| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020K04 | Sequence | 511 | 006064 (7) | 769 | 008317 (7) | ref|XP_006365407.1| | 2e-62 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu | |||
| JMFF043B08 | Sequence | 631 | 006064 (7) | ref|XP_009624184.1| | 6e-15 | PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] | 649 | 008317 (7) | ref|XP_006365407.1| | 7e-17 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu |
| JMFN019O15 | Sequence | 626 | 008317 (7) | ref|XP_006365407.1| | 9e-29 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu | |||||
| JMSF004G18 | Sequence | 465 | 001945 (6) | ref|XP_010110030.1| | 9e-10 | Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966 | 381 | 008317 (7) | |||
| JMSF012L10 | Sequence | 521 | 006064 (7) | ref|XP_009624184.1| | 5e-07 | PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] | 755 | 008317 (7) | ref|XP_006365407.1| | 2e-66 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu |
| JMSF013O01 | Sequence | 360 | 006064 (7) | 732 | 008317 (7) | ref|XP_006365407.1| | 1e-66 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu | |||
| JMSF045L20 | Sequence | 686 | 006064 (7) | ref|XP_009624184.1| | 5e-55 | PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] | 702 | 008317 (7) | ref|XP_006365407.1| | 6e-54 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu |
This contig is upended
. : . : . : . : . : . :
rJMSF012L10+ CGT
____________________________________________________________
consensus CGT
. : . : . : . : . : . :
rJMSF013O01+ TTCTAGAATATCACCCACAGATGCTTCAGGAGTATCTCCAGGGTGGAGATCAGACT
rJMSF012L10+ GAGATTCTAGAATATCACCCACAGATGCTTCAGGAGTATCTCCAGGGTGGAGATCAGACT
rJMSF045L20+ AGATCAGACT
rJMFF020K04+ TTCTAGAATATCACCCACAGATGCTTCAGGAGTATCTCCAGGGTGGAGATCAGACT
____________________________________________________________
consensus GAGATTCTAGAATATCACCCACAGATGCTTCAGGAGTATCTCCAGGGTGGAGATCAGACT
. : . : . : . : . : . :
rJMSF013O01+ AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
rJMSF012L10+ AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
rJMSF045L20+ AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
rJMFF020K04+ AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
____________________________________________________________
consensus AGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCTTGAG
. : . : . : . : . : . :
rJMSF013O01+ GAGCATTATGGTAAAGGTGAAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
rJMSF012L10+ GAGCATTATGGTAAAGGTGAAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
rJMSF045L20+ GAGCATTATGGTAAAGGTGAAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
JMFN019O15- CACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
rJMFF020K04+ GAGCATTATGGTAAAGGTGGAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
____________________________________________________________
consensus GAGCATTATGGTAAAGGTGAAAGGAGCACTCCGCTTCAGAGGCAGCACGCCTCTTTGCCT
. : . : . : . : . : . :
rJMSF013O01+ AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
rJMSF012L10+ AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
rJMSF045L20+ AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
JMFN019O15- AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
rJMFF020K04+ AGAGAGCGGGTGCCTGTACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
rJMFF043B08+ GCCTGTACTCAAAGGCTCTCATGAGAGTGATTNTGAAAAGCGAACCTCA
____________________________________________________________
consensus AGAGAGCGGGTGCCTGCACTCAAAGGCTCTCATGAGAGTGATTTTGAAAAGCGAACCTCA
. : . : . : . : . : . :
rJMSF013O01+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
rJMSF012L10+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
rJMSF045L20+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
JMFN019O15- ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
rJMFF020K04+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
rJMFF043B08+ ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
____________________________________________________________
consensus ATTGCTTCAACTCTTCAGAGTCCACCAGATGGATCAGACAATACACAAAACGGATCAAAC
. : . : . : . : . : . :
rJMSF013O01+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
rJMSF012L10+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
rJMSF045L20+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
JMFN019O15- TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
rJMFF020K04+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
rJMFF043B08+ TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
____________________________________________________________
consensus TTTAGTGCTCGAAGCCTGCTAAAGAGTAATAGTATCAGTGCTTCAAAATGCATAGAAGTT
. : . : . : . : . : . :
rJMSF013O01+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMSF012L10+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMSF045L20+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMSF004G18+ CCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
JMFN019O15- AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMFF020K04+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
rJMFF043B08+ AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
____________________________________________________________
consensus AAAAGACGGGATGGAGAGGAAGATCCAATTGAAGAGCAAAATGAGGACGTTGATGAGTTA
. : . : . : . : . : . :
rJMSF013O01+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMSF012L10+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMSF045L20+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMSF004G18+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
JMFN019O15- TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMFF020K04+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
rJMFF043B08+ TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
____________________________________________________________
consensus TCTCAGAAAATGTCCAATCTCCATGCCTAATTCCACGGTTCAGCATATTACTCGACGGTT
. : . : . : . : . : . :
rJMSF013O01+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMSF012L10+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMSF045L20+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMSF004G18+ CGATTACTTTCTGCCATTTTGTGTTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
JMFN019O15- TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMFF020K04+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
rJMFF043B08+ TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
____________________________________________________________
consensus TGATTACTTTCTGCCATTTTGTGCTGCATCATTTGCGTGGGTCTGCAGCGTTTCATAGTA
. : . : . : . : . : . :
rJMSF013O01+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMSF012L10+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMSF045L20+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMSF004G18+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATNTGTTGTTTGATTGC
JMFN019O15- CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMFF020K04+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
rJMFF043B08+ CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
____________________________________________________________
consensus CGAAGTTTTGGGTAGAGGCTAACAGTAGTCTGCCAAAGTCGGTATTTGTTGTTTGATTGC
. : . : . : . : . : . :
rJMSF013O01+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMSF012L10+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMSF045L20+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMSF004G18+ ACTGTTGTCATTCTTTGTTTATAGANCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGC
JMFN019O15- ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMFF020K04+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
rJMFF043B08+ ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
____________________________________________________________
consensus ACTGTTGTCATTCTTTGTTTATAGAGCCAACACTCCCCAGTTATTTGGAGGCTGGCGAGT
. : . : . : . : . : . :
rJMSF013O01+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTC
rJMSF012L10+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTCACCGTTG
rJMSF045L20+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTCACCGTTG
rJMSF004G18+ ATATGTNGTTTTTCCTTNTGCCCTATATGTTGTATTTACTATTTTATAT
JMFN019O15- ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTCACCGTTG
rJMFF020K04+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATGTTGTCACCGTTG
rJMFF043B08+ ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATGTTGTCACCGTTG
____________________________________________________________
consensus ATATGTAGTTTTTCCTTTTGCCCTATATGTTGTATTTACTATTTTATATTGTCACCGTTG
. : . : . : . : . : . :
rJMSF012L10+ ATTATAATTTATCTGTAACGACTCGATATTAC
rJMSF045L20+ ATTATAATTTATCTGTAACGACTCGATATTAC
JMFN019O15- ATTATAATTTATCTGTAACGACTCGATATTACTGGACAGATTGAGTAAAACA
rJMFF020K04+ ATTATAATTTATCTGTAACGACTCGATATTACTGGACAGATTGAGTAAAACA
rJMFF043B08+ ATTATAATTTATCTGTAACGACTCGATATTACTGGACAGATTGAGTAAAACATTGTGCCA
____________________________________________________________
consensus ATTATAATTTATCTGTAACGACTCGATATTACTGGACAGATTGAGTAAAACATTGTGCCA
. : . : . : . : . : . :
rJMFF043B08+ TTATGTGGTTTTGCTTGACAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus TTATGTGGTTTTGCTTGACAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG