Contig 008309:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027A04Sequence549008309 (5)ref|XP_008229671.1|3e-62PREDICTED: secoisolariciresinol dehydrogenase-like [Prunus mume]696008309 (5)ref|XP_008229660.1|4e-53PREDICTED: secoisolariciresinol dehydrogenase-like [Prunus mume]
JMFF037E08Sequence121008309 (5)
JMFF042C06Sequence655008309 (5)ref|XP_008229671.1|4e-78PREDICTED: secoisolariciresinol dehydrogenase-like [Prunus mume]597008309 (5)ref|XP_007206370.1|1e-64hypothetical protein PRUPE_ppa017863mg [Prunus persica] gb|EMJ07569.1| hypotheti

Alignment

This contig is upended


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JMFF027A04-                        ATCATCTTATTATCAACCAACCTAAATCTCTCAATGGCCTCAACTTC
JMFF042C06-                               TATTATCAACCAACCTAAATCTCTCAATGGCCTCAACTTC
                      ____________________________________________________________
consensus                          ATCATCTTATTATCAACCAACCTAAATCTCTCAATGGCCTCAACTTC
 
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JMFF027A04-           TGCAGATAGAAGACTTGAAGGAAAGGTTGCCCTTGTAACGGGCGGCACTAATATAATTGG
JMFF042C06-           TGCAGATAGAAGACTTGAAGGAAAGGTTGCCCTTGTAACGGGCGGCACTAATATAATTGG
                      ____________________________________________________________
consensus             TGCAGATAGAAGACTTGAAGGAAAGGTTGCCCTTGTAACGGGCGGCACTAATATAATTGG
 
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JMFF027A04-           CGAGCCAATTATAAAGCTCTTCTTGAAACATGGAGCTAAGGTCGCGTTTACGGACACCGA
JMFF042C06-           CGAGCCAATTATAAAGCTCTTCTTGAAACATGGAGCTAAGGTCGCGTTTACGGACACCGA
                      ____________________________________________________________
consensus             CGAGCCAATTATAAAGCTCTTCTTGAAACATGGAGCTAAGGTCGCGTTTACGGACACCGA
 
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JMFF027A04-           TGACAAGCTGGGCGAAAAACTTTGCCAGGATTTGGACCCGGCCGCCGCCGTTTACTTCCA
JMFF042C06-           TGACAAGCTGGGCGAAAAACTTTGCCAGGATTTGGACCCGGCCGCCGCCGTTTACTTCCA
                      ____________________________________________________________
consensus             TGACAAGCTGGGCGAAAAACTTTGCCAGGATTTGGACCCGGCCGCCGCCGTTTACTTCCA
 
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JMFF027A04-           CTGCAACATCGTGGAGGAATCCGACGTCGAAAGTGCGGTGGACGCCACCGTGGCCAAGTT
JMFF042C06-           CTGCAACATCGTGGAGGAATCCGACGTCGAAAGTGCGGTGGACGCCACCGTGGCCAAGTT
rJMFF027A04+              AACATNGTGGAGGAATCNGANGTNGAAAGTGCGGTGGACGCCNCCGTGGCCAAGTT
                      ____________________________________________________________
consensus             CTGCAACATCGTGGAGGAATCCGACGTCGAAAGTGCGGTGGACGCCACCGTGGCCAAGTT
 
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JMFF027A04-           CGGGAAGCTTGATATCATGGTGAACGCAGCGACGGCGCTGGGAGTGACGAAGCCCAGCAT
JMFF042C06-           CGGGAAGCTTGATATCATGGTGAACGCAGCGACGGCGCTGGGAGTGACGAAGCCCAGCAT
rJMFF027A04+          CGGGAAGCTTGATATCATGGTGAANGCAGNGACGGCGNTGGGAGTGANGAAGCCCAGCAT
                      ____________________________________________________________
consensus             CGGGAAGCTTGATATCATGGTGAACGCAGCGACGGCGCTGGGAGTGACGAAGCCCAGCAT
 
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JMFF027A04-           CCTCCAGAACGACAAGTCCGAGTTCGAGCAGGTGATGGGCGTGAACGTGGTGGGCACTTT
JMFF042C06-           CCTCCAGAACGACAAGTCCGAGTTCGAGCAGGTGATGGGCGTGAACGTGGTGGGCACTTT
rJMFF027A04+          CCTCCAGAACGACAAGTCCGAGTTNGAGCAGGTGATGGGCGTGAACGTGGTGGGCACTTT
rJMFF042C06+            TCCAGAACGACAAGTCCGAGTTCGAGCAGGTGATGGGCGTGAACGTGGTGGGCACTTT
                      ____________________________________________________________
consensus             CCTCCAGAACGACAAGTCCGAGTTCGAGCAGGTGATGGGCGTGAACGTGGTGGGCACTTT
 
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JMFF027A04-           CCTCGGCACAAAGCACGCGGCGCGCGCGATGATCCCGAACGGCGCCGGCTCCATCGTCAA
JMFF042C06-           CCTCGGCACAAAGCACGCGGCGCGCGCGATGATCCCGAACGGCGCCGGCTCCATCGTCAA
rJMFF027A04+          CCTCGGCACAAAGCACGCGGCGCGCGCGATGATCCCGAACGGCGCCGGCTCCATCGTCAA
rJMFF042C06+          CCTCGGCACAAAGCACGCGGCGCGCGCGATGATCCCGAACGGCGCCGGCTCCATCGTCAA
                      ____________________________________________________________
consensus             CCTCGGCACAAAGCACGCGGCGCGCGCGATGATCCCGAACGGCGCCGGCTCCATCGTCAA
 
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JMFF027A04-           CCTCGGCAGCGTGGCGTCCACCACGGC-GGGGACCACGCCGCACTCGTACACCAGCGCCA
JMFF042C06-           CCTCGGCAGCGTGGCGTCCACCACGGC-GGGGACCACGCCGCACTCGTACACCAGCGCCA
rJMFF027A04+          CCTCGGCAGCGTGGCGTCCACCACGGCGGGGGACCACGCCGCACTCGTACACCAGCGCCA
rJMFF042C06+          CCTCGGCAGCGTGGCGTCCACCACGGC-GGGGACCACGCCGCACTCGTACACCAGCGCCA
                      ____________________________________________________________
consensus             CCTCGGCAGCGTGGCGTCCACCACGGC-GGGGACCACGCCGCACTCGTACACCAGCGCCA
 
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JMFF027A04-           AGCACGCGGTGCTGGGGCTGACG                                     
JMFF042C06-           AGCACGCGGTGCTGGGGCTGACGAAAAACACGGCGGTGGAGCTGGGACGGTGCGGGATTC
rJMFF027A04+          AGCACGCGGTGCTGGGGCTGACGAAAAACACGGCGGTGGAGCTGGGACGGTGCGGGATTC
rJMFF042C06+          AGCACGCGGTGCTGGGGCTGACGAAAAACACGGCGGTGGAGCTGGGACGGTGCGGGATTC
                      ____________________________________________________________
consensus             AGCACGCGGTGCTGGGGCTGACGAAAAACACGGCGGTGGAGCTGGGACGGTGCGGGATTC
 
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JMFF042C06-           GAGTCAACTGCGTTTCTCCGTTCATCGTGTGCAACCCGGTGGGGATGAAGGCTTTGGGGT
rJMFF027A04+          GAGTCAACTGCGTTTCTCCGTTCATCGTGTGCAACCCGGTGGGGATGAAGGCTTTGGGGT
rJMFF042C06+          GAGTCAACTGCGTTTCTCCGTTCATCGTGTGCAACCCGGTGGGGATGAAGGCTTTGGGGT
                      ____________________________________________________________
consensus             GAGTCAACTGCGTTTCTCCGTTCATCGTGTGCAACCCGGTGGGGATGAAGGCTTTGGGGT
 
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JMFF042C06-           TGACAACCGATGAGGA                                            
rJMFF027A04+          TGACAACCGATGAGGATCTCAAGAAGCTTTACAACAACCTCAAAGGGGCGGTGCTGAAGG
rJMFF042C06+          TGACAACCGATGAGGATCTCAAGAAGCTTTACAACAACCTCAAAGGGGCGGTGCTGAAGG
                      ____________________________________________________________
consensus             TGACAACCGATGAGGATCTCAAGAAGCTTTACAACAACCTCAAAGGGGCGGTGCTGAAGG
 
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rJMFF027A04+          CGGAAGATGTGGCGGAGGCGGCGCTGTACTTGGCCTCCGACGAGTCGAAGTATGTGAACG
rJMFF042C06+          CGGAAGATGTGGCGGAGGCGGCGCTGTACTTGGCCTCCGACGAGTCGAAGTATGTGAACG
                      ____________________________________________________________
consensus             CGGAAGATGTGGCGGAGGCGGCGCTGTACTTGGCCTCCGACGAGTCGAAGTATGTGAACG
 
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rJMFF027A04+          GGCATAACCTGGTCATTGATGGAGGTTTTAGTACCATGAATTCCACTCTATGCATCTTCC
rJMFF042C06+          GGCATAACCTGGTCATTGATGGAGGTTTTAGTACCATGAATTCCACTCTATGCATCTTCC
                      ____________________________________________________________
consensus             GGCATAACCTGGTCATTGATGGAGGTTTTAGTACCATGAATTCCACTCTATGCATCTTCC
 
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rJMFF027A04+          CACCAAAGTAACTTCATCATTTAATTAAAAAGTGTGATTTTCGTACAAGCTGTTTAAATC
rJMFF037E08+              AAAGTAACTTCATCATTTAATTAAAAAGTGTGATTTTCGTACAAGCTGTTTAAATC
rJMFF042C06+          CACCAAAGTAACTTCATCATTTAATTAAAAAGTGTGATTTTCGTACAAGCTGTTTAAATC
                      ____________________________________________________________
consensus             CACCAAAGTAACTTCATCATTTAATTAAAAAGTGTGATTTTCGTACAAGCTGTTTAAATC
 
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rJMFF027A04+          GTTCATAGTTGATCAATATGTGACTCTCAATAAAAGT                       
rJMFF037E08+          GTTCATAGTTGATCAATATGTGACTCTCAATAAAAGT                       
rJMFF042C06+          GTTCATAGTTGATCAATATGTGACTCTCAATAAAAGTGGAACTTCAAAGTTTGGGATTAT
                      ____________________________________________________________
consensus             GTTCATAGTTGATCAATATGTGACTCTCAATAAAAGTGGAACTTCAAAGTTTGGGATTAT