clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF043C24 | Sequence | 618 | 003264 (3) | gb|KDO54132.1| | 7e-90 | hypothetical protein CISIN_1g012534mg [Citrus sinensis] | 650 | 008319 (3) | ref|XP_009794830.1| | 4e-69 | PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Nic |
JMFF046F12 | Sequence | 499 | 003264 (3) | gb|KDO54132.1| | 1e-76 | hypothetical protein CISIN_1g012534mg [Citrus sinensis] | 386 | 008319 (3) | ref|XP_008242592.1| | 1e-28 | PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isof |
JMSF043O11 | Sequence | 711 | 003264 (3) | gb|KDO54132.1| | 8e-40 | hypothetical protein CISIN_1g012534mg [Citrus sinensis] | 535 | 008319 (3) | ref|XP_009794830.1| | 2e-68 | PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Nic |
This contig is upended
. : . : . : . : . : . :
rJMSF043O11+ AACATTTGGTGGCAACAAGACTATCAACGAGATAATGAAGGAG
rJMFF043C24+ TAATTTCAACATTTGGTGGCAACAAGACTATCAACGAGATAATGAAGGAG
____________________________________________________________
consensus TAATTTCAACATTTGGTGGCAACAAGACTATCAACGAGATAATGAAGGAG
. : . : . : . : . : . :
rJMSF043O11+ CTAGAAAATCATCAGGAGAGTGCTGATACATTAGTGGCTGAGTGGGCCAAGGATGCTTTG
rJMFF043C24+ CTAGAAAATCATCAGGAGAGTGCTGATACATTAGTGGCTGAGTGGGCCAAGGATGCTTTG
____________________________________________________________
consensus CTAGAAAATCATCAGGAGAGTGCTGATACATTAGTGGCTGAGTGGGCCAAGGATGCTTTG
. : . : . : . : . : . :
rJMSF043O11+ CAAGGGCTTAGAAAGGGTGCCCCCTTTTCTCTTCATCTCACTCAAAAGTATTTCTCCAAA
rJMFF043C24+ CAAGGGCTTAGAAAGGGTGCCCCCTTTTCTCTTCATCTCACTCAAAAGTATTTCTCCAAA
____________________________________________________________
consensus CAAGGGCTTAGAAAGGGTGCCCCCTTTTCTCTTCATCTCACTCAAAAGTATTTCTCCAAA
. : . : . : . : . : . :
rJMSF043O11+ GTTGCAGCTGCTCGCGGATGCAATAACAATATCTTATCAAAGCTAACTGGGGTGATGAAA
rJMFF046F12+ ATGAAA
rJMFF043C24+ GTTGCAGCTGCTCGCGGATGCAATAACAATATCTTATCAAAGCTAACTGGGGTGATGAAA
____________________________________________________________
consensus GTTGCAGCTGCTCGCGGATGCAATAACAATATCTTATCAAAGCTAACTGGGGTGATGAAA
. : . : . : . : . : . :
rJMSF043O11+ ACTGAGTATCGCATTGCTTTGAGATCTTCTGTCCGAAATGATTTTGCTGAAGGTGTTCGT
rJMFF046F12+ ACTGAGTATCGCATTGCTTTGAGATCTTCTGTCCGAAATGATTTTGCTGAAGGTGTTCGT
rJMFF043C24+ ACTGAGTATCGCATTGCTTTGAGATCTTCTGTCCGAAATGATTTTGCTGAAGGTGTTCGT
____________________________________________________________
consensus ACTGAGTATCGCATTGCTTTGAGATCTTCTGTCCGAAATGATTTTGCTGAAGGTGTTCGT
. : . : . : . : . : . :
rJMSF043O11+ GCTGTTTTGGTGGACAAGGATCAGAATCCAAAATGGAATCCATCAAGCTTGGAGGAGGTT
rJMFF046F12+ GCTGTTTTGGTGGACAAGGATCAGAATCCAAAATGGAATCCATCAAGCTTGGAGGAGGTT
rJMFF043C24+ GCTGTTTTGGTGGACAAGGATCAGAATCCAAAATGGAATCCATCAAGCTTGGAGGAGGTT
____________________________________________________________
consensus GCTGTTTTGGTGGACAAGGATCAGAATCCAAAATGGAATCCATCAAGCTTGGAGGAGGTT
. : . : . : . : . : . :
rJMSF043O11+ AATCCCAGTGAGGTGGAGGCTGTATTTGAACCCCTAAGCCCAGAAATAGGAGACCTGAAT
rJMFF046F12+ AATCCCAGTGAGGTGGAGGCTGTATTTGAACCCCTAAGCCCAGAAATAGGAGACCTGAAT
rJMFF043C24+ AATCCCAGTGAGGTGGAGGCTGTATTTGAACCCCTAAGCCCAGAAATAGGAGACCTGAAT
____________________________________________________________
consensus AATCCCAGTGAGGTGGAGGCTGTATTTGAACCCCTAAGCCCAGAAATAGGAGACCTGAAT
. : . : . : . : . : . :
rJMSF043O11+ GTATAAGGTTCCTTTTTGTTGCCAGCAATAGTCAATAGGGATGGAACTTGGGAAGTATCC
rJMFF046F12+ GTATAAGGTTCCTTTTTGTTGCCAGCAATAGTCAATAGGGATGGAACTTGGGAAGTATCC
rJMFF043C24+ GTATAAGGTTCCTTTTTGTTGCCAGCAATAGTCAATAGGGATGGAACTTGGGAAGTATCC
____________________________________________________________
consensus GTATAAGGTTCCTTTTTGTTGCCAGCAATAGTCAATAGGGATGGAACTTGGGAAGTATCC
. : . : . : . : . : . :
rJMSF043O11+ CTCGTATGCGGTATGCCGAACATGAATAACCAATGTAAGACGAAGACCTATCCTATGTAC
rJMFF046F12+ CTCGTATGCGGTATGCCGAACATGAATAACCAATGTAAGACGAAGACCTATCCTATGTAC
rJMFF043C24+ CTCGTATGCGGTATGCCGAACATGAATAACCAATGTAAGACGAAGACCTATCCTATGTAC
____________________________________________________________
consensus CTCGTATGCGGTATGCCGAACATGAATAACCAATGTAAGACGAAGACCTATCCTATGTAC
. : . : . : . : . : . :
rJMSF043O11+ TATTTCAAATTT
rJMFF046F12+ TATTTCAAATTTAGACAGTCTTTTGATTTATGAATAAAGTTCAAATTAATGAAAGAGCAA
rJMFF043C24+ TATTTCAAATTTAGACAGTCTTTTGATTTATGAATAAAGTTCAAATTAATGAAAGAGCAA
____________________________________________________________
consensus TATTTCAAATTTAGACAGTCTTTTGATTTATGAATAAAGTTCAAATTAATGAAAGAGCAA
. : . : . : . : . : . :
rJMFF046F12+ ACAATCATACTCTTTCAT
rJMFF043C24+ ACAATCATACTCTTTCATACAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus ACAATCATACTCTTTCATACAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG