| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023L23 | Sequence | 493 | 009204 (3) | ref|XP_010267678.1| | 186 | PREDICTED: uncharacterized protein LOC104604833 [Nelumbo nucifera] | 784 | 008305 (3) | ref|XP_004252023.1| | 380 | PREDICTED: uncharacterized protein LOC101252754 [Solanum lycopersicum] |
| JMFF041H06 | Sequence | 653 | 009204 (3) | ref|XP_011097895.1| | 185 | PREDICTED: uncharacterized protein LOC105176701 [Sesamum indicum] | 621 | 008305 (3) | ref|XP_004252023.1| | 280 | PREDICTED: uncharacterized protein LOC101252754 [Solanum lycopersicum] |
| JMSF008A06 | Sequence | 228 | 009204 (3) | ref|XP_010267678.1| | 61.6 | PREDICTED: uncharacterized protein LOC104604833 [Nelumbo nucifera] | 713 | 008305 (3) | ref|XP_004252023.1| | 378 | PREDICTED: uncharacterized protein LOC101252754 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF008A06+ TCTGCGTGCAGATCTCCGG
rJMFF023L23+ CCTCTGCGTGCAGATCTCCGG
____________________________________________________________
consensus CCTCTGCGTGCAGATCTCCGG
. : . : . : . : . : . :
rJMSF008A06+ GCCAAGTTCAATGAGACTGCTGCATGGGAATACGCTACAAACATGGATGGAGAACCTTAT
rJMFF023L23+ GCCAAGTTCAATGAGACTGCTGCATGGGAATACGCTACAAACATGGATGGAGAACCTTAT
____________________________________________________________
consensus GCCAAGTTCAATGAGACTGCTGCATGGGAATACGCTACAAACATGGATGGAGAACCTTAT
. : . : . : . : . : . :
rJMSF008A06+ GGTTATCATAACTTAATATTTAGCTGGATTGACACAAAAGATCAAAATTACCCTAAACCC
rJMFF023L23+ GGTTATCATAACTTAATATTTAGCTGGATTGACACAAAAGATCAAAATTACCCTAAACCC
____________________________________________________________
consensus GGTTATCATAACTTAATATTTAGCTGGATTGACACAAAAGATCAAAATTACCCTAAACCC
. : . : . : . : . : . :
rJMSF008A06+ TTGGATGCTCATCTGATTGCTTGTGCCATGACAATTTGGAATCATGTACGGCCTGCATAT
rJMFF023L23+ TTGGATGCTCATCTGATTGCTTGTGCCATGACAATTTGGAATCATGTACGGCCTGCATAT
rJMFF041H06+ AATCATGTACGGCCTGCATAT
____________________________________________________________
consensus TTGGATGCTCATCTGATTGCTTGTGCCATGACAATTTGGAATCATGTACGGCCTGCATAT
. : . : . : . : . : . :
rJMSF008A06+ GCTGCTAACCTGTGGAATGAAGCTCTAAACAAGCGGCTTGGAACTAAGGGCCTTGATCTC
rJMFF023L23+ GCTGCTAACCTGTGGAATGAAGCTCTAAACAAGCGGCTTGGAACTAAGGGCCTTGATCTC
rJMFF041H06+ GCTGCTAACCTGTGGAATGAAGCTCTAAACAAGCGGCTTGGAACTAAGGGCCTTGATCTC
____________________________________________________________
consensus GCTGCTAACCTGTGGAATGAAGCTCTAAACAAGCGGCTTGGAACTAAGGGCCTTGATCTC
. : . : . : . : . : . :
rJMSF008A06+ CCTGAAATTCTTGTGGAAGTTGAACGCCGTGGGTCATCTTTTGCGGAACTATTGACAATT
rJMFF023L23+ CCTGAAATTCTTGTGGAAGTTGAACGCCGTGGGTCATCTTTTGCGGAACTATTGACAATT
rJMFF041H06+ CCTGAAATTCTTGTGGAAGTTGAACGCCGTGGGTCATCTTTTGCGGAACTATTGACAATT
____________________________________________________________
consensus CCTGAAATTCTTGTGGAAGTTGAACGCCGTGGGTCATCTTTTGCGGAACTATTGACAATT
. : . : . : . : . : . :
rJMSF008A06+ CCAGAGCAGGATGATTGGGTTTACTCTAATGGGAGGTCCACATCATGTGTTGCTTTTGTT
rJMFF023L23+ CCAGAGCAGGATGATTGGGTTTACTCTAATGGGAGGTCCACATCATGTGTTGCTTTTGTT
rJMFF041H06+ CCAGAGCAGGATGATTGGGTTTACTCTAATGGGAGGTCCACATCATGTGTTGCTTTTGTT
____________________________________________________________
consensus CCAGAGCAGGATGATTGGGTTTACTCTAATGGGAGGTCCACATCATGTGTTGCTTTTGTT
. : . : . : . : . : . :
rJMSF008A06+ CTTCAAATGTACAAAGAAGCAGGACTATTTGGTCGACTAGCAAACTATATTCAAGTCACA
rJMFF023L23+ CTTCAAATGTACAAAGAAGCAGGACTATTTGGTCGACTAGCAAACTATATTCAAGTCACA
rJMFF041H06+ CTTCAAATGTACAAAGAAGCAGGACTATTTGGTCGACTAGCAAACTATATTCAAGTCACA
____________________________________________________________
consensus CTTCAAATGTACAAAGAAGCAGGACTATTTGGTCGACTAGCAAACTATATTCAAGTCACA
. : . : . : . : . : . :
rJMSF008A06+ GAGTTTACGATTAAAGACGCATACTCGTTGAAGATTTTTGAGGACGATACAAGGCGTTTA
rJMFF023L23+ GAGTTTACGATTAAAGACGCATACTCGTTGAAGATTTTTGAGGACGATACAAGGCGTTTA
rJMFF041H06+ GAGTTTACGATTAAAGACGCATACTCGTTGAAGATTTTTGAGGACGATACAAGGCGTTTA
____________________________________________________________
consensus GAGTTTACGATTAAAGACGCATACTCGTTGAAGATTTTTGAGGACGATACAAGGCGTTTA
. : . : . : . : . : . :
rJMSF008A06+ CCATTGTGGTGCAGTGAGGGGGACACAGAGGAACTTCCTTTCTGTCAACTTCGAGGAAAG
rJMFF023L23+ CCATTGTGGTGCAGTGAGGGGGACACAGAGGAACTTCCTTTCTGTCAACTTCGAGGAAAG
rJMFF041H06+ CCATTGTGGTGCAGTGAGGGGGACACAGAGGAACTTCCTTTCTGTCAACTTCGAGGAAAG
____________________________________________________________
consensus CCATTGTGGTGCAGTGAGGGGGACACAGAGGAACTTCCTTTCTGTCAACTTCGAGGAAAG
. : . : . : . : . : . :
rJMSF008A06+ TACAAGATGGAATTGCCCCATTACAATACCATAGAACCCTACGCTCATATGAATGAGAGA
rJMFF023L23+ TACAAGATGGAATTGCCCCATTACAATACCATAGAACCCTACGCTCATATGAATGAGAGA
rJMFF041H06+ TACAAGATGGAATTGCCCCATTACAATACCATAGAACCCTACGCTCATATGAATGAGAGA
____________________________________________________________
consensus TACAAGATGGAATTGCCCCATTACAATACCATAGAACCCTACGCTCATATGAATGAGAGA
. : . : . : . : . : . :
rJMSF008A06+ TGCCCGTCTATGCCTCCAAGATATTCCCGCCCAGAACGTTGCTGATCATCAACCTTTTTC
rJMFF023L23+ TGCCCGTCTATGCCTCCAAGATATTCCCGCCCAGAACGTTGCTGATCATCAACCTTTTTC
rJMFF041H06+ TGCCCGTCTATGCCTCCAAGATATTCCCGCCCAGAACGTTGCTGATCATCAACCTTTTTC
____________________________________________________________
consensus TGCCCGTCTATGCCTCCAAGATATTCCCGCCCAGAACGTTGCTGATCATCAACCTTTTTC
. : . : . : . : . : . :
rJMSF008A06+ TTTGCCAGCCTTGTGAGTGTAATTGGGCTATGCT
rJMFF023L23+ TTTGCCAGCCTTGTGAGTGTAATTGGGCTATGCTTCTTGTACGTTGGTACAGTGCCGCAA
rJMFF041H06+ TTTGCCAGCCTTGTGAGTGTAATTGGGCTATGCTTCTTGTACGTTGGTACAGTGCCGCAA
____________________________________________________________
consensus TTTGCCAGCCTTGTGAGTGTAATTGGGCTATGCTTCTTGTACGTTGGTACAGTGCCGCAA
. : . : . : . : . : . :
rJMFF023L23+ TAAGATTGTTTTTGTGATCGATGGTCGGATGTAGATCCCACAT
rJMFF041H06+ TAAGATTGTTTTTGTGATCGATGGTCGGATGTAGATCCCACATTTATGGCTAATTTCTAC
____________________________________________________________
consensus TAAGATTGTTTTTGTGATCGATGGTCGGATGTAGATCCCACATTTATGGCTAATTTCTAC