Contig 008323:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007D11Sequence154000174 (4)523008323 (9)ref|XP_009766183.1|3e-94PREDICTED: L-ascorbate oxidase homolog [Nicotiana sylvestris]
JMFF018D18Sequence566008323 (9)gb|EYU39285.1|7e-52hypothetical protein MIMGU_mgv1a026945mg [Erythranthe guttata]789022323gb|ABI52585.1|2e-75pollen-specific protein [Camellia sinensis]
JMFF027F06Sequence119000174 (4)472008323 (9)ref|XP_009766183.1|1e-84PREDICTED: L-ascorbate oxidase homolog [Nicotiana sylvestris]
JMFF030L22Sequence119000174 (4)445008323 (9)ref|XP_009766183.1|6e-80PREDICTED: L-ascorbate oxidase homolog [Nicotiana sylvestris]
JMFF033M22Sequence303008323 (9)gb|AAD02557.1|5e-56PGPS/NH15 [Petunia x hybrida]
JMFF038K18Sequence117000174 (4)361008323 (9)ref|XP_009766183.1|2e-65PREDICTED: L-ascorbate oxidase homolog [Nicotiana sylvestris]
JMFF043J19Sequence598019562ref|XP_006341879.1|2e-70PREDICTED: L-ascorbate oxidase homolog [Solanum tuberosum]539008323 (9)gb|AAD02557.1|2e-62PGPS/NH15 [Petunia x hybrida]
JMFF044F20Sequence619008865 (2)ref|XP_006341879.1|9e-76PREDICTED: L-ascorbate oxidase homolog [Solanum tuberosum]577008323 (9)gb|AAD02557.1|3e-74PGPS/NH15 [Petunia x hybrida]
JMFS141H03Sequence602008323 (9)emb|CDP18567.1|2e-79unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF018D18-                                                                    GGC
                      ____________________________________________________________
consensus                                                                      GGC
 
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JMFF018D18-           AAGCTCTACTATGAGCAGATAGAAAAATAAAAAATACCCCCTCTATCTCTTCAAAAAAAT
                      ____________________________________________________________
consensus             AAGCTCTACTATGAGCAGATAGAAAAATAAAAAATACCCCCTCTATCTCTTCAAAAAAAT
 
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JMFF018D18-           AAAAAAAAATAAAAAAATAAAAAAAAATTAACTCCGGGGTAGCCATGGATGGAGCTAGCA
                      ____________________________________________________________
consensus             AAAAAAAAATAAAAAAATAAAAAAAAATTAACTCCGGGGTAGCCATGGATGGAGCTAGCA
 
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JMFF018D18-           CAATCTTGGTGGTGTTTCTATTCTGTCTCTCCGGCGTGGGAGCGGAAGACCCCTATTTAT
                      ____________________________________________________________
consensus             CAATCTTGGTGGTGTTTCTATTCTGTCTCTCCGGCGTGGGAGCGGAAGACCCCTATTTAT
 
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JMFS141H03-              ACACTTGGAAGGTGACCTATGGCACCATTTCCCCCATGGGTGTCCCTCAACAGGGCA
JMFF018D18-           ATCACACTTGGAAGGTGTCCTATGGCACCATTTCCCCCATGGGTGTCCCTCAACAGGGCA
                      ____________________________________________________________
consensus             ATCACACTTGGAAGGTGTCCTATGGCACCATTTCCCCCATGGGTGTCCCTCAACAGGGCA
 
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JMFS141H03-           TCCTCATCAACGGCAAATTCCCAGGTCCTACGATCAATGGCACGTCCAACAACAACGTTG
JMFF018D18-           TCCTCATCAACGGCAAATTCCCAGGTCCTACGATCAATGGCACGTCCAACAACAACGTTG
                      ____________________________________________________________
consensus             TCCTCATCAACGGCAAATTCCCAGGTCCTACGATCAATGGCACGTCCAACAACAACGTTG
 
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JMFS141H03-           TTGTTAATGTTTTCAACGAGATAGACGAGCCGTTGCTCCTTACTTGGGGTGGCATCCAGC
JMFF018D18-           TTGTTAATGTTTTCAACGAGATAGACGAGCCGTTGCTCCTTACTTGGGGTGGCATCCAGC
                      ____________________________________________________________
consensus             TTGTTAATGTTTTCAACGAGATAGACGAGCCGTTGCTCCTTACTTGGGGTGGCATCCAGC
 
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JMFS141H03-           AACGCAAGAATTCTTGGATTGATGGCACTCTGGGGACCATGTGCCCTATCATGCCTGGCA
JMFF018D18-           AACGCAAGAATTCTTGGATTGATGGCACTCTGGGGACCATGTGCCCTATCATGCCTGGCA
                      ____________________________________________________________
consensus             AACGCAAGAATTCTTGGATTGATGGCACTCTGGGGACCATGTGCCCTATCATGCCTGGCA
 
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JMFS141H03-           CCAATTTTACTTATAAGTTCCAGGTGAAAGACCAGATCGGAAGTTACTTTTATTTCCCAA
JMFF018D18-           CCAATTTTACTTATAAGTTCCAGGTGAAAGACCAGATCGGAAGTTACTTTTATTTCCCAA
rJMFF038K18+                                                              GCCCCCAA
rJMFF007D11+                                                                 CCCAA
rJMFF030L22+                                                                 CCCAA
rJMFF027F06+                                                                 CCCAA
                      ____________________________________________________________
consensus             CCAATTTTACTTATAAGTTCCAGGTGAAAGACCAGATCGGAAGTTACTTTTATTTCCCAA
 
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JMFS141H03-           C                                                           
JMFF018D18-           CGTCGTCAACGCCACGTTTCGCAACTTCGTCGAGATCATATTCGAAAACCACGAAAAAAC
rJMFF038K18+          TGTCGTCAACGCCACATTCCGCAACTTCGTCGAGATCATATTCGAAAACCNCGNAAAGAC
rJMFF033M22+                                                              GAAAAGNC
rJMFF007D11+          TGTCGTCAACGCCACATTCCGCAACTTCGTCGAGATCATATTCGAAAACCACGAAAAGAC
rJMFF030L22+          TGTCGTCAACGCCACATTCCGCAACTTCGTCGAGATCATATTCGAAAACCACGAAAAGAC
rJMFF027F06+          TGTCGTCAACGCCACATTCCGCAACTTCGTCGAGATCATATTCGAAAACCACGAAAAGAC
rJMFF044F20+                         ATTCCGCAACTTCGTCGAGATCATATTCGAAAACCACGAAAAGAC
                      ____________________________________________________________
consensus             TGTCGTCAACGCCACATTCCGCAACTTCGTCGAGATCATATTCGAAAACCACGAAAAGAC
 
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JMFF018D18-           CATCCAAACCTACCACCTCGACG                                     
rJMFF038K18+          CATCCAANCCTACCACCTCGACGGCCACTCATTCTTTGCGGTGGGAATCGAGCCAGGAAA
rJMFF033M22+          CATCCAAACCTNCCACCTCGACGGCCACTCATTCTTTGCGGTGGGAATCGAGCCAGGAAA
rJMFF007D11+          CATCCAAACCTACCACCTCGACGGCCACTCATTCTTTGCGGTGGGAATCGAGCCAGGAAA
rJMFF030L22+          CATCCAAACCTACCACCTCGACGGCCACTCATTCTTTGCGGTGGGAATCGAGCCAGGAAA
rJMFF027F06+          CATCCAAACCTACCACCTCGACGGCCACTCATTCTTTGCGGTGGGAATCGAGCCAGGAAA
rJMFF044F20+          CATCCAAACCTACCACCTCGACGGCCACTCATTCTTTGCGGTGGGAATCGAGCCAGGAAA
rJMFF043J19+           ATCCAAACCTACCACCTCGACGGCCACTCATTCTTTGCGGTGGGAATCGAGCCAGGAAA
                      ____________________________________________________________
consensus             CATCCAAACCTACCACCTCGACGGCCACTCATTCTTTGCGGTGGGAATCGAGCCAGGAAA
 
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rJMFF038K18+          ATGGAGCCCAGAGAAGAGAAAGAACTACAACTTGGTGGACGCTATAAGCAGGCACACCAT
rJMFF033M22+          ATGGAGCCCAGAGAAGAGAAAGAACTACAACTTGGTGGACGCTATAAGCAGGCACNCCAT
rJMFF007D11+          ATGGAGCCCAGAGAAGAGAAAGAACTACAACTTGGTGGACGCTATAAGCAGGCACACCAT
rJMFF030L22+          ATGGAGCCCAGAGAAGAGAAAGAACTACAACTTGGTGGACGCTATAAGCAGGCACACCAT
rJMFF027F06+          ATGGAGCCCAGAGAAGAGAAAGAACTACAACTTGGTGGACGCTATAAGCAGGCACACCAT
rJMFF044F20+          ATGGAGCCCAGAGAAGAGAAAGAACTACAACTTGGTGGACGCTATAAGCAGGCACACCAT
rJMFF043J19+          ATGGAGCCCAGAGAAGAGAAAGAACTACAACTTGGTGGACGCTATAAGCAGGCACACCAT
                      ____________________________________________________________
consensus             ATGGAGCCCAGAGAAGAGAAAGAACTACAACTTGGTGGACGCTATAAGCAGGCACACCAT
 
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rJMFF038K18+          TCAAGTTTACCCCAACTCCTGGGCGGCTATCATTACCACTCTGGATAATGCCGGAATGTG
rJMFF033M22+          TCAAGTTTACCCCAACTCCTGGGCGGCTATCATGACCACTCTGGATAATGCCGGAATGTG
rJMFF007D11+          TCAAGTTTACCCCAACTCCTGGGCGGCTATCATGACCACTCTGGATAATGCCGGAATGTG
rJMFF030L22+          TCAAGTTTACCCCAACTCCTGGGCGGCTATCATGACCACTCTGGATAATGCCGGAATGTG
rJMFF027F06+          TCAAGTTTACCCCAACTCCTGGGCGGCTATCATTACCACTCTGGATAATGCCGGAATGTG
rJMFF044F20+          TCAAGTTTACCCCAACTCCTGGGCGGCTATCATTACCACTCTGGATAATGCCGGAATGTG
rJMFF043J19+          TCAAGTTTACCCCAACTCCTGGGCGGCTATCATGACCACTCTGGATAATGCCGGAATGTG
                      ____________________________________________________________
consensus             TCAAGTTTACCCCAACTCCTGGGCGGCTATCATGACCACTCTGGATAATGCCGGAATGTG
 
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rJMFF038K18+          GAACCTAAGATCGGAAATGTGGGCAAGAACATACTTGGGACAACAAATGTACTTCAGTGT
rJMFF033M22+          GAACCTAAGATCGGAAATGTGGGCAAGAACATACTTGGGACAACAAATGTACTTCAGTGT
rJMFF007D11+          GAACCTAAGATCGGAAATGTGGGCAAGAACATACTTGGGACAACAAATGTACTTCAGTGT
rJMFF030L22+          GAACCTAAGATCGGAAATGTGGGCAAGAACATACTTGGGACAACAAATGTACTTCAGTGT
rJMFF027F06+          GAACCTAAGATCGGAAATGTGGGCAAGAACATACTTGGGACAACAAATGTACTTCAGTGT
rJMFF044F20+          GAACCTAAGATCGGAAATGTGGGCAAGAACATACTTGGGACAACAAATGTACTTCAGTGT
rJMFF043J19+          GAACCTAAGATCGGAAATGTGGGCAAGAACATACTTGGGACAACAAATGTACTTCAGTGT
                      ____________________________________________________________
consensus             GAACCTAAGATCGGAAATGTGGGCAAGAACATACTTGGGACAACAAATGTACTTCAGTGT
 
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rJMFF038K18+          TCTTTCTCCGGAACGTTCGCTGAGGGATGAACACAATA                      
rJMFF033M22+          TCTTTCTCCGGAACGTTCGCTGAG                                    
rJMFF007D11+          TCTTTCTCCGGAACGTTCGCTGAGGGATGAACACAATAT                     
rJMFF030L22+          TCTTTCTCCGGAACGTTCGCTGAGGGATGAACACAATAT                     
rJMFF027F06+          TCTTTCTCCGGAACGTTCGCTGAGGGATGAACACAATAT                     
rJMFF044F20+          TCTTTCTCCGGAACGTTCGCTGAGGGATGAACACAATATTCCAGATAACCAGCTTCTCTG
rJMFF043J19+          TCTTTTTCCGGAACGTTCGCTGAGGGATGAACACAATATTCCAGATAACCAGCTTTTCTG
                      ____________________________________________________________
consensus             TCTTTCTCCGGAACGTTCGCTGAGGGATGAACACAATATTCCAGATAACCAGCTTTTCTG
 
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rJMFF044F20+          TGGCTTGGTCAAGGGCATGTCTGTGCCTCATCCGTACACCATTTAAAGGGCTGGGTTAAT
rJMFF043J19+          TGGCTTGGTCAAGGGCATGTCTGTGCCTCATCCGTACACCATTTAAAGGGCTGGGTTAAT
                      ____________________________________________________________
consensus             TGGCTTGGTCAAGGGCATGTCTGTGCCTCATCCGTACACCATTTAAAGGGCTGGGTTAAT
 
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rJMFF044F20+          TGGTTAAAATGCTTTGAAGAATATATATATAGTGTTGTAGAGATGGAGGGGTGGGTGGAA
rJMFF043J19+          TGGTTAAAATGCTTTGAAGAATATATATATAGTGTTGTAGAGATGGAGGGGTGGGTGGAA
                      ____________________________________________________________
consensus             TGGTTAAAATGCTTTGAAGAATATATATATAGTGTTGTAGAGATGGAGGGGTGGGTGGAA
 
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rJMFF044F20+          TTCTAGAGCATGACTCTAGTCTTTTCAATTTGGCGTTAATATGAATGAATGAAATAAATG
rJMFF043J19+          TTTTAGAGCATGACTCTAGTCTTTTCAATTTGGCGTTAATATGAATGAATGAAATAAATG
                      ____________________________________________________________
consensus             TTTTAGAGCATGACTCTAGTCTTTTCAATTTGGCGTTAATATGAATGAATGAAATAAATG
 
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rJMFF044F20+          GAAAAGAAGAAGGTTTGGTTTCCTTAAAAAAAAAAAAAAAA                   
rJMFF043J19+          GAAAAGAAGAAGGTTTGGTTTCCTTAATAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAA
                      ____________________________________________________________
consensus             GAAAAGAAGAAGGTTTGGTTTCCTTAATAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAA