Contig 008316:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042P02Sequence614006507 (3)ref|XP_006441401.1|8e-88hypothetical protein CICLE_v10020565mg [Citrus clementina] gb|ESR54641.1| hypoth602008316 (2)gb|AAU90325.2|1e-56forever young oxidoreductase, putative [Solanum demissum]
JMSF021N15Sequence654006507 (3)ref|XP_006441401.1|3e-97hypothetical protein CICLE_v10020565mg [Citrus clementina] gb|ESR54641.1| hypoth763008316 (2)ref|XP_006493406.1|7e-96PREDICTED: retinol dehydrogenase 11-like [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF021N15+ TCCAGAGGA
                      ____________________________________________________________
consensus TCCAGAGGA
 
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rJMSF021N15+ TATGAATGTTGTGTCTGGGAAGAGAAAGTACGCAAGTTTAGTGGGATATTCAGGCAGTAA
                      ____________________________________________________________
consensus TATGAATGTTGTGTCTGGGAAGAGAAAGTACGCAAGTTTAGTGGGATATTCAGGCAGTAA
 
. : . : . : . : . : . :
rJMSF021N15+ GCTTGCGCAGGTTATGTACAGTAGCATGCTTCAGAAGAGACTGCCAGCTGAAGCTGGTAT
                      ____________________________________________________________
consensus GCTTGCGCAGGTTATGTACAGTAGCATGCTTCAGAAGAGACTGCCAGCTGAAGCTGGTAT
 
. : . : . : . : . : . :
rJMSF021N15+ AAATGTAATATGTGTTTCTCCTGGAATTGTTCAAACCAATGTTGCAAGAGATCTTCCTAG
rJMFF042P02+ AG
                      ____________________________________________________________
consensus AAATGTAATATGTGTTTCTCCTGGAATTGTTCAAACCAATGTTGCAAGAGATCTTCCTAG
 
. : . : . : . : . : . :
rJMSF021N15+ GTTCATTCAAGGTGCATATCGTTTGATACCATATCTTATATTCAATCCTGAGGAAGGTTC
rJMFF042P02+ GTTCATTCAAGGTGCATATCGTTTGATACCATATCTTATATTCAATCCTGAGGAAGGTTC
                      ____________________________________________________________
consensus GTTCATTCAAGGTGCATATCGTTTGATACCATATCTTATATTCAATCCTGAGGAAGGTTC
 
. : . : . : . : . : . :
rJMSF021N15+ TAGAAGTACACTTTTTGCAGCCACTGATCCTCAAGTTCCAGAGTACTGTGAGACGTTGAA
rJMFF042P02+ TAGAAGTACACTTTTTGCAGCCACTGATCCTCAAGTTCCAGAGTACTGTGAGACGTTGAA
                      ____________________________________________________________
consensus TAGAAGTACACTTTTTGCAGCCACTGATCCTCAAGTTCCAGAGTACTGTGAGACGTTGAA
 
. : . : . : . : . : . :
rJMSF021N15+ AGCGGATGATTGGCCAGTCTGCGCTTACCTTTCTCAAGATTGCCGTCCAATGAATCCCTC
rJMFF042P02+ AGCGGATGATTGGCCAGTCTGCGCTTACCTTTCTCAAGATTGCCGTCCAATGAATCCCTC
                      ____________________________________________________________
consensus AGCGGATGATTGGCCAGTCTGCGCTTACCTTTCTCAAGATTGCCGTCCAATGAATCCCTC
 
. : . : . : . : . : . :
rJMSF021N15+ CGAAGAATCACACAACCTTGAAACTTCTTACAAAGTTTGGGAGAGGACCTTGGAACTGAT
rJMFF042P02+ CGAAGAATCACACAACCTTGAAACTTCTTACAAAGTTTGGGAGAAGACCTTGGAACTGAT
                      ____________________________________________________________
consensus CGAAGAATCACACAACCTTGAAACTTCTTACAAAGTTTGGGAGAGGACCTTGGAACTGAT
 
. : . : . : . : . : . :
rJMSF021N15+ TGGCCTTCCCACGGATGCAGTTGAGAGGCTTATCGAGGGGGAAGAAGTCGAGTGCAAATA
rJMFF042P02+ TGGCCTTCCCACGGATGCAGTTGAGAGGCTTATCGAGGGGGAAGAAGTCGAGTGCAAATA
                      ____________________________________________________________
consensus TGGCCTTCCCACGGATGCAGTTGAGAGGCTTATCGAGGGGGAAGAAGTCGAGTGCAAATA
 
. : . : . : . : . : . :
rJMSF021N15+ TGGAAAACCGAAGGAATAGCTCAGTTGTGTGGCTTGTTTATGCACCTTCACGGTTAGTTG
rJMFF042P02+ TGGAAAACCGAAGGAATAGCTCAGTTGTGTGGCTTGTTTATGCACCTTCACGGTTAGTTG
                      ____________________________________________________________
consensus TGGAAAACCGAAGGAATAGCTCAGTTGTGTGGCTTGTTTATGCACCTTCACGGTTAGTTG
 
. : . : . : . : . : . :
rJMSF021N15+ TAAGCTATAGGTCACCGCAGATTCAGCCAGCATTGTTTAACGATCATATAGGTTCCTTTT
rJMFF042P02+ TAAGCTATAGGTCACCGCAGATTCAGCCAGCATTGTTTAACGATCATATAGGTTCCTTTT
                      ____________________________________________________________
consensus TAAGCTATAGGTCACCGCAGATTCAGCCAGCATTGTTTAACGATCATATAGGTTCCTTTT
 
. : . : . : . : . : . :
rJMSF021N15+ TGGAGTGGTTGGATGACAAGGAGACGATGGCCCTTTACACAATGGACCAAACTGGCCTTA
rJMFF042P02+ TGGAGTGGTTGGATGACAAGGAGACGATGGCCCTTTACACAATGGACCAAACTGGCCTTA
                      ____________________________________________________________
consensus TGGAGTGGTTGGATGACAAGGAGACGATGGCCCTTTACACAATGGACCAAACTGGCCTTA
 
. : . : . : . : . : . :
rJMSF021N15+ AGATTCAACCTGAATTTGTATGCTTTACTTCTAGCTTTCAACTGGTAGTAAGTTGTTTAT
rJMFF042P02+ AGATTCAACCTGAATTTGTATGCTTTACTTCTAGCTTTCAACTGGTAGTAAGTTGTTTAT
                      ____________________________________________________________
consensus AGATTCAACCTGAATTTGTATGCTTTACTTCTAGCTTTCAACTGGTAGTAAGTTGTTTAT
 
. : . : . : . : . : . :
rJMSF021N15+ CTCCTTCACGTATAAAAGAGTTGTATAACTTTTT
rJMFF042P02+ CTCCTTCACGTATAAAAGAGTTGTATAACTTTTTAATCATAACTTATACGTTTGATGAGC
                      ____________________________________________________________
consensus CTCCTTCACGTATAAAAGAGTTGTATAACTTTTTAATCATAACTTATACGTTTGATGAGC