Contig 008306:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004C15Sequence554001613 (5)ref|XP_002308618.1|9e-98aspartate transaminase family protein [Populus trichocarpa] gb|EEE92141.1| aspar740008306 (6)ref|XP_009762342.1|9e-130PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris]
JMFF007P24Sequence573001613 (5)ref|XP_010693429.1|5e-94PREDICTED: aspartate aminotransferase, cytoplasmic [Beta vulgaris subsp. vulgar769008306 (6)ref|XP_009762342.1|1e-119PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris]
JMFF012N21Sequence490001613 (5)ref|XP_002308618.1|1e-56aspartate transaminase family protein [Populus trichocarpa] gb|EEE92141.1| aspar417008306 (6)ref|XP_008220042.1|7e-50PREDICTED: aspartate aminotransferase, cytoplasmic [Prunus mume]
JMFF017F14Sequence592001613 (5)emb|CDP03316.1|1e-108unnamed protein product [Coffea canephora]743008306 (6)ref|XP_009782665.1|3e-101PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris]
JMFF026M08Sequence688008306 (6)ref|XP_009762342.1|1e-100PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris]
JMFF041M07Sequence644001613 (5)emb|CDP03316.1|8e-99unnamed protein product [Coffea canephora]573008306 (6)ref|XP_009617506.1|3e-68PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF017F14+ GGGGTAGACC
                      ____________________________________________________________
consensus GGGGTAGACC
 
. : . : . : . : . : . :
rJMFF017F14+ CAACTATTGAGCAGTGGGGGAAAATCAGGGAGCTGCTACGATCCAAAGGGTTGTTACCTT
rJMFF004C15+ TATTGAGCAGTGGGGGAAAATCAGGGAGCTGATACGATCCAAAGGGTTGTTACCTT
rJMFF007P24+ GGGTTGTTACCTT
                      ____________________________________________________________
consensus CAACTATTGAGCAGTGGGGGAAAATCAGGGAGCTGCTACGATCCAAAGGGTTGTTACCTT
 
. : . : . : . : . : . :
rJMFF017F14+ TCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGCAATCTTGATGCAGATGCAAAGTCTG
rJMFF004C15+ TCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGCAATCTTGATGCAGATGCAAAGTCTG
rJMFF007P24+ TCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGCAATCTTGGTGCAGATGCAAAGTCTG
                      ____________________________________________________________
consensus TCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGCAATCTTGATGCAGATGCAAAGTCTG
 
. : . : . : . : . : . :
rJMFF017F14+ TTCGCCTTTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
rJMFF004C15+ TTCGCCTTTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
rJMFF026M08+ TTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
rJMFF007P24+ TTCGCCTTTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
                      ____________________________________________________________
consensus TTCGCCTTTTCGTTGCAGACGGTGGTGAATTGCTTATGGCACAGAGTTATGCAAAAAATA
 
. : . : . : . : . : . :
rJMFF017F14+ TGCGGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
rJMFF004C15+ TG-GGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
rJMFF026M08+ TG-GGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
rJMFF007P24+ TG-GGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
                      ____________________________________________________________
consensus TG-GGACTGTATGGGGAACGTGTCGGTGCCCTTAGCATTGTTTGCAGAAATGCAGAAGTA
 
. : . : . : . : . : . :
rJMFF017F14+ GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
rJMFF004C15+ GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
rJMFF026M08+ GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
rJMFF007P24+ GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
rJMFF041M07+ CTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
                      ____________________________________________________________
consensus GCCAGCAGGGTTGAAAGCCAATTGAAGCTAGTCATCAGGCCTATGTACTCAAGTCCGCCC
 
. : . : . : . : . : . :
rJMFF017F14+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
rJMFF004C15+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
rJMFF012N21+ GACAGGATAATGTTTGAGGAATGG
rJMFF026M08+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
rJMFF007P24+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
rJMFF041M07+ CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
                      ____________________________________________________________
consensus CTTCATGGTGCATCCATCGTTGCTACCATACTCAAGGACAGGATAATGTTTGAGGAATGG
 
. : . : . : . : . : . :
rJMFF017F14+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCACCATGCGAAAACAACTTTTTGAG
rJMFF004C15+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
rJMFF012N21+ TCTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
rJMFF026M08+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
rJMFF007P24+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
rJMFF041M07+ ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
                      ____________________________________________________________
consensus ACTGTTGAACTGAAAGCAATGGCTGATCGAATCATCAGCATGCGAAAACAACTTTTTGAG
 
. : . : . : . : . : . :
rJMFF017F14+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF004C15+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF012N21+ GCTTTAATAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF026M08+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF007P24+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
rJMFF041M07+ GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
                      ____________________________________________________________
consensus GCTTTACTAGCTAAAGGCACACCAGGTGACTGGAGTCATATTATCAAACAAATTGGAATG
 
. : . : . : . : . : . :
rJMFF017F14+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF004C15+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF012N21+ TTTACTTTCACGGGATTGAATGNTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF026M08+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF007P24+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
rJMFF041M07+ TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
                      ____________________________________________________________
consensus TTTACTTTCACGGGATTGAATGCTGAGCAAGTTGCCTTTATGACCCGAAAGCATCACATC
 
. : . : . : . : . : . :
rJMFF017F14+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAGTTCTGAGAAAGTTCCTCAT
rJMFF004C15+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAGTTCTGAGAAAGTTCCTCAT
rJMFF012N21+ TACATGACAGNTGATGGGAGAATTAGCATGGCAGGGNTTAGTTCTGAGAAAGTTCCTCAT
rJMFF026M08+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAATTCTGAGAAAGTTCCTCAT
rJMFF007P24+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAATTCTGAGAAAGTTCCTCAT
rJMFF041M07+ TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAATTCTGAGAAAGTTCCTCAT
                      ____________________________________________________________
consensus TACATGACAGCTGATGGGAGAATTAGCATGGCAGGGCTTAGTTCTGAGAAAGTTCCTCAT
 
. : . : . : . : . : . :
rJMFF017F14+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF004C15+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF012N21+ NTTGNTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF026M08+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF007P24+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
rJMFF041M07+ CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
                      ____________________________________________________________
consensus CTTGCTGAAGCAATACATGCAGCAGTTACCAAATTAGCCTAAATCTATAGTTTACAGAAG
 
. : . : . : . : . : . :
rJMFF017F14+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF004C15+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF012N21+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF026M08+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF007P24+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
rJMFF041M07+ CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
                      ____________________________________________________________
consensus CCTTTTGTCAATAAGTTTTCAGTTTTGAGCTTGACTTTCTATGTATTTTGATACTGCTTG
 
. : . : . : . : . : . :
rJMFF017F14+ AAATGGATTCAAA
rJMFF004C15+ AAATGGATCCAAATAAAATTTCACC
rJMFF012N21+ AAATGGATTCAAATAAAATTTCACCA
rJMFF026M08+ AAATGGATTCAAATAAAATTTCACCATGGACACATGGAGACATCATTTTGAATGTAATCA
rJMFF007P24+ AAATGGATTCAAATAAAATTTCACCATGGACACATGGAGACATCATTTTGAATGTAATCA
rJMFF041M07+ AAATGGATTCAAATAAAATTTCACCATGGACACATGGAGACATCATTTTGAATGTAATCA
                      ____________________________________________________________
consensus AAATGGATTCAAATAAAATTTCACCATGGACACATGGAGACATCATTTTGAATGTAATCA
 
. : . : . : . : . : . :
rJMFF026M08+ TTTCGCCTAACAGGGAATTTTTCTTATTAATATTAT
rJMFF007P24+ TTTCGCCTAACAGGGAATTTTTCTTATTAATATTAT
rJMFF041M07+ TTTCGCCTAACAGGGAATTTTTCTTATTAATATTATCAACCCTGTTAGCTCATTAGCCTT
                      ____________________________________________________________
consensus TTTCGCCTAACAGGGAATTTTTCTTATTAATATTATCAACCCTGTTAGCTCATTAGCCTT