Contig 008317:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020K04Sequence511006064 (7)769008317 (7)ref|XP_006365407.1|2e-62PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMFF043B08Sequence631006064 (7)ref|XP_009624184.1|6e-15PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] 649008317 (7)ref|XP_006365407.1|7e-17PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMFN019O15Sequence626008317 (7)ref|XP_006365407.1|9e-29PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMSF004G18Sequence465001945 (6)ref|XP_010110030.1|9e-10Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966381008317 (7)
JMSF012L10Sequence521006064 (7)ref|XP_009624184.1|5e-07PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] 755008317 (7)ref|XP_006365407.1|2e-66PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMSF013O01Sequence360006064 (7)732008317 (7)ref|XP_006365407.1|1e-66PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMSF045L20Sequence686006064 (7)ref|XP_009624184.1|5e-55PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] 702008317 (7)ref|XP_006365407.1|6e-54PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF012L10+ CGT
                      ____________________________________________________________
consensus CGT
 
. : . : . : . : . : . :
rJMSF013O01+ TTCTAGAATATCACCCACAGATGCTTCAGGAGTATCTCCAGGGTGGAGATCAGACT
rJMSF012L10+ GAGATTCTAGAATATCACCCACAGATGCTTCAGGAGTATCTCCAGGGTGGAGATCAGACT
rJMSF045L20+ AGATCAGACT
rJMFF020K04+ TTCTAGAATATCACCCACAGATGCTTCAGGAGTATCTCCAGGGTGGAGATCAGACT
                      ____________________________________________________________
consensus GAGATTCTAGAATATCACCCACAGATGCTTCAGGAGTATCTCCAGGGTGGAGATCAGACT
 
. : . : . : . : . : . :
rJMSF013O01+ AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
rJMSF012L10+ AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
rJMSF045L20+ AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
rJMFF020K04+ AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
                      ____________________________________________________________
consensus AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
 
. : . : . : . : . : . :
rJMSF013O01+ GAGCATTATGGTAAAGGTGAAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
rJMSF012L10+ GAGCATTATGGTAAAGGTGAAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
rJMSF045L20+ GAGCATTATGGTAAAGGTGAAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
JMFN019O15- CACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
rJMFF020K04+ GAGCATTATGGTAAAGGTGGAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
                      ____________________________________________________________
consensus GAGCATTATGGTAAAGGTGAAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
 
. : . : . : . : . : . :
rJMSF013O01+ AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
rJMSF012L10+ AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
rJMSF045L20+ AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
JMFN019O15- AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
rJMFF020K04+ AGAGAGCGGGTGCCTGTACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
rJMFF043B08+ GCCTGTACTCAAAGGCTCTCATGAGAGTGATTNTGAAAAGCGAACCTCA
                      ____________________________________________________________
consensus AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
 
. : . : . : . : . : . :
rJMSF013O01+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
rJMSF012L10+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
rJMSF045L20+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
JMFN019O15- ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
rJMFF020K04+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
rJMFF043B08+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
                      ____________________________________________________________
consensus ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
 
. : . : . : . : . : . :
rJMSF013O01+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
rJMSF012L10+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
rJMSF045L20+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
JMFN019O15- TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
rJMFF020K04+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
rJMFF043B08+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
                      ____________________________________________________________
consensus TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
 
. : . : . : . : . : . :
rJMSF013O01+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMSF012L10+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMSF045L20+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMSF004G18+ CCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
JMFN019O15- AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMFF020K04+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMFF043B08+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
                      ____________________________________________________________
consensus AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
 
. : . : . : . : . : . :
rJMSF013O01+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMSF012L10+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMSF045L20+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMSF004G18+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
JMFN019O15- TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMFF020K04+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMFF043B08+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
                      ____________________________________________________________
consensus TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
 
. : . : . : . : . : . :
rJMSF013O01+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMSF012L10+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMSF045L20+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMSF004G18+ CGATTACTTTCTGCCATTTTGTGTTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
JMFN019O15- TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMFF020K04+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMFF043B08+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
                      ____________________________________________________________
consensus TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
 
. : . : . : . : . : . :
rJMSF013O01+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMSF012L10+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMSF045L20+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMSF004G18+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATNTGTTGTTTGATTGC
JMFN019O15- CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMFF020K04+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMFF043B08+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
                      ____________________________________________________________
consensus CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
 
. : . : . : . : . : . :
rJMSF013O01+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMSF012L10+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMSF045L20+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMSF004G18+ ACTGTTGTCATTCTTTGTTTATAGANCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGC
JMFN019O15- ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMFF020K04+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMFF043B08+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
                      ____________________________________________________________
consensus ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
 
. : . : . : . : . : . :
rJMSF013O01+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTC
rJMSF012L10+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTCACCGTTG
rJMSF045L20+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTCACCGTTG
rJMSF004G18+ ATATGTNGTTTTTCCTTNTGCCCTATATGTTGTATTTACTATTTTATAT
JMFN019O15- ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTCACCGTTG
rJMFF020K04+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATGTTGTCACCGTTG
rJMFF043B08+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATGTTGTCACCGTTG
                      ____________________________________________________________
consensus ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTCACCGTTG
 
. : . : . : . : . : . :
rJMSF012L10+ ATTATAATTTATCTGTAACGACTCGATATTAC
rJMSF045L20+ ATTATAATTTATCTGTAACGACTCGATATTAC
JMFN019O15- ATTATAATTTATCTGTAACGACTCGATATTACTGGACAGATTGAGTAAAACA
rJMFF020K04+ ATTATAATTTATCTGTAACGACTCGATATTACTGGACAGATTGAGTAAAACA
rJMFF043B08+ ATTATAATTTATCTGTAACGACTCGATATTACTGGACAGATTGAGTAAAACATTGTGCCA
                      ____________________________________________________________
consensus ATTATAATTTATCTGTAACGACTCGATATTACTGGACAGATTGAGTAAAACATTGTGCCA
 
. : . : . : . : . : . :
rJMFF043B08+ TTATGTGGTTTTGCTTGACAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TTATGTGGTTTTGCTTGACAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG