| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003C10 | Sequence | 507 | 005201 (3) | ref|XP_004240685.1| | 6e-29 | PREDICTED: aspartic proteinase Asp1 [Solanum lycopersicum] | 681 | 008321 (3) | ref|XP_009631909.1| | 1e-86 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
| JMFF043E19 | Sequence | 641 | 005201 (3) | gb|EPS67652.1| | 9e-56 | hypothetical protein M569_07122 [Genlisea aurea] | 633 | 008321 (3) | ref|XP_009631909.1| | 8e-76 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
| JMSF035M16 | Sequence | 645 | 005201 (3) | gb|EPS67652.1| | 9e-56 | hypothetical protein M569_07122 [Genlisea aurea] | 610 | 008321 (3) | ref|XP_009631909.1| | 4e-72 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF003C10+ CTTAGGCGACGAGGTTTATG
____________________________________________________________
consensus CTTAGGCGACGAGGTTTATG
. : . : . : . : . : . :
rJMFF003C10+ ATGCCTCGCGTGTCACCTGGACACCCCATGTCCACGAGACTACACGAAGCACTACTCTCC
____________________________________________________________
consensus ATGCCTCGCGTGTCACCTGGACACCCCATGTCCACGAGACTACACGAAGCACTACTCTCC
. : . : . : . : . : . :
rJMFF003C10+ AGGGCCTGCAGAGCTAACTTTTGGTGGGAAAAGTACTGGGGTTAAGAATATGATTGTAGT
rJMSF035M16+ GCAGAGNTAACTTTTGGTGGGAAAAGTACTGGGGTTAAGAATATGANTGTAGT
rJMFF043E19+ GGAAAAGTACTGGGGTTAAGAATATGATNGTAGT
____________________________________________________________
consensus AGGGCCTGCAGAGCTAACTTTTGGTGGGAAAAGTACTGGGGTTAAGAATATGATTGTAGT
. : . : . : . : . : . :
rJMFF003C10+ GTTTGATAGTGGAAGCTCTTACAGCTATATGAATTCCCAACCATATGAAGCTTTTCTGTA
rJMSF035M16+ GTTTGATAGTGGAAGCTCTTACAGCTATATGAATTCCCAACCNTATGAAGCTTTTCTGTA
rJMFF043E19+ GTTTGATAGTGGAAGCTCTTACAGCTATATGAATTCCCAACCATATGAAGCTNTTCTGTA
____________________________________________________________
consensus GTTTGATAGTGGAAGCTCTTACAGCTATATGAATTCCCAACCATATGAAGCTTTTCTGTA
. : . : . : . : . : . :
rJMFF003C10+ TTCAGTGGTGAAAGAACTGAGAGGAAAGCCATTGAGAGAAGCTGGGGATGACCCTACCCT
rJMSF035M16+ TTCAGTGGTGAAAGAACTGAGAGGAAAGCCNTTGAGAGAAGCTGGGGANGACCCTACCCT
rJMFF043E19+ TTCAGTGGTGAAAGAACTGAGAGGAAAGCCATTGAGAGAAGCTGGGGATGACCCTACCCT
____________________________________________________________
consensus TTCAGTGGTGAAAGAACTGAGAGGAAAGCCATTGAGAGAAGCTGGGGATGACCCTACCCT
. : . : . : . : . : . :
rJMFF003C10+ ACCTTTCTGCTGGAAGGGCAGGAGGCCTTTCAGAAGCATCAGTGATGTGAAGAAATACTT
rJMSF035M16+ ACCTTTCTGCTGGAAGGGCAGGAGGCCTTTCAGAAGCATCAGNGATGTGAAGAAATACTT
rJMFF043E19+ ACCTTTCTGCTGGAAGGGCAGGAGGCCTTTCAGAAGCATCAGTGATGTGAAGAAATACTT
____________________________________________________________
consensus ACCTTTCTGCTGGAAGGGCAGGAGGCCTTTCAGAAGCATCAGTGATGTGAAGAAATACTT
. : . : . : . : . : . :
rJMFF003C10+ CAAGTCCTTTGCTCTCAGCTTCGCCAATGGATGGAGATCCAGAACTCTCTTCGAGATTTC
rJMSF035M16+ CAAGTCCTTTGCTNTCAGNTTCGCCAATGGATGGAGATCCAGAACTCTCTTCGAGATTTC
rJMFF043E19+ CAAGTCCTTTGCTCTCAGCTTCGCCAATGGATGGAGATCCAGAACTCTCTTCGAGATTTC
____________________________________________________________
consensus CAAGTCCTTTGCTCTCAGCTTCGCCAATGGATGGAGATCCAGAACTCTCTTCGAGATTTC
. : . : . : . : . : . :
rJMFF003C10+ CCCAGAATCATATCTCATCATCTCTTCTAAGGGCAGTGTCTGTCTGGGAGTTCTGAACGG
rJMSF035M16+ CCCAGAATCATATCTCATCATCTNTTNTAAGGGCAGTGTCTGTCTGGGAGTTCTGAACGG
rJMFF043E19+ CCCAGAATCATATCTCATCATCTCTTCTAAGGGCAGTGTCTGTCTGGGAGTTCTGAACGG
____________________________________________________________
consensus CCCAGAATCATATCTCATCATCTCTTCTAAGGGCAGTGTCTGTCTGGGAGTTCTGAACGG
. : . : . : . : . : . :
rJMFF003C10+ AACAGAAGCAGGACTGCATAACTACAACGTTATTGGAGATGTGTCGATGCAGGATAGAAT
rJMSF035M16+ AACAGAAGCAGGACTGCATAANTNCAACGTTATTGGAGATGTGTCGATGCAGGATAGAAT
rJMFF043E19+ AACAGAAGCAGGACTGCATAACTACAACGTTATTGGAGATGTGTCGATGCAGGATAGAAT
____________________________________________________________
consensus AACAGAAGCAGGACTGCATAACTACAACGTTATTGGAGATGTGTCGATGCAGGATAGAAT
. : . : . : . : . : . :
rJMFF003C10+ GGTGATTTACGACAATGAGAAGAACGCTATAGGTTGGACTCGCGCCAACTGCGATCGCCC
rJMSF035M16+ GGTGATTTACGACAATGAGAAGAACGCTATAGGTTGGACTCGCGCCAACTGCGATCGCCC
rJMFF043E19+ GGTGATTTACGACAATGAGAAGAACGCTATAGGTTGGACTCGCGCCAACTGCGATCGCCC
____________________________________________________________
consensus GGTGATTTACGACAATGAGAAGAACGCTATAGGTTGGACTCGCGCCAACTGCGATCGCCC
. : . : . : . : . : . :
rJMFF003C10+ TCCGGCACCCAACGTTGTTTTCATTTGAACAAATTTAGGCTTCCATTATTCATTCTCTCA
rJMSF035M16+ TCCGGCACCCAACGTTGTTTTCATTNGAACAAATTTAGGCTTCCATTATTCATTCTCTCA
rJMFF043E19+ TCCGGCACCCAACGTTGTTTTCATTTGAACAAATTTAGGCTTCCATTATTCATTCTCTCA
____________________________________________________________
consensus TCCGGCACCCAACGTTGTTTTCATTTGAACAAATTTAGGCTTCCATTATTCATTCTCTCA
. : . : . : . : . : . :
rJMFF003C10+ TCTGTAGGCTATAA-TTATATATAGCATTTATTATATCCTACAAACTGCCCTAGCTGCAT
rJMSF035M16+ TCTGTAGGCTATAACTTATNTATAGCATTTATTATATCCTACAAACTGCCCTAGCTGCAT
rJMFF043E19+ TCTGTAGGCTATAA-TTATATATAGCATTTATTATATCCTACAAACTGCCCTAGCTGCAT
____________________________________________________________
consensus TCTGTAGGCTATAA-TTATATATAGCATTTATTATATCCTACAAACTGCCCTAGCTGCAT
. : . : . : . : . : . :
rJMFF003C10+ TA
rJMSF035M16+ TATATTCAAATGTAGTA
rJMFF043E19+ TATATTCAAATGTAGTATGTACACTACTTCAGTAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus TATATTCAAATGTAGTATGTACACTACTTCAGTAAAAAAAAAAAAAAAACTCTCCAGGGT