAATGACCCGGACACACACGAAG
                      ____________________________________________________________
consensus             TGTATCAAGCTGGAAATCGGTACTTAAGCTCTGTGCCTAATGACCCGGACACACACGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043N19-           ATTTTCGACCTACTAGTAAAGTTGAGAGTTCCGGTATTTCATTGAAGGACATAGTTGAGC
rJMSF030B20+          ATTTTCGACCTACTAGTAAAGTTGAGAGTTCCGGTATTTCATTGAAGGACACCGTTGAGC
rJMSF011B14+          ATTTTCGACCTACTAGTAAAGTTGAGAGTTCCGGTATTTCATTGAAGGACATAGTTGAGC
rJMFF043N19+                                                               GTTGAGC
                      ____________________________________________________________
consensus             ATTTTCGACCTACTAGTAAAGTTGAGAGTTCCGGTATTTCATTGAAGGACATAGTTGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043N19-           AGGATGTCAAAGAAAACCCCGTGATGCTTTACATGAAAGGGGTGCCCAATCGTCCTCTAT
rJMSF030B20+          AGGATGTCAAAGACAACCCCGTGATGCTTTACATGAAAGGGGTGCCTGATCTTCCTCGAT
rJMSF011B14+          AGGATGTCAAAGAAAACCCCGTGATGCTTTACATGAAAGGGGTGCCCAATCGTCCTCTAT
rJMFF043N19+          AGGATGTCAAAGAAAACCCCGTGATGCTTTACATGAAAGGGGTGCCCAATCGTCCTCTAT
                      ____________________________________________________________
consensus             AGGATGTCAAAGAAAACCCCGTGATGCTTTACATGAAAGGGGTGCCCAATCGTCCTCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043N19-           GTGGATTCAGCTCATTAGCAGTGAGGGTTTTACAAGAATATAATGTTCCTATAAGTGCCA
rJMSF030B20+          GTGGATTCAGCTCATTAGCAGTGAGGGTTTTACAAGAATATAATGTTCCTATAAGTGCCA
rJMSF011B14+          GTGGATTCAGCTCATTAGCAGTGAGGGTTTTACAAGAATATAATGTTCCTATAAGTGCCA
rJMFF043N19+          GTGGATTCAGCTCATTAGCAGTGAGGGTTTTACAAGAATATAATGTTCCTATAAGTGCCA
                      ____________________________________________________________
consensus             GTGGATTCAGCTCATTAGCAGTGAGGGTTTTACAAGAATATAATGTTCCTATAAGTGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043N19-           GAAACATATTGGATAGTTATGAGCTAAAGGATGCTGTAAAATCCTTCAGCCACTGGCCCA
rJMSF030B20+          GAAACATATTGGATAGTTATGAGCTAAAGGATGCTGTAAAATCCTTCAGCCACTGGCCCA
rJMSF011B14+          GAAACATATTGGATAGTTATGAGCTAAAGGATGCTGTAAAATCCTTCAGCCACTGGCCCA
rJMFF043N19+          GAAACATATTGGATAGTTATGAGCTAAAGGATGCTGTAAAATCCTTCAGCCACTGGCCCA
                      ____________________________________________________________
consensus             GAAACATATTGGATAGTTATGAGCTAAAGGATGCTGTAAAATCCTTCAGCCACTGGCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043N19-           CATTCCCACAGATATTCATCAATGGAGAATTCGTTGGTGGATCAGACATCATCCTTA   
rJMSF030B20+          CATTCCCACAGATATTCATCAATGGAGAATTCATTGGTGGATCAGACATCATCCTTAGTA
rJMSF011B14+          CATTCCCACAGATATTCATCAATGGAGAATTCGTTGGTGGATCAGACATCATCCTTAGTA
rJMFF043N19+          CATTCCCACAGATATTCATCAATGGAGAATTCGTTGGTGGATCAGACATCATCCTTAGTA
                      ____________________________________________________________
consensus             CATTCCCACAGATATTCATCAATGGAGAATTCGTTGGTGGATCAGACATCATCCTTAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030B20+          TGCACCAGAGTGGGGAACTCAAGGAAAAGCTGAAAGACATTGTCAAGGAAGAAGGGAAAA
rJMSF011B14+          TGCACCAGAGTGGGGAACTCAAGGAAAAGCTGAAAGACATTGTCAAGGAAGAAGGGAAAA
rJMFF043N19+          TGCACCAGAGTGGGGAACTCAAGGAAAAGCTGAAAGACATTGTCAAGGAAGAAGGGAAAA
                      ____________________________________________________________
consensus             TGCACCAGAGTGGGGAACTCAAGGAAAAGCTGAAAGACATTGTCAAGGAAGAAGGGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030B20+          GGGAGTGAAACATAATTGCAGGAGGATACAACATAGACATTGTTTCAGTTGAATAATACT
rJMSF011B14+          GGGAGTGAAACCTAATTGCAGGAGGATGCAGCATAGACATTGTTTCAGTTGAATACTACT
rJMFF043N19+          GGGAGTGAAACCTAATTGCAGGAGGATGCAGCATAGACATTGTTTCAGTTGAATACTACT
                      ____________________________________________________________
consensus             GGGAGTGAAACCTAATTGCAGGAGGATGCAGCATAGACATTGTTTCAGTTGAATACTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030B20+          ACTACTATGAGAGATTTGAGTAGTAGTA-TTAGGTGGGAGGGAGGGATATTGCAGATTTC
rJMSF011B14+          CCTGCTATGAGAGATTTGAGTAGTATTAGTTGGGAGGGAGGGAGGGATATTGCAGATTTC
rJMFF043N19+          CCTGCTATGAGAGATTTGAGTAGTATTAGTTGGGAGGGAGGGAGGGATATTGCAGATTTC
                      ____________________________________________________________
consensus             CCTGCTATGAGAGATTTGAGTAGTATTAGTTGGGAGGGAGGGAGGGATATTGCAGATTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030B20+          CGAATGATAGACAAGTTTTGAATAATGTAAACA                           
rJMSF011B14+          CGGATGATAGACAAGTTTTGAATAATGTAAACACACATATCTCATCCTGTAGGTAGTACA
rJMFF043N19+          CGGATGATAGACAAGTTTTGAATAATGTAAACACACACATCTCATCCTGTAGGTAGTACA
                      ____________________________________________________________
consensus             CGGATGATAGACAAGTTTTGAATAATGTAAACACACATATCTCATCCTGTAGGTAGTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF011B14+          CAGCGCTCTCCACACGCTGGTCTTGCGGAC                              
rJMFF043N19+          CAGCGCTCTCCACACGCTGGTCTTGCGGACAGTTTGTAACACTCCCGATTTTAAGCATAA
                      ____________________________________________________________
consensus             CAGCGCTCTCCACACGCTGGTCTTGCGGACAGTTTGTAACACTCCCGATTTTAAGCATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF043N19+          TTTAAACGATTTGAAGCTTAGGAATAAAAGCAAAGACTAATCATTAACGTATTAAAAAAA
                      ____________________________________________________________
consensus             TTTAAACGATTTGAAGCTTAGGAATAAAAGCAAAGACTAATCATTAACGTATTAAAAAAA