clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004C15 | Sequence | 554 | 001613 (5) | ref|XP_002308618.1| | 9e-98 | aspartate transaminase family protein [Populus trichocarpa] gb|EEE92141.1| aspar | 740 | 008306 (6) | ref|XP_009762342.1| | 9e-130 | PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris] |
JMFF007P24 | Sequence | 573 | 001613 (5) | ref|XP_010693429.1| | 5e-94 | PREDICTED: aspartate aminotransferase, cytoplasmic [Beta vulgaris subsp. vulgar | 769 | 008306 (6) | ref|XP_009762342.1| | 1e-119 | PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris] |
JMFF012N21 | Sequence | 490 | 001613 (5) | ref|XP_002308618.1| | 1e-56 | aspartate transaminase family protein [Populus trichocarpa] gb|EEE92141.1| aspar | 417 | 008306 (6) | ref|XP_008220042.1| | 7e-50 | PREDICTED: aspartate aminotransferase, cytoplasmic [Prunus mume] |
JMFF017F14 | Sequence | 592 | 001613 (5) | emb|CDP03316.1| | 1e-108 | unnamed protein product [Coffea canephora] | 743 | 008306 (6) | ref|XP_009782665.1| | 3e-101 | PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris] |
JMFF026M08 | Sequence | 688 | 008306 (6) | ref|XP_009762342.1| | 1e-100 | PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris] | |||||
JMFF041M07 | Sequence | 644 | 001613 (5) | emb|CDP03316.1| | 8e-99 | unnamed protein product [Coffea canephora] | 573 | 008306 (6) | ref|XP_009617506.1| | 3e-68 | PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF017F14+ GGGGTAGACC
____________________________________________________________
consensus GGGGTAGACC
. : . : . : . : . : . :
rJMFF017F14+ CAACTATTGAGCAGTGGGGGAAAATCAGGGAGCTGCTACGATCCAAAGGGTTGTTACCTT
rJMFF004C15+ TATTGAGCAGTGGGGGAAAATCAGGGAGCTGATACGATCCAAAGGGTTGTTACCTT
rJMFF007P24+ GGGTTGTTACCTT
____________________________________________________________
consensus CAACTATTGAGCAGTGGGGGAAAATCAGGGAGCTGCTACGATCCAAAGGGTTGTTACCTT
. : . : . : . : . : . :
rJMFF017F14+ TCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGCAATCTTGATGCAGATGCAAAGTCTG
rJMFF004C15+ TCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGCAATCTTGATGCAGATGCAAAGTCTG
rJMFF007P24+ TCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGCAATCTTGGTGCAGATGCAAAGTCTG
____________________________________________________________
consensus TCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGCAATCTTGATGCAGATGCAAAGTCTG
. : . : . : . : . : . :
rJMFF017F14+ TTCGCCTTTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
rJMFF004C15+ TTCGCCTTTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
rJMFF026M08+ TTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
rJMFF007P24+ TTCGCCTTTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
____________________________________________________________
consensus TTCGCCTTTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
. : . : . : . : . : . :
rJMFF017F14+ TGCGGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
rJMFF004C15+ TG-GGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
rJMFF026M08+ TG-GGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
rJMFF007P24+ TG-GGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
____________________________________________________________
consensus TG-GGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
. : . : . : . : . : . :
rJMFF017F14+ GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
rJMFF004C15+ GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
rJMFF026M08+ GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
rJMFF007P24+ GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
rJMFF041M07+ CTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
____________________________________________________________
consensus GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
. : . : . : . : . : . :
rJMFF017F14+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
rJMFF004C15+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
rJMFF012N21+ GACAGGATAATGTTTGAGGAATGG
rJMFF026M08+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
rJMFF007P24+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
rJMFF041M07+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
____________________________________________________________
consensus CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
. : . : . : . : . : . :
rJMFF017F14+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCACCATGCGAAAACAACTTTTTGAG
rJMFF004C15+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
rJMFF012N21+ TCTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
rJMFF026M08+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
rJMFF007P24+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
rJMFF041M07+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
____________________________________________________________
consensus ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
. : . : . : . : . : . :
rJMFF017F14+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF004C15+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF012N21+ GCTTTAATAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF026M08+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF007P24+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF041M07+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
____________________________________________________________
consensus GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
. : . : . : . : . : . :
rJMFF017F14+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF004C15+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF012N21+ TTTACTTTCACGGGATTGAATGNTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF026M08+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF007P24+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF041M07+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
____________________________________________________________
consensus TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
. : . : . : . : . : . :
rJMFF017F14+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAGTTCTGAGAAAGTTCCTCAT
rJMFF004C15+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAGTTCTGAGAAAGTTCCTCAT
rJMFF012N21+ TACATGACAGNTGATGGGAGAATTAGCATGGCAGGGNTTAGTTCTGAGAAAGTTCCTCAT
rJMFF026M08+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAATTCTGAGAAAGTTCCTCAT
rJMFF007P24+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAATTCTGAGAAAGTTCCTCAT
rJMFF041M07+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAATTCTGAGAAAGTTCCTCAT
____________________________________________________________
consensus TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAGTTCTGAGAAAGTTCCTCAT
. : . : . : . : . : . :
rJMFF017F14+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF004C15+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF012N21+ NTTGNTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF026M08+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF007P24+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF041M07+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
____________________________________________________________
consensus CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
. : . : . : . : . : . :
rJMFF017F14+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF004C15+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF012N21+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF026M08+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF007P24+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF041M07+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
____________________________________________________________
consensus CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
. : . : . : . : . : . :
rJMFF017F14+ AAATGGATTCAAA
rJMFF004C15+ AAATGGATCCAAATAAAATTTCACC
rJMFF012N21+ AAATGGATTCAAATAAAATTTCACCA
rJMFF026M08+ AAATGGATTCAAATAAAATTTCACCATGGACACATGGAGACATCATTTTGAATGTAATCA
rJMFF007P24+ AAATGGATTCAAATAAAATTTCACCATGGACACATGGAGACATCATTTTGAATGTAATCA
rJMFF041M07+ AAATGGATTCAAATAAAATTTCACCATGGACACATGGAGACATCATTTTGAATGTAATCA
____________________________________________________________
consensus AAATGGATTCAAATAAAATTTCACCATGGACACATGGAGACATCATTTTGAATGTAATCA
. : . : . : . : . : . :
rJMFF026M08+ TTTCGCCTAACAGGGAATTTTTCTTATTAATATTAT
rJMFF007P24+ TTTCGCCTAACAGGGAATTTTTCTTATTAATATTAT
rJMFF041M07+ TTTCGCCTAACAGGGAATTTTTCTTATTAATATTATCAACCCTGTTAGCTCATTAGCCTT
____________________________________________________________
consensus TTTCGCCTAACAGGGAATTTTTCTTATTAATATTATCAACCCTGTTAGCTCATTAGCCTT