Contig 008308:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049L23+              TGTACGCCAGCATGGGAAGCCTGGCACGCCTCAACGCCGATCAGATGGCCGAGATC
                      ____________________________________________________________
consensus                 TGTACGCCAGCATGGGAAGCCTGGCACGCCTCAACGCCGATCAGATGGCCGAGATC
 
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rJMSF049L23+          GGTCTCGGTTTAGAAGCCACAAAAAGACCCTTCATTTGGGTATTGGGAAGAGGCGAAAAA
                      ____________________________________________________________
consensus             GGTCTCGGTTTAGAAGCCACAAAAAGACCCTTCATTTGGGTATTGGGAAGAGGCGAAAAA
 
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rJMSF049L23+          CTCAACACCATAGAGAACTGGATCGCCAGCAACGGGTTTGAAGAACGTAACAAAGAGAAA
                      ____________________________________________________________
consensus             CTCAACACCATAGAGAACTGGATCGCCAGCAACGGGTTTGAAGAACGTAACAAAGAGAAA
 
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rJMSF049L23+          GCCCTGGTGGTCCGAGGCTGGGCCCCGCAAGTGCTCATCCTGGCCCACCAGGCAGTCGGG
rJMFF042B08+                                                          CAGGCAGTCGGG
                      ____________________________________________________________
consensus             GCCCTGGTGGTCCGAGGCTGGGCCCCGCAAGTGCTCATCCTGGCCCACCAGGCAGTCGGG
 
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rJMSF049L23+          GGATTCTTGACACACTGCGGGTGGAACTCGACTCTTGAAGCGATATCTGCCGGGGTGCCA
rJMFF042B08+          GGATTCTTGACACACTGCGGGTGGAACTCGACTCTTGAAGCGATATCTGCCGGGGTGCCA
                      ____________________________________________________________
consensus             GGATTCTTGACACACTGCGGGTGGAACTCGACTCTTGAAGCGATATCTGCCGGGGTGCCA
 
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rJMSF049L23+          ATGGCAACGTGGCCACTCTTCGCGGAGCAATTCTGCAACGAGAAGCTGGTGGTGGAGGTG
rJMFF042B08+          ATGGCAACGTGGCCACTCTTCGCGGAGCAATTCTGCAACGAGAAGCTGGTGGTGGAGGTG
                      ____________________________________________________________
consensus             ATGGCAACGTGGCCACTCTTCGCGGAGCAATTCTGCAACGAGAAGCTGGTGGTGGAGGTG
 
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rJMSF049L23+          CTGGGGATTGGCGTGAGCCTTGGCGTGCAGGTGCCTGTGAAGTGGGGAGATGAAGACAAG
rJMFF042B08+          CTGGGGATTGGCGTGAGCCTTGGCGTGCAGGTGCCTGTGAAGTGGGGAGATGAAGACAAG
                      ____________________________________________________________
consensus             CTGGGGATTGGCGTGAGCCTTGGCGTGCAGGTGCCTGTGAAGTGGGGAGATGAAGACAAG
 
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rJMSF049L23+          ATTGGGGTTTTGGTGAAGAAGGAAGAGATCAAAGAAGCCTTGGAGAAAGTAATGGATGAA
rJMFF042B08+          ATTGGGGTTTTGGTGAAGAAGGAAGAGATCAAAGAAGCCTTGGAGAAAGTAATGGATGAA
                      ____________________________________________________________
consensus             ATTGGGGTTTTGGTGAAGAAGGAAGAGATCAAAGAAGCCTTGGAGAAAGTAATGGATGAA
 
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rJMSF049L23+          GGAGATGAGGGGGAAGAGAGGAGGAAGAAGGCGAGAGAAGCAGGTGAAATGGCTAAGAAA
rJMFF042B08+          GGAGATGAGGGGGAAGAGAGGAGGAAGAAGGCGAGAGAAGCAGGTGAAATGGCTAAGAAA
                      ____________________________________________________________
consensus             GGAGATGAGGGGGAAGAGAGGAGGAAGAAGGCGAGAGAAGCAGGTGAAATGGCTAAGAAA
 
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rJMSF049L23+          GCAATGGAGGAATGTGGTTCTTCTACCCGCAACTTGTCTGCTCTAATCCAAGAAATATCA
rJMFF042B08+          GCAATGGAGGAATGTGGTTCTTCTACCCGCAACTTGTCTGCTCTAATCCAAGAAATATCA
                      ____________________________________________________________
consensus             GCAATGGAGGAATGTGGTTCTTCTACCCGCAACTTGTCTGCTCTAATCCAAGAAATATCA
 
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rJMSF049L23+          AACAGCCATTGCAAGATTGGTCCGTGATCAAATATCTTGTCATCAACATTCACTTAGATA
rJMFF042B08+          AACAGCCATTGCAAGATTGGTCCGTGATCAAATATCTTGTCATCAACATTCACTTAGATA
                      ____________________________________________________________
consensus             AACAGCCATTGCAAGATTGGTCCGTGATCAAATATCTTGTCATCAACATTCACTTAGATA
 
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rJMSF049L23+          GGAATGGGTAATTACTAGTAACTTAAATAATATTTTGGTGTTGATGCAATTAATAATCCC
rJMFF042B08+          GGAATGGGTAATTACTAGTAACTTAAATAATATTTTGGTGTTGATGCAATTAATAATCCC
                      ____________________________________________________________
consensus             GGAATGGGTAATTACTAGTAACTTAAATAATATTTTGGTGTTGATGCAATTAATAATCCC
 
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rJMSF049L23+          ATCCCATC                                                    
rJMFF042B08+          ATCCCATCATGTATAAATTCTATCACCTCTGTATATGAAAGTATACTGTATGTTAAATGC
                      ____________________________________________________________
consensus             ATCCCATCATGTATAAATTCTATCACCTCTGTATATGAAAGTATACTGTATGTTAAATGC