| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009H08 | Sequence | 580 | 008980 (19) | emb|CDO99639.1| | 2e-78 | unnamed protein product [Coffea canephora] | 666 | 008325 (8) | ref|XP_008383826.1| | 1e-07 | PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Malus domestica] ref|XP |
| JMFF016L17 | Sequence | 462 | 008980 (19) | emb|CDO99639.1| | 2e-54 | unnamed protein product [Coffea canephora] | 707 | 008325 (8) | ref|XP_008383826.1| | 3e-10 | PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Malus domestica] ref|XP |
| JMFF040O11 | Sequence | 613 | 008980 (19) | emb|CDO99639.1| | 2e-86 | unnamed protein product [Coffea canephora] | 731 | 008325 (8) | ref|XP_008383826.1| | 1e-15 | PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Malus domestica] ref|XP |
| JMFF043I13 | Sequence | 639 | 008980 (19) | emb|CDO99639.1| | 2e-91 | unnamed protein product [Coffea canephora] | 615 | 008325 (8) | |||
| JMFF043K13 | Sequence | 639 | 008980 (19) | emb|CDO99639.1| | 3e-90 | unnamed protein product [Coffea canephora] | 632 | 008325 (8) | |||
| JMFF043M10 | Sequence | 620 | 008980 (19) | emb|CDO99639.1| | 3e-89 | unnamed protein product [Coffea canephora] | 651 | 008325 (8) | |||
| JMFF043P08 | Sequence | 635 | 008980 (19) | emb|CDO99639.1| | 3e-96 | unnamed protein product [Coffea canephora] | 611 | 008325 (8) | |||
| JMSF013K06 | Sequence | 497 | 008980 (19) | emb|CDO99639.1| | 8e-62 | unnamed protein product [Coffea canephora] | 730 | 008325 (8) | ref|XP_008383826.1| | 2e-22 | PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Malus domestica] ref|XP |
This contig is upended
. : . : . : . : . : . :
rJMSF013K06+ TCTTTGGATGTCGGCCTGCAATGTCACCATGAATGGCTGTCGTTATCTCGCCAA
rJMFF040O11+ CCATGAATGGCTGTCGTTATCTCGCCAA
____________________________________________________________
consensus TCTTTGGATGTCGGCCTGCAATGTCACCATGAATGGCTGTCGTTATCTCGCCAA
. : . : . : . : . : . :
rJMSF013K06+ ACAGAGGCCAATGTTGAACGTGGAGGTTATTAAAGAGGAGGGGAGTGATGACTGCGCTGC
rJMFF009H08+ TAAAGAGGAGGGGAGTGATGACTGCGCTGC
rJMFF040O11+ ACAGAGGCCAATGTTGAACGTGGAGGTTATTAAAGAGGAGGGGAGTGATGACTGCGCTGC
rJMFF016L17+ CCAATGTTGAACGTGGAGGTTANTAAAGAGGAGGGGAGTGATGNCTGCGCTGC
____________________________________________________________
consensus ACAGAGGCCAATGTTGAACGTGGAGGTTATTAAAGAGGAGGGGAGTGATGACTGCGCTGC
. : . : . : . : . : . :
rJMSF013K06+ TGATAAAGTATATGTCTATCGAAGTGTAGCAGGACGAAGGAGAGACGCCCCGTCTTTTGT
rJMFF009H08+ TGATAAAGTATATGTCTATCGAAGTGTAGCAGGACGAAGGAGAGACGCCCCGTCTTTTGT
rJMFF040O11+ TGATAAAGTATATGTCTATCGAAGTGTAGCAGGACGAAGGAGAGACGCCCCGTCTTTTGT
rJMFF016L17+ TGATAAAGTATATGTCTATCGAAGTGTAGCAGGACGAAGGAGAGACGCCCCGTCTTTTGT
____________________________________________________________
consensus TGATAAAGTATATGTCTATCGAAGTGTAGCAGGACGAAGGAGAGACGCCCCGTCTTTTGT
. : . : . : . : . : . :
rJMSF013K06+ TCTCACCTTTTAATGTCAATACCAACAGGAATTTCCCGGTATTTG-GTCGCCGCTCTCCT
rJMFF009H08+ TCTCACCTTTTAATGTCAATACCAACAGGAATTTCCCGGTATTTG-GTCGCTGCTCTCCT
rJMFF040O11+ TCTCACCTTTTAATGTCAATACCAACAGGAATTTCCCGGTATTTG-GTCGCTGCTCTCCT
rJMFF016L17+ TCTCACCTTTTAATGTCAATACCAACAGGAATTTCCCGGTATTTG-GTCGCTGCTCTCCT
rJMFF043I13+ TGTCAATACCAACAGGAATTTCCCGGTATTTG-GTCGCTGCTCTCCT
rJMFF043K13+ TAATGTCAATACCAACAGGAATTTCCCGGTATTTG-GTCGCTGCTCTCCT
rJMFF043P08+ TTTAATGTCAATACCAACAGGAATTTCCCGGTATTGGTNNCGCTGCTCTCCT
rJMFF043M10+ TTTAATGTCAATACCAACAGGAATTTCCCGGTATTTG-GTCGCTGCTCTCCT
____________________________________________________________
consensus TCTCACCTTTTAATGTCAATACCAACAGGAATTTCCCGGTATTTG-GTCGCTGCTCTCCT
. : . : . : . : . : . :
rJMSF013K06+ GCTCTATCTTGCTAATTTGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
rJMFF009H08+ GCTCTATCTTGCTAATTTGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
rJMFF040O11+ GCTCTATCTTGCTAATTTGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
rJMFF016L17+ GCTNTATCTTGCTAATTNGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
rJMFF043I13+ GCTCTATCTTGCTAATTTGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
rJMFF043K13+ GCTCTATCTTGCTAATTTGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
rJMFF043P08+ GCTCTATCTTGCTAATTTGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
rJMFF043M10+ GCTCTATCTTGCTAATTTGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
____________________________________________________________
consensus GCTCTATCTTGCTAATTTGCAGACGAGTGTAGAAATGGTGGTGGGAAACGAAGATTCTCG
. : . : . : . : . : . :
rJMSF013K06+ AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
rJMFF009H08+ AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
rJMFF040O11+ AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
rJMFF016L17+ AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
rJMFF043I13+ AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
rJMFF043K13+ AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
rJMFF043P08+ AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
rJMFF043M10+ AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
____________________________________________________________
consensus AGGGGTTGAGGTTTCTTTTCCAGCTGCAATTTGATGTGATGAATGAAACATCAAAGCTCC
. : . : . : . : . : . :
rJMSF013K06+ TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
rJMFF009H08+ TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
rJMFF040O11+ TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
rJMFF016L17+ TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
rJMFF043I13+ TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
rJMFF043K13+ TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
rJMFF043P08+ TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
rJMFF043M10+ TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
____________________________________________________________
consensus TGGAAAAGTTTAGGCTCAACTGCAGAATACCCATCCAGTCCCAGACATCTTGGAATCATA
. : . : . : . : . : . :
rJMSF013K06+ TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
rJMFF009H08+ TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
rJMFF040O11+ TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
rJMFF016L17+ TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
rJMFF043I13+ TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
rJMFF043K13+ TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
rJMFF043P08+ TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
rJMFF043M10+ TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
____________________________________________________________
consensus TCCCCAGAAGAAAATACTCACAGGAGATATAAGCTGCAGTGTGCAGAGAAGAGGAATTTG
. : . : . : . : . : . :
rJMSF013K06+ ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGAAGACATA
rJMFF009H08+ ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGAAGACATA
rJMFF040O11+ ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGAAGACATA
rJMFF016L17+ ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGNAGACATA
rJMFF043I13+ ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGAAGACATA
rJMFF043K13+ ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGAAGACATA
rJMFF043P08+ ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGAAGACATA
rJMFF043M10+ ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGAAGACATA
____________________________________________________________
consensus ATGGGTGAGTTTGGCATTTCCCAGGTGAGATAATGGACTGCAACCACTGTTGAAGACATA
. : . : . : . : . : . :
rJMSF013K06+ AAAAGATTTGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
rJMFF009H08+ AAAAGATTTGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
rJMFF040O11+ AAAAGATTTGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
rJMFF016L17+ AAAAGATTNGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
rJMFF043I13+ AAAAGATTTGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
rJMFF043K13+ AAAAGATTTGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
rJMFF043P08+ AAAAGATTTGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
rJMFF043M10+ AAAAGATTTGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
____________________________________________________________
consensus AAAAGATTTGAAGAGCTTAGATTACTCTTCATCAGAGGTTGTTTTGGACATCATTTGTAG
. : . : . : . : . : . :
rJMSF013K06+ AAGAAGTGTTGGAGGTTGTAGAGTTGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
rJMFF009H08+ AAGAAGTGTTGGAGGTTGTAGAGTTGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
rJMFF040O11+ AAGAAGTGTTGGAGGTTGTAGAGTTGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
rJMFF016L17+ AAGAAGTGTTGGAGGTTGTAGAGTNGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
rJMFF043I13+ AAGAAGTGTTGGAGGTTGTAGAGTTGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
rJMFF043K13+ AAGAAGTGTTGGAGGTTGTAGAGTTGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
rJMFF043P08+ AAGAAGTGTTGGAGGTTGTAGAGTTGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
rJMFF043M10+ AAGAAGTGTTGGAGGTTGTAGAGTTGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
____________________________________________________________
consensus AAGAAGTGTTGGAGGTTGTAGAGTTGAGGATTTCAGCGGAGGAACCAAAACAATAATGAA
. : . : . : . : . : . :
rJMSF013K06+ TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
rJMFF009H08+ TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
rJMFF040O11+ TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
rJMFF016L17+ TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
rJMFF043I13+ TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
rJMFF043K13+ TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
rJMFF043P08+ TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
rJMFF043M10+ TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
____________________________________________________________
consensus TTATCGAAGCTTGTTGTCTTTAATCTGTTTCTTATTCAAGAGTTATAGGATGTTCTTTAG
. : . : . : . : . : . :
rJMSF013K06+ TTTCCAATAACC
rJMFF009H08+ TTTCCAATAACCAGTGGAACTCATGTAACCTGTTTA
rJMFF040O11+ TTTCCAATAACCAGTGGAACTCATGTAACCTGTTTATTTCAATT
rJMFF016L17+ TTTCCAATAACCAGTGGAACTCATGTAACCTGTTTATTTCAATTTGATTTCTGCT
rJMFF043I13+ TTTCCAATAACCAGTGGAACTCATGTAACCTGTTTATTTCAATTTGATTTCTGCTATTTT
rJMFF043K13+ TTTCCAATAACCAGTGGAACTCATGTAACCTGTTTATTTCAATTTGATTTCTGCTATTTT
rJMFF043P08+ TTTCCAATAACCAGTGGAACTCATGTAACCTGTTTATTTCAATTTGATTTCTGCTATTTT
rJMFF043M10+ TTTCCAATAACCAGTGGAACTCATGTAACCTGTTTATTTCAATTTGATTTCTGCTATTTT
____________________________________________________________
consensus TTTCCAATAACCAGTGGAACTCATGTAACCTGTTTATTTCAATTTGATTTCTGCTATTTT
. : . : . : . : . : . :
rJMFF043I13+ ATAAA
rJMFF043K13+ ATAAA
rJMFF043P08+ ATAAA
rJMFF043M10+ ATAAATTTGGCCTTTCAATAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus ATAAATTTGGCCTTTCAATAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG